Experiment: D-Glucose (C); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS00625 and PFLU_RS00630 are separated by 372 nucleotides PFLU_RS00630 and PFLU_RS00635 are separated by 311 nucleotides
PFLU_RS00625: PFLU_RS00625 - DUF3050 domain-containing protein, at 132,325 to 133,092
_RS00625
PFLU_RS00630: PFLU_RS00630 - GntR family transcriptional regulator, at 133,465 to 134,163
_RS00630
PFLU_RS00635: PFLU_RS00635 - TauD/TfdA family dioxygenase, at 134,475 to 135,368
_RS00635
Position (kb) 133
134
135 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 132.522 kb on - strand, within PFLU_RS00625 at 132.535 kb on - strand, within PFLU_RS00625 at 132.562 kb on - strand, within PFLU_RS00625 at 132.595 kb on + strand, within PFLU_RS00625 at 132.649 kb on + strand, within PFLU_RS00625 at 132.697 kb on + strand, within PFLU_RS00625 at 132.697 kb on + strand, within PFLU_RS00625 at 132.698 kb on - strand, within PFLU_RS00625 at 132.750 kb on + strand, within PFLU_RS00625 at 132.751 kb on - strand, within PFLU_RS00625 at 132.751 kb on - strand, within PFLU_RS00625 at 132.751 kb on - strand, within PFLU_RS00625 at 132.751 kb on - strand, within PFLU_RS00625 at 132.753 kb on + strand, within PFLU_RS00625 at 132.753 kb on + strand, within PFLU_RS00625 at 132.753 kb on + strand, within PFLU_RS00625 at 132.754 kb on - strand, within PFLU_RS00625 at 132.754 kb on - strand, within PFLU_RS00625 at 132.807 kb on - strand, within PFLU_RS00625 at 132.825 kb on + strand, within PFLU_RS00625 at 132.826 kb on - strand, within PFLU_RS00625 at 132.826 kb on - strand, within PFLU_RS00625 at 132.826 kb on - strand, within PFLU_RS00625 at 132.826 kb on - strand, within PFLU_RS00625 at 132.826 kb on - strand, within PFLU_RS00625 at 132.827 kb on + strand, within PFLU_RS00625 at 132.828 kb on - strand, within PFLU_RS00625 at 132.828 kb on - strand, within PFLU_RS00625 at 132.828 kb on - strand, within PFLU_RS00625 at 132.985 kb on + strand, within PFLU_RS00625 at 132.985 kb on + strand, within PFLU_RS00625 at 132.985 kb on + strand, within PFLU_RS00625 at 132.986 kb on - strand, within PFLU_RS00625 at 133.103 kb on + strand at 133.104 kb on - strand at 133.105 kb on + strand at 133.163 kb on + strand at 133.163 kb on + strand at 133.163 kb on + strand at 133.164 kb on - strand at 133.198 kb on - strand at 133.248 kb on - strand at 133.251 kb on - strand at 133.277 kb on + strand at 133.308 kb on + strand at 133.309 kb on - strand at 133.322 kb on - strand at 133.334 kb on - strand at 133.368 kb on - strand at 133.372 kb on + strand at 133.466 kb on + strand at 133.466 kb on + strand at 133.466 kb on + strand at 133.466 kb on + strand at 133.466 kb on + strand at 133.466 kb on + strand at 133.467 kb on - strand at 133.467 kb on - strand at 133.496 kb on + strand at 133.497 kb on - strand at 133.497 kb on - strand at 133.497 kb on - strand at 133.497 kb on - strand at 133.760 kb on + strand, within PFLU_RS00630 at 133.760 kb on + strand, within PFLU_RS00630 at 133.760 kb on + strand, within PFLU_RS00630 at 133.761 kb on - strand, within PFLU_RS00630 at 133.761 kb on - strand, within PFLU_RS00630 at 133.761 kb on - strand, within PFLU_RS00630 at 133.790 kb on + strand, within PFLU_RS00630 at 133.790 kb on + strand, within PFLU_RS00630 at 133.790 kb on + strand, within PFLU_RS00630 at 133.790 kb on + strand, within PFLU_RS00630 at 133.790 kb on + strand, within PFLU_RS00630 at 133.790 kb on + strand, within PFLU_RS00630 at 133.790 kb on + strand, within PFLU_RS00630 at 133.790 kb on + strand, within PFLU_RS00630 at 133.790 kb on + strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.791 kb on - strand, within PFLU_RS00630 at 133.795 kb on - strand, within PFLU_RS00630 at 133.795 kb on - strand, within PFLU_RS00630 at 133.795 kb on - strand, within PFLU_RS00630 at 133.877 kb on + strand, within PFLU_RS00630 at 133.877 kb on + strand, within PFLU_RS00630 at 133.877 kb on + strand, within PFLU_RS00630 at 133.877 kb on + strand, within PFLU_RS00630 at 133.877 kb on + strand, within PFLU_RS00630 at 133.877 kb on + strand, within PFLU_RS00630 at 133.877 kb on + strand, within PFLU_RS00630 at 133.877 kb on + strand, within PFLU_RS00630 at 133.877 kb on + strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 133.878 kb on - strand, within PFLU_RS00630 at 134.037 kb on + strand, within PFLU_RS00630 at 134.089 kb on + strand, within PFLU_RS00630 at 134.090 kb on - strand, within PFLU_RS00630 at 134.090 kb on - strand, within PFLU_RS00630 at 134.167 kb on + strand at 134.172 kb on + strand at 134.181 kb on + strand at 134.181 kb on + strand at 134.181 kb on + strand at 134.181 kb on + strand at 134.182 kb on - strand at 134.182 kb on - strand at 134.184 kb on + strand at 134.184 kb on + strand at 134.184 kb on + strand at 134.184 kb on + strand at 134.185 kb on - strand at 134.185 kb on - strand at 134.185 kb on - strand at 134.185 kb on - strand at 134.185 kb on - strand at 134.219 kb on + strand at 134.219 kb on + strand at 134.219 kb on + strand at 134.220 kb on - strand at 134.220 kb on - strand at 134.220 kb on - strand at 134.220 kb on - strand at 134.220 kb on - strand at 134.265 kb on + strand at 134.265 kb on + strand at 134.265 kb on + strand at 134.265 kb on + strand at 134.265 kb on + strand at 134.266 kb on - strand at 134.266 kb on - strand at 134.266 kb on - strand at 134.318 kb on + strand at 134.318 kb on + strand at 134.318 kb on + strand at 134.319 kb on - strand at 134.346 kb on + strand at 134.346 kb on + strand at 134.347 kb on - strand at 134.347 kb on - strand at 134.347 kb on - strand at 134.397 kb on + strand at 134.398 kb on - strand at 134.432 kb on + strand at 134.433 kb on - strand at 134.433 kb on - strand at 134.439 kb on - strand at 134.490 kb on - strand at 134.490 kb on - strand at 134.490 kb on - strand at 134.841 kb on + strand, within PFLU_RS00635 at 134.841 kb on + strand, within PFLU_RS00635 at 134.841 kb on + strand, within PFLU_RS00635 at 134.841 kb on + strand, within PFLU_RS00635 at 134.841 kb on + strand, within PFLU_RS00635 at 134.842 kb on - strand, within PFLU_RS00635 at 134.842 kb on - strand, within PFLU_RS00635 at 134.843 kb on + strand, within PFLU_RS00635 at 134.844 kb on - strand, within PFLU_RS00635 at 134.844 kb on - strand, within PFLU_RS00635 at 134.994 kb on + strand, within PFLU_RS00635 at 134.994 kb on + strand, within PFLU_RS00635 at 134.994 kb on + strand, within PFLU_RS00635 at 134.994 kb on + strand, within PFLU_RS00635 at 134.994 kb on + strand, within PFLU_RS00635 at 134.995 kb on - strand, within PFLU_RS00635 at 134.995 kb on - strand, within PFLU_RS00635
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); with MOPS remove 132,522 - PFLU_RS00625 0.26 -0.8 132,535 - PFLU_RS00625 0.27 -0.7 132,562 - PFLU_RS00625 0.31 -0.9 132,595 + PFLU_RS00625 0.35 -1.2 132,649 + PFLU_RS00625 0.42 -0.9 132,697 + PFLU_RS00625 0.48 +0.9 132,697 + PFLU_RS00625 0.48 -0.0 132,698 - PFLU_RS00625 0.49 +0.6 132,750 + PFLU_RS00625 0.55 -0.2 132,751 - PFLU_RS00625 0.55 -0.2 132,751 - PFLU_RS00625 0.55 -0.6 132,751 - PFLU_RS00625 0.55 -0.5 132,751 - PFLU_RS00625 0.55 +0.2 132,753 + PFLU_RS00625 0.56 +0.3 132,753 + PFLU_RS00625 0.56 -0.4 132,753 + PFLU_RS00625 0.56 -0.8 132,754 - PFLU_RS00625 0.56 +0.2 132,754 - PFLU_RS00625 0.56 +0.4 132,807 - PFLU_RS00625 0.63 +0.3 132,825 + PFLU_RS00625 0.65 -2.4 132,826 - PFLU_RS00625 0.65 -0.4 132,826 - PFLU_RS00625 0.65 -1.1 132,826 - PFLU_RS00625 0.65 +0.8 132,826 - PFLU_RS00625 0.65 -0.3 132,826 - PFLU_RS00625 0.65 +0.0 132,827 + PFLU_RS00625 0.65 +2.3 132,828 - PFLU_RS00625 0.65 -1.3 132,828 - PFLU_RS00625 0.65 -0.2 132,828 - PFLU_RS00625 0.65 -0.2 132,985 + PFLU_RS00625 0.86 -0.2 132,985 + PFLU_RS00625 0.86 +1.7 132,985 + PFLU_RS00625 0.86 +2.7 132,986 - PFLU_RS00625 0.86 -0.2 133,103 + -2.1 133,104 - +0.8 133,105 + -0.1 133,163 + +1.7 133,163 + -1.4 133,163 + +0.0 133,164 - +0.4 133,198 - -0.0 133,248 - -0.2 133,251 - +0.9 133,277 + -1.1 133,308 + -1.8 133,309 - +1.2 133,322 - -0.2 133,334 - -2.4 133,368 - +0.2 133,372 + +1.2 133,466 + +0.0 133,466 + +0.4 133,466 + +0.2 133,466 + +0.6 133,466 + -0.1 133,466 + -0.2 133,467 - +0.0 133,467 - -0.1 133,496 + -1.2 133,497 - +0.4 133,497 - -1.8 133,497 - -0.5 133,497 - +0.4 133,760 + PFLU_RS00630 0.42 +0.8 133,760 + PFLU_RS00630 0.42 -0.2 133,760 + PFLU_RS00630 0.42 -0.9 133,761 - PFLU_RS00630 0.42 -2.3 133,761 - PFLU_RS00630 0.42 -0.5 133,761 - PFLU_RS00630 0.42 -1.0 133,790 + PFLU_RS00630 0.46 +0.6 133,790 + PFLU_RS00630 0.46 -0.3 133,790 + PFLU_RS00630 0.46 +0.7 133,790 + PFLU_RS00630 0.46 -1.8 133,790 + PFLU_RS00630 0.46 +0.5 133,790 + PFLU_RS00630 0.46 -0.2 133,790 + PFLU_RS00630 0.46 -0.5 133,790 + PFLU_RS00630 0.46 -1.3 133,790 + PFLU_RS00630 0.46 -0.4 133,791 - PFLU_RS00630 0.47 +0.2 133,791 - PFLU_RS00630 0.47 -0.4 133,791 - PFLU_RS00630 0.47 +0.2 133,791 - PFLU_RS00630 0.47 +0.3 133,791 - PFLU_RS00630 0.47 +0.2 133,791 - PFLU_RS00630 0.47 -0.5 133,791 - PFLU_RS00630 0.47 +0.6 133,791 - PFLU_RS00630 0.47 -1.2 133,791 - PFLU_RS00630 0.47 -0.2 133,791 - PFLU_RS00630 0.47 +0.9 133,791 - PFLU_RS00630 0.47 -0.5 133,791 - PFLU_RS00630 0.47 -1.4 133,795 - PFLU_RS00630 0.47 -0.5 133,795 - PFLU_RS00630 0.47 -1.2 133,795 - PFLU_RS00630 0.47 -0.6 133,877 + PFLU_RS00630 0.59 +0.0 133,877 + PFLU_RS00630 0.59 -0.3 133,877 + PFLU_RS00630 0.59 +0.5 133,877 + PFLU_RS00630 0.59 -0.0 133,877 + PFLU_RS00630 0.59 +0.6 133,877 + PFLU_RS00630 0.59 -0.4 133,877 + PFLU_RS00630 0.59 -0.0 133,877 + PFLU_RS00630 0.59 +1.5 133,877 + PFLU_RS00630 0.59 -2.2 133,878 - PFLU_RS00630 0.59 -0.4 133,878 - PFLU_RS00630 0.59 +1.9 133,878 - PFLU_RS00630 0.59 +0.7 133,878 - PFLU_RS00630 0.59 +0.3 133,878 - PFLU_RS00630 0.59 +0.3 133,878 - PFLU_RS00630 0.59 -1.3 133,878 - PFLU_RS00630 0.59 -1.0 133,878 - PFLU_RS00630 0.59 -0.2 133,878 - PFLU_RS00630 0.59 -0.4 133,878 - PFLU_RS00630 0.59 +0.6 133,878 - PFLU_RS00630 0.59 +0.0 133,878 - PFLU_RS00630 0.59 -1.5 134,037 + PFLU_RS00630 0.82 +1.6 134,089 + PFLU_RS00630 0.89 -1.0 134,090 - PFLU_RS00630 0.89 -0.3 134,090 - PFLU_RS00630 0.89 +0.8 134,167 + -0.3 134,172 + -1.2 134,181 + -1.1 134,181 + +0.5 134,181 + +0.2 134,181 + -0.9 134,182 - -0.1 134,182 - +1.2 134,184 + -1.4 134,184 + -1.6 134,184 + +0.2 134,184 + +0.6 134,185 - -0.5 134,185 - -2.4 134,185 - -2.5 134,185 - -0.0 134,185 - -3.0 134,219 + -1.6 134,219 + -1.6 134,219 + +0.7 134,220 - -1.2 134,220 - +0.1 134,220 - -1.3 134,220 - -0.3 134,220 - +1.4 134,265 + -1.2 134,265 + -3.1 134,265 + -0.7 134,265 + -0.6 134,265 + -0.2 134,266 - +3.0 134,266 - -0.1 134,266 - +0.3 134,318 + -0.2 134,318 + -0.2 134,318 + +0.5 134,319 - -0.2 134,346 + +0.1 134,346 + -0.1 134,347 - -0.9 134,347 - -0.2 134,347 - +0.6 134,397 + +0.2 134,398 - -0.5 134,432 + -0.7 134,433 - -0.1 134,433 - +0.3 134,439 - -2.2 134,490 - +0.0 134,490 - +0.3 134,490 - -0.8 134,841 + PFLU_RS00635 0.41 -1.3 134,841 + PFLU_RS00635 0.41 +0.5 134,841 + PFLU_RS00635 0.41 +1.5 134,841 + PFLU_RS00635 0.41 +0.4 134,841 + PFLU_RS00635 0.41 +0.3 134,842 - PFLU_RS00635 0.41 -0.4 134,842 - PFLU_RS00635 0.41 +0.5 134,843 + PFLU_RS00635 0.41 -0.1 134,844 - PFLU_RS00635 0.41 -0.6 134,844 - PFLU_RS00635 0.41 +1.2 134,994 + PFLU_RS00635 0.58 -0.4 134,994 + PFLU_RS00635 0.58 -0.1 134,994 + PFLU_RS00635 0.58 -0.3 134,994 + PFLU_RS00635 0.58 +1.5 134,994 + PFLU_RS00635 0.58 -0.1 134,995 - PFLU_RS00635 0.58 -0.2 134,995 - PFLU_RS00635 0.58 +0.6
Or see this region's nucleotide sequence