Experiment: D-Glucose (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS15975 and PFLU_RS15980 are separated by 85 nucleotides PFLU_RS15980 and PFLU_RS15985 overlap by 8 nucleotides PFLU_RS15985 and PFLU_RS15990 overlap by 8 nucleotides
PFLU_RS15975: PFLU_RS15975 - LuxR family transcriptional regulator, at 3,628,963 to 3,629,622
_RS15975
PFLU_RS15980: PFLU_RS15980 - molybdenum cofactor biosynthesis protein F, at 3,629,708 to 3,630,529
_RS15980
PFLU_RS15985: PFLU_RS15985 - SDR family oxidoreductase, at 3,630,522 to 3,631,322
_RS15985
PFLU_RS15990: PFLU_RS15990 - SDR family oxidoreductase, at 3,631,315 to 3,632,085
_RS15990
Position (kb)
3630
3631
3632 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3629.942 kb on + strand, within PFLU_RS15980 at 3630.215 kb on + strand, within PFLU_RS15980 at 3630.234 kb on - strand, within PFLU_RS15980 at 3630.245 kb on + strand, within PFLU_RS15980 at 3630.245 kb on + strand, within PFLU_RS15980 at 3630.246 kb on - strand, within PFLU_RS15980 at 3630.246 kb on - strand, within PFLU_RS15980 at 3630.263 kb on + strand, within PFLU_RS15980 at 3630.263 kb on + strand, within PFLU_RS15980 at 3630.263 kb on + strand, within PFLU_RS15980 at 3630.264 kb on - strand, within PFLU_RS15980 at 3630.264 kb on - strand, within PFLU_RS15980 at 3630.264 kb on - strand, within PFLU_RS15980 at 3630.323 kb on + strand, within PFLU_RS15980 at 3630.326 kb on + strand, within PFLU_RS15980 at 3630.326 kb on + strand, within PFLU_RS15980 at 3630.327 kb on - strand, within PFLU_RS15980 at 3630.327 kb on - strand, within PFLU_RS15980 at 3630.347 kb on + strand, within PFLU_RS15980 at 3630.347 kb on + strand, within PFLU_RS15980 at 3630.347 kb on + strand, within PFLU_RS15980 at 3630.348 kb on - strand, within PFLU_RS15980 at 3630.440 kb on + strand, within PFLU_RS15980 at 3630.536 kb on + strand at 3630.536 kb on + strand at 3630.858 kb on + strand, within PFLU_RS15985 at 3630.859 kb on - strand, within PFLU_RS15985 at 3631.064 kb on + strand, within PFLU_RS15985 at 3631.107 kb on + strand, within PFLU_RS15985 at 3631.108 kb on - strand, within PFLU_RS15985 at 3631.132 kb on - strand, within PFLU_RS15985 at 3631.293 kb on + strand at 3631.294 kb on - strand at 3631.294 kb on - strand at 3631.852 kb on + strand, within PFLU_RS15990 at 3632.026 kb on + strand at 3632.027 kb on - strand at 3632.027 kb on - strand at 3632.027 kb on - strand at 3632.051 kb on + strand at 3632.101 kb on - strand at 3632.148 kb on - strand at 3632.148 kb on - strand at 3632.299 kb on + strand at 3632.299 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); with MOPS remove 3,629,942 + PFLU_RS15980 0.28 +0.6 3,630,215 + PFLU_RS15980 0.62 -1.1 3,630,234 - PFLU_RS15980 0.64 -0.1 3,630,245 + PFLU_RS15980 0.65 -2.2 3,630,245 + PFLU_RS15980 0.65 +1.0 3,630,246 - PFLU_RS15980 0.65 +0.4 3,630,246 - PFLU_RS15980 0.65 -1.3 3,630,263 + PFLU_RS15980 0.68 -0.4 3,630,263 + PFLU_RS15980 0.68 +0.1 3,630,263 + PFLU_RS15980 0.68 -0.7 3,630,264 - PFLU_RS15980 0.68 +0.1 3,630,264 - PFLU_RS15980 0.68 +0.3 3,630,264 - PFLU_RS15980 0.68 -0.7 3,630,323 + PFLU_RS15980 0.75 -2.5 3,630,326 + PFLU_RS15980 0.75 -0.8 3,630,326 + PFLU_RS15980 0.75 +0.5 3,630,327 - PFLU_RS15980 0.75 +0.5 3,630,327 - PFLU_RS15980 0.75 +0.6 3,630,347 + PFLU_RS15980 0.78 +1.1 3,630,347 + PFLU_RS15980 0.78 -0.3 3,630,347 + PFLU_RS15980 0.78 -0.6 3,630,348 - PFLU_RS15980 0.78 -3.3 3,630,440 + PFLU_RS15980 0.89 +1.0 3,630,536 + +0.3 3,630,536 + +0.7 3,630,858 + PFLU_RS15985 0.42 +1.2 3,630,859 - PFLU_RS15985 0.42 +0.7 3,631,064 + PFLU_RS15985 0.68 -0.3 3,631,107 + PFLU_RS15985 0.73 +0.0 3,631,108 - PFLU_RS15985 0.73 +0.1 3,631,132 - PFLU_RS15985 0.76 -0.2 3,631,293 + +1.2 3,631,294 - +0.3 3,631,294 - +0.8 3,631,852 + PFLU_RS15990 0.70 -0.7 3,632,026 + -0.1 3,632,027 - +0.2 3,632,027 - -1.7 3,632,027 - +0.8 3,632,051 + +1.4 3,632,101 - +1.2 3,632,148 - +0.2 3,632,148 - -0.0 3,632,299 + -0.2 3,632,299 + +0.6
Or see this region's nucleotide sequence