Experiment: D-Glucose (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS18005 and PFLU_RS18010 overlap by 4 nucleotides PFLU_RS18010 and PFLU_RS18015 are separated by 100 nucleotides PFLU_RS18015 and PFLU_RS18020 overlap by 4 nucleotides
PFLU_RS18005: PFLU_RS18005 - acyl-CoA/acyl-ACP dehydrogenase, at 4,085,366 to 4,086,544
_RS18005
PFLU_RS18010: PFLU_RS18010 - dihydrofolate reductase, at 4,086,541 to 4,087,485
_RS18010
PFLU_RS18015: PFLU_RS18015 - energy transducer TonB, at 4,087,586 to 4,088,359
_RS18015
PFLU_RS18020: PFLU_RS18020 - protein TolR, at 4,088,356 to 4,088,802
_RS18020
Position (kb) 4086
4087
4088 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 4085.648 kb on + strand, within PFLU_RS18005 at 4085.853 kb on - strand, within PFLU_RS18005 at 4086.137 kb on + strand, within PFLU_RS18005 at 4086.450 kb on + strand at 4086.450 kb on + strand at 4086.451 kb on - strand at 4086.581 kb on - strand at 4086.581 kb on - strand at 4086.686 kb on + strand, within PFLU_RS18010 at 4086.687 kb on - strand, within PFLU_RS18010 at 4086.716 kb on - strand, within PFLU_RS18010 at 4087.170 kb on + strand, within PFLU_RS18010 at 4087.225 kb on - strand, within PFLU_RS18010 at 4087.308 kb on - strand, within PFLU_RS18010 at 4087.345 kb on + strand, within PFLU_RS18010 at 4087.345 kb on + strand, within PFLU_RS18010 at 4087.345 kb on + strand, within PFLU_RS18010 at 4087.346 kb on - strand, within PFLU_RS18010 at 4087.346 kb on - strand, within PFLU_RS18010 at 4087.445 kb on - strand at 4087.445 kb on - strand at 4087.456 kb on - strand at 4087.587 kb on + strand at 4087.672 kb on + strand, within PFLU_RS18015 at 4087.672 kb on + strand, within PFLU_RS18015 at 4087.764 kb on + strand, within PFLU_RS18015 at 4087.764 kb on + strand, within PFLU_RS18015 at 4088.179 kb on + strand, within PFLU_RS18015 at 4088.180 kb on - strand, within PFLU_RS18015 at 4088.180 kb on - strand, within PFLU_RS18015 at 4088.465 kb on + strand, within PFLU_RS18020 at 4088.465 kb on + strand, within PFLU_RS18020 at 4088.466 kb on - strand, within PFLU_RS18020
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); with MOPS remove 4,085,648 + PFLU_RS18005 0.24 -0.1 4,085,853 - PFLU_RS18005 0.41 -1.4 4,086,137 + PFLU_RS18005 0.65 -0.6 4,086,450 + -2.1 4,086,450 + -0.1 4,086,451 - -0.1 4,086,581 - +0.6 4,086,581 - +0.3 4,086,686 + PFLU_RS18010 0.15 -1.0 4,086,687 - PFLU_RS18010 0.15 -0.0 4,086,716 - PFLU_RS18010 0.19 -0.1 4,087,170 + PFLU_RS18010 0.67 -0.2 4,087,225 - PFLU_RS18010 0.72 +1.1 4,087,308 - PFLU_RS18010 0.81 +0.4 4,087,345 + PFLU_RS18010 0.85 +0.5 4,087,345 + PFLU_RS18010 0.85 +0.6 4,087,345 + PFLU_RS18010 0.85 +0.5 4,087,346 - PFLU_RS18010 0.85 +0.4 4,087,346 - PFLU_RS18010 0.85 +0.7 4,087,445 - -0.0 4,087,445 - -0.6 4,087,456 - +0.8 4,087,587 + +0.0 4,087,672 + PFLU_RS18015 0.11 -2.8 4,087,672 + PFLU_RS18015 0.11 -0.1 4,087,764 + PFLU_RS18015 0.23 +1.1 4,087,764 + PFLU_RS18015 0.23 +1.4 4,088,179 + PFLU_RS18015 0.77 -0.2 4,088,180 - PFLU_RS18015 0.77 +1.5 4,088,180 - PFLU_RS18015 0.77 +0.7 4,088,465 + PFLU_RS18020 0.24 -2.5 4,088,465 + PFLU_RS18020 0.24 -2.9 4,088,466 - PFLU_RS18020 0.25 +0.2
Or see this region's nucleotide sequence