Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS10800

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
2,377,606	+		PFLU_RS10790	0.32	-0.1
2,377,606	+		PFLU_RS10790	0.32	+0.8
2,377,606	+		PFLU_RS10790	0.32	-0.9
2,377,606	+		PFLU_RS10790	0.32	-0.0
2,377,606	+		PFLU_RS10790	0.32	-2.6
2,377,607	-		PFLU_RS10790	0.33	+1.9
2,377,607	-		PFLU_RS10790	0.33	-0.1
2,377,607	-		PFLU_RS10790	0.33	+0.3
2,377,646	+		PFLU_RS10790	0.46	-1.5
2,377,646	+		PFLU_RS10790	0.46	+0.8
2,377,646	+		PFLU_RS10790	0.46	+0.6
2,377,647	-		PFLU_RS10790	0.46	+0.3
2,377,647	-		PFLU_RS10790	0.46	+0.0
2,377,647	-		PFLU_RS10790	0.46	+0.8
2,377,737	+		PFLU_RS10790	0.76	+1.0
2,377,875	+				+0.9
2,377,875	+				-0.6
2,377,875	+				-0.3
2,377,875	+				+0.2
2,377,875	+				+0.2
2,377,876	-				-0.8
2,377,876	-				+0.8
2,377,907	-		PFLU_RS10795	0.14	+0.4
2,377,907	-		PFLU_RS10795	0.14	+1.3
2,377,907	-		PFLU_RS10795	0.14	-0.4
2,377,907	-		PFLU_RS10795	0.14	+1.3
2,377,907	-		PFLU_RS10795	0.14	-2.4
2,377,907	-		PFLU_RS10795	0.14	+0.4
2,377,982	+		PFLU_RS10795	0.26	+1.0
2,377,982	+		PFLU_RS10795	0.26	+1.3
2,377,982	+		PFLU_RS10795	0.26	-0.2
2,377,982	+		PFLU_RS10795	0.26	+0.3
2,377,982	+		PFLU_RS10795	0.26	+0.9
2,377,982	+		PFLU_RS10795	0.26	+1.0
2,377,983	-		PFLU_RS10795	0.26	+1.3
2,378,004	+		PFLU_RS10795	0.30	+0.9
2,378,004	+		PFLU_RS10795	0.30	+1.0
2,378,005	-		PFLU_RS10795	0.30	-0.8
2,378,022	-		PFLU_RS10795	0.33	+0.6
2,378,022	-		PFLU_RS10795	0.33	+0.8
2,378,022	-		PFLU_RS10795	0.33	-0.5
2,378,203	+		PFLU_RS10795	0.62	-0.4
2,378,203	+		PFLU_RS10795	0.62	-0.2
2,378,203	+		PFLU_RS10795	0.62	-0.0
2,378,204	-		PFLU_RS10795	0.62	+0.2
2,378,204	-		PFLU_RS10795	0.62	+1.1
2,378,204	-		PFLU_RS10795	0.62	-0.2
2,378,204	-		PFLU_RS10795	0.62	+1.5
2,378,204	-		PFLU_RS10795	0.62	-1.4
2,378,204	-		PFLU_RS10795	0.62	-1.7
2,378,204	-		PFLU_RS10795	0.62	+0.7
2,378,204	-		PFLU_RS10795	0.62	-1.4
2,378,204	-		PFLU_RS10795	0.62	-0.2
2,378,204	-		PFLU_RS10795	0.62	-0.0
2,378,204	-		PFLU_RS10795	0.62	+1.8
2,378,204	-		PFLU_RS10795	0.62	+1.0
2,378,213	-		PFLU_RS10795	0.63	+1.6
2,378,304	+		PFLU_RS10795	0.78	+0.2
2,378,304	+		PFLU_RS10795	0.78	+0.4
2,378,305	-		PFLU_RS10795	0.78	+0.3
2,378,305	-		PFLU_RS10795	0.78	-1.4
2,378,310	+		PFLU_RS10795	0.79	-1.1
2,378,310	+		PFLU_RS10795	0.79	-0.1
2,378,310	+		PFLU_RS10795	0.79	-0.4
2,378,311	-		PFLU_RS10795	0.79	-2.1
2,378,358	+		PFLU_RS10795	0.87	+0.9
2,378,403	+				-0.5
2,378,403	+				-0.0
2,378,403	+				-0.4
2,378,403	+				-1.3
2,378,403	+				+2.6
2,378,403	+				+0.6
2,378,404	-				+1.7
2,378,415	+				-0.9
2,378,415	+				+0.2
2,378,415	+				-0.3
2,378,415	+				+0.2
2,378,416	-				+0.5
2,378,416	-				-0.9
2,378,416	-				+1.6
2,378,416	-				-0.5
2,378,416	-				+0.8
2,378,416	-				-0.7
2,378,416	-				+1.4
2,378,416	-				+0.0
2,378,419	+				-0.3
2,378,419	+				+0.4
2,378,419	+				+2.9
2,378,419	+				+1.9
2,378,420	-				-2.0
2,378,420	-				-0.3
2,378,420	-				+0.0
2,378,420	-				-0.0
2,378,420	-				-0.5
2,378,420	-				+1.3
2,378,435	+				+0.3
2,378,435	+				-0.8
2,378,436	-				+0.6
2,378,436	-				-0.8
2,378,436	-				+0.6
2,378,622	+				+0.8
2,378,622	+				-0.6
2,378,725	+		PFLU_RS10800	0.18	-0.8
2,378,726	-		PFLU_RS10800	0.18	-1.3
2,378,747	-		PFLU_RS10800	0.19	-2.0
2,378,747	-		PFLU_RS10800	0.19	+0.3
2,378,747	-		PFLU_RS10800	0.19	-1.8
2,378,747	-		PFLU_RS10800	0.19	-0.4
2,378,877	-		PFLU_RS10800	0.29	+0.3
2,378,900	+		PFLU_RS10800	0.31	-0.0
2,378,900	+		PFLU_RS10800	0.31	-1.3
2,378,901	-		PFLU_RS10800	0.31	+0.0
2,378,959	+		PFLU_RS10800	0.36	+0.4
2,378,959	+		PFLU_RS10800	0.36	+0.3
2,378,959	+		PFLU_RS10800	0.36	-0.3
2,378,960	-		PFLU_RS10800	0.36	-0.4
2,378,960	-		PFLU_RS10800	0.36	-1.0
2,378,995	+		PFLU_RS10800	0.38	-1.4
2,378,995	+		PFLU_RS10800	0.38	-1.6
2,378,995	+		PFLU_RS10800	0.38	-0.3
2,378,995	+		PFLU_RS10800	0.38	-1.3
2,378,995	+		PFLU_RS10800	0.38	+0.6
2,378,995	+		PFLU_RS10800	0.38	-0.6
2,378,995	+		PFLU_RS10800	0.38	+0.6
2,378,995	+		PFLU_RS10800	0.38	-0.5
2,378,996	-		PFLU_RS10800	0.39	-2.0
2,378,996	-		PFLU_RS10800	0.39	-1.8
2,378,996	-		PFLU_RS10800	0.39	+1.0
2,378,996	-		PFLU_RS10800	0.39	-2.2
2,378,996	-		PFLU_RS10800	0.39	-0.4
2,378,996	-		PFLU_RS10800	0.39	+0.2
2,379,055	+		PFLU_RS10800	0.43	+1.2
2,379,055	+		PFLU_RS10800	0.43	-0.2
2,379,055	+		PFLU_RS10800	0.43	-2.9
2,379,056	-		PFLU_RS10800	0.43	+0.6
2,379,056	-		PFLU_RS10800	0.43	-0.5
2,379,059	-		PFLU_RS10800	0.43	-0.7
2,379,079	+		PFLU_RS10800	0.45	+1.4
2,379,080	-		PFLU_RS10800	0.45	+1.9
2,379,080	-		PFLU_RS10800	0.45	+0.6
2,379,080	-		PFLU_RS10800	0.45	-1.9
2,379,213	+		PFLU_RS10800	0.55	+1.1
2,379,214	-		PFLU_RS10800	0.55	+1.0
2,379,245	+		PFLU_RS10800	0.58	-1.0
2,379,245	+		PFLU_RS10800	0.58	-1.2
2,379,245	+		PFLU_RS10800	0.58	+0.3
2,379,246	-		PFLU_RS10800	0.58	-0.4
2,379,246	-		PFLU_RS10800	0.58	-0.2
2,379,246	-		PFLU_RS10800	0.58	+1.4
2,379,246	-		PFLU_RS10800	0.58	+0.6
2,379,246	-		PFLU_RS10800	0.58	-0.8
2,379,263	-		PFLU_RS10800	0.59	-0.5
2,379,263	-		PFLU_RS10800	0.59	-0.9
2,379,269	+		PFLU_RS10800	0.59	-1.3
2,379,270	-		PFLU_RS10800	0.60	-0.6
2,379,358	+		PFLU_RS10800	0.66	-1.4
2,379,359	-		PFLU_RS10800	0.66	-0.9
2,379,359	-		PFLU_RS10800	0.66	+1.0
2,379,377	+		PFLU_RS10800	0.68	-0.4
2,379,378	-		PFLU_RS10800	0.68	+0.4
2,379,379	+		PFLU_RS10800	0.68	+0.4
2,379,379	+		PFLU_RS10800	0.68	+1.3
2,379,379	+		PFLU_RS10800	0.68	+0.6
2,379,379	+		PFLU_RS10800	0.68	-1.4
2,379,379	+		PFLU_RS10800	0.68	+2.6
2,379,379	+		PFLU_RS10800	0.68	+1.4
2,379,380	-		PFLU_RS10800	0.68	+0.6
2,379,380	-		PFLU_RS10800	0.68	-1.4
2,379,380	-		PFLU_RS10800	0.68	-0.7
2,379,380	-		PFLU_RS10800	0.68	+0.4
2,379,380	-		PFLU_RS10800	0.68	-0.6
2,379,380	-		PFLU_RS10800	0.68	-2.4
2,379,380	-		PFLU_RS10800	0.68	-0.0
2,379,380	-		PFLU_RS10800	0.68	+1.6
2,379,393	+		PFLU_RS10800	0.69	+1.6
2,379,393	+		PFLU_RS10800	0.69	+0.1
2,379,393	+		PFLU_RS10800	0.69	-0.0
2,379,393	+		PFLU_RS10800	0.69	+0.3
2,379,393	+		PFLU_RS10800	0.69	-0.0
2,379,393	+		PFLU_RS10800	0.69	+0.1
2,379,393	+		PFLU_RS10800	0.69	+0.6
2,379,393	+		PFLU_RS10800	0.69	-0.7
2,379,393	+		PFLU_RS10800	0.69	-0.7
2,379,393	+		PFLU_RS10800	0.69	+0.9
2,379,393	+		PFLU_RS10800	0.69	+0.1
2,379,393	+		PFLU_RS10800	0.69	-0.7
2,379,393	+		PFLU_RS10800	0.69	-0.2
2,379,393	+		PFLU_RS10800	0.69	+0.5
2,379,393	+		PFLU_RS10800	0.69	-1.0
2,379,393	+		PFLU_RS10800	0.69	+1.9
2,379,393	+		PFLU_RS10800	0.69	+0.0
2,379,393	+		PFLU_RS10800	0.69	+3.1
2,379,394	-		PFLU_RS10800	0.69	+0.3
2,379,394	-		PFLU_RS10800	0.69	+0.6
2,379,394	-		PFLU_RS10800	0.69	-0.5
2,379,394	-		PFLU_RS10800	0.69	-0.7
2,379,394	-		PFLU_RS10800	0.69	+1.2
2,379,394	-		PFLU_RS10800	0.69	+0.6
2,379,394	-		PFLU_RS10800	0.69	-1.8
2,379,394	-		PFLU_RS10800	0.69	-0.8
2,379,394	-		PFLU_RS10800	0.69	-0.6
2,379,394	-		PFLU_RS10800	0.69	+1.0
2,379,394	-		PFLU_RS10800	0.69	-0.4
2,379,394	-		PFLU_RS10800	0.69	-0.1
2,379,394	-		PFLU_RS10800	0.69	+1.6
2,379,394	-		PFLU_RS10800	0.69	-0.8
2,379,394	-		PFLU_RS10800	0.69	-0.1
2,379,394	-		PFLU_RS10800	0.69	+1.3
2,379,394	-		PFLU_RS10800	0.69	-1.4
2,379,394	-		PFLU_RS10800	0.69	+1.6
2,379,487	+		PFLU_RS10800	0.76	+0.6
2,379,487	+		PFLU_RS10800	0.76	-0.2
2,379,487	+		PFLU_RS10800	0.76	+0.9
2,379,487	+		PFLU_RS10800	0.76	+1.1
2,379,488	-		PFLU_RS10800	0.76	+1.3
2,379,488	-		PFLU_RS10800	0.76	-0.4
2,379,488	-		PFLU_RS10800	0.76	-0.8
2,379,488	-		PFLU_RS10800	0.76	-0.6
2,379,488	-		PFLU_RS10800	0.76	+0.8
2,379,488	-		PFLU_RS10800	0.76	+0.1
2,379,488	-		PFLU_RS10800	0.76	+0.3
2,379,488	-		PFLU_RS10800	0.76	+0.9
2,379,514	+		PFLU_RS10800	0.78	-3.5
2,379,514	+		PFLU_RS10800	0.78	-0.5
2,379,515	-		PFLU_RS10800	0.78	-0.8
2,379,525	+		PFLU_RS10800	0.79	+0.4
2,379,565	+		PFLU_RS10800	0.82	+0.7
2,379,566	-		PFLU_RS10800	0.82	+0.7
2,379,566	-		PFLU_RS10800	0.82	-0.0
2,379,701	-				-0.0
2,379,701	-				-0.1
2,379,701	-				-1.8
2,379,733	-				+0.2
2,379,839	+				+0.9
2,379,839	+				-3.5
2,379,840	-				-0.2
2,379,840	-				+0.2
2,379,840	-				-0.0
2,379,840	-				+1.4
2,379,840	-				+1.0
2,379,840	-				+0.7
2,379,882	-		PFLU_RS10805	0.16	+0.4
2,379,883	+		PFLU_RS10805	0.16	-0.2
2,379,883	+		PFLU_RS10805	0.16	+1.5
2,379,883	+		PFLU_RS10805	0.16	-1.3
2,379,884	-		PFLU_RS10805	0.16	-0.1
2,379,925	+		PFLU_RS10805	0.25	+0.5
2,379,925	+		PFLU_RS10805	0.25	+0.1
2,379,926	-		PFLU_RS10805	0.25	+1.0
2,379,926	-		PFLU_RS10805	0.25	+0.3
2,379,980	-		PFLU_RS10805	0.37	-0.8
2,380,016	+		PFLU_RS10805	0.44	-1.6
2,380,016	+		PFLU_RS10805	0.44	+0.7
2,380,016	+		PFLU_RS10805	0.44	+0.3
2,380,018	+		PFLU_RS10805	0.45	+0.4
2,380,018	+		PFLU_RS10805	0.45	-1.5
2,380,018	+		PFLU_RS10805	0.45	+0.1
2,380,018	+		PFLU_RS10805	0.45	+0.2
2,380,018	+		PFLU_RS10805	0.45	+0.1
2,380,019	-		PFLU_RS10805	0.45	-1.5
2,380,019	-		PFLU_RS10805	0.45	-0.0
2,380,019	-		PFLU_RS10805	0.45	-0.9
2,380,019	-		PFLU_RS10805	0.45	+0.7
2,380,019	-		PFLU_RS10805	0.45	-0.5
2,380,027	+		PFLU_RS10805	0.47	+0.6
2,380,027	+		PFLU_RS10805	0.47	+1.7
2,380,120	+		PFLU_RS10805	0.67	+0.8
2,380,152	+		PFLU_RS10805	0.74	+1.8
2,380,153	-		PFLU_RS10805	0.74	-0.8
2,380,190	+		PFLU_RS10805	0.82	-0.1
2,380,202	+		PFLU_RS10805	0.84	-0.6
2,380,307	+				-0.4
2,380,308	+				-1.4
2,380,308	+				+0.8
2,380,308	+				-0.1
2,380,308	+				-1.0
2,380,308	+				+1.9
2,380,308	+				-0.3
2,380,308	+				-0.2
2,380,308	+				+0.1
2,380,308	+				-1.4
2,380,308	+				+0.1
2,380,308	+				+0.7
2,380,309	-				+0.8
2,380,309	-				-0.1
2,380,309	-				+0.8
2,380,309	-				-0.3
2,380,309	-				-1.5
2,380,309	-				+0.2
2,380,309	-				-3.4
2,380,309	-				+2.0
2,380,368	+				+0.1
2,380,414	+		PFLU_RS10810	0.11	-0.6
2,380,414	+		PFLU_RS10810	0.11	-2.8
2,380,415	-		PFLU_RS10810	0.11	+0.3
2,380,415	-		PFLU_RS10810	0.11	-0.0
2,380,461	+		PFLU_RS10810	0.14	+0.6
2,380,461	+		PFLU_RS10810	0.14	-1.9
2,380,461	+		PFLU_RS10810	0.14	-0.8
2,380,461	+		PFLU_RS10810	0.14	+0.0
2,380,462	-		PFLU_RS10810	0.14	-1.3
2,380,462	-		PFLU_RS10810	0.14	+0.9
2,380,496	+		PFLU_RS10810	0.17	-0.1
2,380,496	+		PFLU_RS10810	0.17	+0.2
2,380,497	-		PFLU_RS10810	0.17	+0.2
2,380,497	-		PFLU_RS10810	0.17	-0.7
2,380,524	+		PFLU_RS10810	0.19	-0.7
2,380,524	+		PFLU_RS10810	0.19	-0.3
2,380,578	-		PFLU_RS10810	0.23	+0.8
2,380,597	+		PFLU_RS10810	0.25	-0.2
2,380,744	-		PFLU_RS10810	0.36	-1.3
2,380,754	+		PFLU_RS10810	0.37	+0.5