Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS07970

Experiment: D-Glucose (C); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); with MOPS
1,774,579	+		PFLU_RS07960	0.45	+0.5
1,774,590	-		PFLU_RS07960	0.48	-1.8
1,774,626	+		PFLU_RS07960	0.58	+1.5
1,774,626	+		PFLU_RS07960	0.58	-1.9
1,774,626	+		PFLU_RS07960	0.58	+0.8
1,774,626	+		PFLU_RS07960	0.58	+0.2
1,774,626	+		PFLU_RS07960	0.58	-0.8
1,774,627	-		PFLU_RS07960	0.58	-1.0
1,774,627	-		PFLU_RS07960	0.58	-0.2
1,774,627	-		PFLU_RS07960	0.58	+0.8
1,774,770	+				+0.8
1,774,771	-				-1.1
1,774,786	+				+0.7
1,774,786	+				-0.9
1,774,786	+				+0.6
1,774,786	+				-0.2
1,774,787	-				+1.2
1,774,787	-				+0.5
1,774,787	-				-0.8
1,774,811	-				+0.1
1,774,811	-				-0.9
1,774,811	-				+1.2
1,774,851	+				-0.4
1,774,851	+				-0.8
1,774,851	+				-1.4
1,774,851	+				-0.2
1,774,851	+				-0.2
1,774,851	+				+0.9
1,774,852	-				-0.8
1,774,852	-				+1.6
1,774,852	-				+0.8
1,774,852	-				-0.9
1,774,913	+		PFLU_RS31460	0.44	-0.1
1,774,953	+		PFLU_RS31460	0.74	+0.8
1,774,953	+		PFLU_RS31460	0.74	+0.6
1,774,953	+		PFLU_RS31460	0.74	-0.1
1,774,953	+		PFLU_RS31460	0.74	-0.6
1,774,954	-		PFLU_RS31460	0.74	-1.5
1,774,954	-		PFLU_RS31460	0.74	-0.1
1,774,954	-		PFLU_RS31460	0.74	-1.6
1,774,958	+		PFLU_RS31460	0.77	-0.4
1,774,959	-		PFLU_RS31460	0.78	+0.9
1,774,959	-		PFLU_RS31460	0.78	+1.2
1,775,226	+				-0.1
1,775,226	+				-0.3
1,775,227	-				+0.8
1,775,227	-				-0.5
1,775,227	-				-0.6
1,775,247	+				-0.1
1,775,247	+				+1.3
1,775,248	-				+0.4
1,775,248	-				-0.3
1,775,248	-				+0.8
1,775,284	+				+1.0
1,775,298	+				+0.2
1,775,298	+				-0.2
1,775,298	+				+0.9
1,775,298	+				+0.9
1,775,298	+				-0.3
1,775,298	+				-0.1
1,775,299	-				+1.1
1,775,299	-				-1.9
1,775,299	-				+1.6
1,775,299	-				-0.4
1,775,299	-				+0.8
1,775,342	+				+0.4
1,775,342	+				-2.2
1,775,343	-				-2.1
1,775,343	-				+0.8
1,775,343	-				+0.4
1,775,390	+				-0.8
1,775,391	-				-0.7
1,775,391	-				-1.5
1,775,418	+				+0.7
1,775,514	+				+0.2
1,775,515	-				-0.6
1,775,546	+				+1.4
1,775,546	+				-0.9
1,775,546	+				-1.5
1,775,547	-				-0.3
1,775,547	-				-0.3
1,775,547	-				-0.8
1,775,596	+				-1.3
1,775,597	-				-0.8
1,775,597	-				-1.5
1,775,782	+		PFLU_RS07970	0.19	+0.4
1,775,782	+		PFLU_RS07970	0.19	-0.6
1,775,782	+		PFLU_RS07970	0.19	-2.1
1,775,782	+		PFLU_RS07970	0.19	-3.3
1,775,782	+		PFLU_RS07970	0.19	+0.1
1,775,782	+		PFLU_RS07970	0.19	-0.7
1,775,783	-		PFLU_RS07970	0.19	-2.6
1,775,783	-		PFLU_RS07970	0.19	+0.8
1,775,783	-		PFLU_RS07970	0.19	-0.1
1,775,783	-		PFLU_RS07970	0.19	+0.2
1,776,086	+		PFLU_RS07970	0.41	-0.8
1,776,087	-		PFLU_RS07970	0.41	-0.0
1,776,087	-		PFLU_RS07970	0.41	-0.1
1,776,267	+		PFLU_RS07970	0.55	+0.9
1,776,389	+		PFLU_RS07970	0.63	-2.0
1,776,389	+		PFLU_RS07970	0.63	-0.2
1,776,389	+		PFLU_RS07970	0.63	+0.0
1,776,389	+		PFLU_RS07970	0.63	-1.1
1,776,389	+		PFLU_RS07970	0.63	+0.4
1,776,389	+		PFLU_RS07970	0.63	-0.8
1,776,389	+		PFLU_RS07970	0.63	-0.3
1,776,389	+		PFLU_RS07970	0.63	-0.3
1,776,389	+		PFLU_RS07970	0.63	-1.0
1,776,389	+		PFLU_RS07970	0.63	-2.3
1,776,389	+		PFLU_RS07970	0.63	-0.8
1,776,389	+		PFLU_RS07970	0.63	-0.4
1,776,389	+		PFLU_RS07970	0.63	-1.5
1,776,389	+		PFLU_RS07970	0.63	-0.6
1,776,389	+		PFLU_RS07970	0.63	-1.6
1,776,389	+		PFLU_RS07970	0.63	-2.6
1,776,390	-		PFLU_RS07970	0.63	+0.6
1,776,390	-		PFLU_RS07970	0.63	-1.6
1,776,390	-		PFLU_RS07970	0.63	-1.2
1,776,390	-		PFLU_RS07970	0.63	-1.8
1,776,390	-		PFLU_RS07970	0.63	-1.1
1,776,390	-		PFLU_RS07970	0.63	-0.3
1,776,390	-		PFLU_RS07970	0.63	+0.6
1,776,390	-		PFLU_RS07970	0.63	-0.6
1,776,395	+		PFLU_RS07970	0.64	+0.7
1,776,395	+		PFLU_RS07970	0.64	-0.1
1,776,396	-		PFLU_RS07970	0.64	+0.9
1,776,396	-		PFLU_RS07970	0.64	+0.8
1,776,396	-		PFLU_RS07970	0.64	-2.1
1,776,396	-		PFLU_RS07970	0.64	-0.5
1,776,396	-		PFLU_RS07970	0.64	+0.1
1,776,396	-		PFLU_RS07970	0.64	+0.5
1,776,396	-		PFLU_RS07970	0.64	+0.8
1,776,396	-		PFLU_RS07970	0.64	-0.5
1,776,396	-		PFLU_RS07970	0.64	-0.9
1,776,396	-		PFLU_RS07970	0.64	+0.2
1,776,466	-		PFLU_RS07970	0.69	-1.3
1,776,466	-		PFLU_RS07970	0.69	-2.8
1,776,466	-		PFLU_RS07970	0.69	-0.1
1,776,494	+		PFLU_RS07970	0.71	-0.1
1,776,494	+		PFLU_RS07970	0.71	-2.5
1,776,494	+		PFLU_RS07970	0.71	-0.3
1,776,494	+		PFLU_RS07970	0.71	+0.6
1,776,495	-		PFLU_RS07970	0.71	-1.8
1,776,495	-		PFLU_RS07970	0.71	-0.0
1,776,495	-		PFLU_RS07970	0.71	+0.1
1,776,495	-		PFLU_RS07970	0.71	+0.7
1,776,495	-		PFLU_RS07970	0.71	-2.3
1,776,495	-		PFLU_RS07970	0.71	+0.6
1,776,495	-		PFLU_RS07970	0.71	-0.8
1,776,495	-		PFLU_RS07970	0.71	+0.9
1,776,495	-		PFLU_RS07970	0.71	-1.3
1,776,495	-		PFLU_RS07970	0.71	-0.8
1,776,495	-		PFLU_RS07970	0.71	-0.8
1,776,557	+		PFLU_RS07970	0.76	-1.9
1,776,557	+		PFLU_RS07970	0.76	-0.3
1,776,557	+		PFLU_RS07970	0.76	-0.8
1,776,557	+		PFLU_RS07970	0.76	-1.0
1,776,558	-		PFLU_RS07970	0.76	-2.3
1,776,699	+		PFLU_RS07970	0.86	-0.8
1,776,699	+		PFLU_RS07970	0.86	+0.4
1,776,699	+		PFLU_RS07970	0.86	-1.6
1,776,699	+		PFLU_RS07970	0.86	-2.8
1,776,699	+		PFLU_RS07970	0.86	-0.5
1,776,699	+		PFLU_RS07970	0.86	-1.6
1,776,699	+		PFLU_RS07970	0.86	-0.6
1,776,699	+		PFLU_RS07970	0.86	+1.8
1,776,699	+		PFLU_RS07970	0.86	+0.9
1,776,700	-		PFLU_RS07970	0.86	-0.3
1,776,700	-		PFLU_RS07970	0.86	-0.4
1,776,700	-		PFLU_RS07970	0.86	-0.3
1,776,701	+		PFLU_RS07970	0.86	+0.0
1,776,701	+		PFLU_RS07970	0.86	-1.6
1,776,701	+		PFLU_RS07970	0.86	-0.6
1,776,701	+		PFLU_RS07970	0.86	-0.5
1,776,702	-		PFLU_RS07970	0.86	+0.8
1,776,702	-		PFLU_RS07970	0.86	-1.2
1,776,702	-		PFLU_RS07970	0.86	-0.6
1,776,702	-		PFLU_RS07970	0.86	-0.0
1,776,782	+				+1.2
1,776,782	+				-1.7
1,776,782	+				-1.5
1,776,782	+				+0.0
1,776,782	+				-0.9
1,776,782	+				+0.7
1,776,782	+				+0.8
1,776,782	+				+1.0
1,776,782	+				-0.8
1,776,782	+				+1.5
1,776,782	+				-3.2
1,776,782	+				-1.8
1,776,782	+				-0.5
1,776,782	+				+1.3
1,776,782	+				-0.4
1,776,783	-				+0.5
1,776,783	-				-1.3
1,776,783	-				+0.7
1,776,783	-				+0.6
1,776,783	-				+0.4
1,776,783	-				-0.8
1,776,783	-				+0.6
1,776,783	-				+0.1
1,776,783	-				-1.9
1,776,783	-				+0.4
1,776,783	-				-0.6
1,776,982	+				-1.0
1,776,982	+				-1.3
1,776,982	+				+0.1
1,776,982	+				-1.3
1,776,982	+				-1.2
1,776,982	+				-1.4
1,776,983	-				+1.3
1,776,986	+				+1.0
1,776,986	+				-1.8
1,776,986	+				-0.6
1,776,986	+				-0.2
1,776,986	+				-0.7
1,776,986	+				+0.0
1,776,987	-				+0.7
1,776,987	-				-1.2
1,777,067	+				+0.2
1,777,068	-				-0.2
1,777,122	+				-0.2
1,777,173	-		PFLU_RS07975	0.16	-1.2
1,777,250	+		PFLU_RS07975	0.25	-0.8
1,777,250	+		PFLU_RS07975	0.25	-0.5
1,777,277	+		PFLU_RS07975	0.28	-0.6
1,777,277	+		PFLU_RS07975	0.28	+2.1
1,777,277	+		PFLU_RS07975	0.28	-1.2
1,777,277	+		PFLU_RS07975	0.28	-2.6
1,777,277	+		PFLU_RS07975	0.28	+0.5
1,777,277	+		PFLU_RS07975	0.28	-0.8
1,777,277	+		PFLU_RS07975	0.28	+0.9
1,777,277	+		PFLU_RS07975	0.28	+0.5
1,777,277	+		PFLU_RS07975	0.28	-0.2
1,777,278	-		PFLU_RS07975	0.29	-1.0
1,777,278	-		PFLU_RS07975	0.29	+0.7
1,777,278	-		PFLU_RS07975	0.29	+0.2
1,777,278	-		PFLU_RS07975	0.29	-0.1
1,777,278	-		PFLU_RS07975	0.29	+0.6
1,777,313	+		PFLU_RS07975	0.33	+0.8
1,777,313	+		PFLU_RS07975	0.33	-1.9
1,777,314	-		PFLU_RS07975	0.33	-0.1
1,777,314	-		PFLU_RS07975	0.33	-1.0
1,777,314	-		PFLU_RS07975	0.33	-0.5
1,777,314	-		PFLU_RS07975	0.33	-0.4
1,777,314	-		PFLU_RS07975	0.33	-1.0
1,777,460	+		PFLU_RS07975	0.51	-0.2
1,777,461	-		PFLU_RS07975	0.51	-0.5
1,777,461	-		PFLU_RS07975	0.51	+0.0
1,777,514	+		PFLU_RS07975	0.57	-0.6
1,777,515	-		PFLU_RS07975	0.57	-0.7
1,777,542	+		PFLU_RS07975	0.61	-0.8
1,777,604	+		PFLU_RS07975	0.68	+0.1
1,777,604	+		PFLU_RS07975	0.68	+0.7
1,777,604	+		PFLU_RS07975	0.68	-0.6
1,777,604	+		PFLU_RS07975	0.68	-0.0
1,777,605	-		PFLU_RS07975	0.68	+0.5
1,777,605	-		PFLU_RS07975	0.68	-0.1
1,777,605	-		PFLU_RS07975	0.68	+0.8
1,777,691	+		PFLU_RS07975	0.79	-0.3
1,777,691	+		PFLU_RS07975	0.79	+0.2
1,777,691	+		PFLU_RS07975	0.79	+1.4
1,777,691	+		PFLU_RS07975	0.79	-0.5
1,777,691	+		PFLU_RS07975	0.79	-2.3
1,777,692	-		PFLU_RS07975	0.79	-1.6
1,777,692	-		PFLU_RS07975	0.79	+1.0
1,777,715	+		PFLU_RS07975	0.82	-0.3
1,777,715	+		PFLU_RS07975	0.82	-0.8
1,777,715	+		PFLU_RS07975	0.82	-1.0
1,777,716	-		PFLU_RS07975	0.82	+1.8
1,777,716	-		PFLU_RS07975	0.82	-1.3
1,777,716	-		PFLU_RS07975	0.82	-1.3
1,777,739	+		PFLU_RS07975	0.84	-2.5
1,777,739	+		PFLU_RS07975	0.84	+0.3
1,777,739	+		PFLU_RS07975	0.84	-0.8
1,777,739	+		PFLU_RS07975	0.84	+1.2
1,777,739	+		PFLU_RS07975	0.84	+0.6
1,777,739	+		PFLU_RS07975	0.84	-0.4
1,777,740	-		PFLU_RS07975	0.85	-1.1
1,777,740	-		PFLU_RS07975	0.85	+0.4
1,777,740	-		PFLU_RS07975	0.85	-0.3
1,777,740	-		PFLU_RS07975	0.85	+0.3
1,777,846	-				-0.3
1,777,846	-				-1.2
1,777,860	+				-2.0
1,777,860	+				-2.4
1,777,860	+				+0.8
1,777,860	+				+0.7
1,777,860	+				+0.2
1,777,860	+				+0.2
1,777,860	+				-0.3
1,777,860	+				-0.9
1,777,861	-				+1.0
1,777,861	-				+0.2
1,777,861	-				+1.3
1,777,861	-				+0.8
1,777,861	-				+0.2
1,777,861	-				-0.0
1,777,861	-				-0.0
1,777,868	+				+0.3
1,777,868	+				-0.4
1,777,868	+				-0.7
1,777,869	-				-1.0
1,777,869	-				-2.1
1,777,869	-				-1.7
1,777,869	-				-0.0
1,777,869	-				-1.2
1,777,869	-				+1.8