Strain Fitness in Pseudomonas sp. S08-1 around OH686_22870

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
4,639,308	+				-2.2
4,639,308	+				-0.4
4,639,309	-				+0.2
4,639,313	+				-0.8
4,639,313	+				-0.4
4,639,314	-				+1.7
4,639,353	+		OH686_22870	0.13	-0.4
4,639,353	+		OH686_22870	0.13	-0.4
4,639,353	+		OH686_22870	0.13	-1.3
4,639,354	-		OH686_22870	0.13	-0.6
4,639,354	-		OH686_22870	0.13	+0.2
4,639,373	+		OH686_22870	0.19	+0.2
4,639,374	-		OH686_22870	0.20	-2.8
4,639,589	-				-2.1
4,639,589	-				-1.2
4,639,596	+				-2.4
4,639,596	+				-1.9
4,639,596	+				-0.0
4,639,596	+				-1.2
4,639,596	+				-2.5
4,639,596	+				-1.5
4,639,596	+				-2.8
4,639,596	+				-1.8
4,639,596	+				-0.4
4,639,596	+				-2.4
4,639,596	+				-3.1
4,639,596	+				-0.7
4,639,596	+				-3.5
4,639,597	-				-3.0
4,639,597	-				+0.6
4,639,597	-				-2.0
4,639,597	-				-2.2
4,639,597	-				+0.2
4,639,597	-				-1.7
4,639,597	-				-2.5
4,639,597	-				-2.5
4,639,597	-				-3.3
4,639,597	-				-1.9
4,639,597	-				-1.3
4,639,597	-				-1.1
4,639,614	+				+0.2
4,639,633	-		OH686_22875	0.10	-2.3
4,639,648	+		OH686_22875	0.14	+1.6
4,639,649	-		OH686_22875	0.15	-1.2
4,639,649	-		OH686_22875	0.15	-0.6
4,639,649	-		OH686_22875	0.15	-0.6
4,639,649	-		OH686_22875	0.15	+0.2
4,639,762	+		OH686_22875	0.46	-2.4
4,639,763	-		OH686_22875	0.46	-1.6
4,639,765	+		OH686_22875	0.47	+1.2
4,639,765	+		OH686_22875	0.47	+0.2
4,639,765	+		OH686_22875	0.47	-0.6
4,639,766	-		OH686_22875	0.47	-0.2
4,639,766	-		OH686_22875	0.47	-1.5
4,639,766	-		OH686_22875	0.47	-0.6
4,639,766	-		OH686_22875	0.47	-0.4
4,639,766	-		OH686_22875	0.47	-0.2
4,639,813	+		OH686_22875	0.61	-1.0
4,639,813	+		OH686_22875	0.61	+1.7
4,639,814	-		OH686_22875	0.61	-0.6
4,639,814	-		OH686_22875	0.61	+0.4
4,639,889	-		OH686_22875	0.82	-1.2
4,639,889	-		OH686_22875	0.82	-1.3
4,639,889	-		OH686_22875	0.82	-1.0
4,639,889	-		OH686_22875	0.82	-1.0
4,639,937	+				-0.5
4,639,951	+				+0.2
4,639,951	+				-1.3
4,639,951	+				+0.4
4,639,951	+				-0.2
4,639,951	+				-0.2
4,639,951	+				-3.3
4,639,951	+				-3.1
4,639,951	+				+0.4
4,639,951	+				+0.3
4,639,952	-				-3.4
4,639,952	-				+0.0
4,639,952	-				-0.4
4,639,994	-				-0.0
4,640,259	+				-0.8
4,640,259	+				-0.9
4,640,260	-				+0.9
4,640,260	-				-2.6
4,640,291	+				-3.3
4,640,292	-				+1.7
4,640,308	+				-0.5
4,640,308	+				-0.2
4,640,308	+				+0.0
4,640,308	+				+1.0
4,640,308	+				+1.9
4,640,308	+				-1.2
4,640,308	+				+1.1
4,640,308	+				+1.8
4,640,308	+				+0.8
4,640,308	+				+0.4
4,640,308	+				-1.3
4,640,308	+				-2.7
4,640,308	+				+0.2
4,640,308	+				+0.9
4,640,308	+				+0.7
4,640,308	+				-1.2
4,640,308	+				-1.9
4,640,308	+				+0.6
4,640,308	+				+2.3
4,640,308	+				+0.2
4,640,308	+				+1.3
4,640,308	+				-1.6
4,640,308	+				+0.9
4,640,308	+				+0.8
4,640,309	-				-1.0
4,640,309	-				+1.5
4,640,309	-				-0.4
4,640,309	-				-0.6
4,640,309	-				+0.2
4,640,309	-				-0.3
4,640,309	-				-0.2
4,640,309	-				+1.2
4,640,309	-				-1.9
4,640,309	-				-0.7
4,640,309	-				+1.3
4,640,309	-				-3.3
4,640,309	-				-0.2
4,640,309	-				-3.6
4,640,309	-				-0.1
4,640,309	-				-0.8
4,640,309	-				-1.3
4,640,309	-				-2.3
4,640,309	-				-1.7
4,640,309	-				-3.4
4,640,310	+				-1.5
4,640,310	+				+1.2
4,640,310	+				-1.2
4,640,310	+				-1.7
4,640,310	+				+2.2
4,640,310	+				-0.3
4,640,310	+				+1.2
4,640,310	+				-0.1
4,640,310	+				+1.4
4,640,310	+				+1.5
4,640,310	+				+1.6
4,640,310	+				+1.0
4,640,310	+				-0.8
4,640,310	+				-2.2
4,640,310	+				-1.7
4,640,310	+				-1.2
4,640,310	+				-1.8
4,640,310	+				+1.9
4,640,310	+				-1.0
4,640,310	+				-1.3
4,640,310	+				+0.6
4,640,310	+				-0.9
4,640,310	+				+0.4
4,640,311	-				+1.1
4,640,311	-				-2.8
4,640,311	-				-1.4
4,640,311	-				+0.2
4,640,311	-				-1.8
4,640,311	-				-2.1
4,640,311	-				+0.7
4,640,311	-				-0.6
4,640,311	-				+0.8
4,640,311	-				-2.0
4,640,311	-				-2.8
4,640,311	-				+0.2
4,640,311	-				+0.8
4,640,311	-				-0.4
4,640,345	+				-0.7
4,640,345	+				+0.6
4,640,345	+				-0.2
4,640,346	-				-2.2
4,640,353	+				-1.6
4,640,354	-				-0.0
4,640,354	-				-0.3
4,640,354	-				+0.1
4,640,391	+				+1.1
4,640,392	-				+0.9
4,640,392	-				+0.4
4,640,401	+				-0.4
4,640,401	+				-1.2
4,640,402	-				-0.6
4,640,402	-				-2.6
4,640,411	+				+0.6
4,640,411	+				+2.2
4,640,411	+				-0.6
4,640,411	+				+0.7
4,640,412	-				-1.5
4,640,412	-				-0.6
4,640,412	-				-0.2
4,640,412	-				+0.3
4,640,412	-				+0.0
4,640,412	-				-0.2
4,640,412	-				-2.0
4,640,412	-				+1.3
4,640,415	+				-0.5
4,640,416	-				+2.3
4,640,416	-				+1.5
4,640,416	-				+1.8
4,640,416	-				-3.0
4,640,421	+				-2.4
4,640,421	+				-1.2
4,640,421	+				+0.4
4,640,421	+				-2.2
4,640,421	+				-0.6
4,640,421	+				+1.2
4,640,421	+				-2.4
4,640,421	+				-0.9
4,640,421	+				-2.8
4,640,421	+				+0.4
4,640,421	+				-1.0
4,640,422	-				+2.4
4,640,422	-				+0.8
4,640,422	-				-0.2
4,640,422	-				+1.8
4,640,422	-				-1.4
4,640,422	-				+1.2
4,640,422	-				+0.1
4,640,422	-				+0.7
4,640,436	+				-1.6
4,640,436	+				-2.4
4,640,436	+				-0.7
4,640,437	-				-2.0
4,640,437	-				-2.1
4,640,437	-				-0.0
4,640,437	-				-1.9
4,640,441	+				+0.5
4,640,441	+				-2.6
4,640,441	+				-1.0
4,640,441	+				-2.0
4,640,441	+				-1.2
4,640,441	+				+1.1
4,640,442	-				-3.2
4,640,443	+				-0.6
4,640,443	+				+2.8
4,640,443	+				-0.3
4,640,443	+				+1.5
4,640,544	+		OH686_22885	0.11	-3.0
4,640,544	+		OH686_22885	0.11	-1.8
4,640,544	+		OH686_22885	0.11	-2.8
4,640,544	+		OH686_22885	0.11	+0.8
4,640,544	+		OH686_22885	0.11	-0.9
4,640,544	+		OH686_22885	0.11	+0.8
4,640,544	+		OH686_22885	0.11	+1.5
4,640,544	+		OH686_22885	0.11	+0.1
4,640,544	+		OH686_22885	0.11	-0.0
4,640,544	+		OH686_22885	0.11	+0.6
4,640,544	+		OH686_22885	0.11	+0.7
4,640,544	+		OH686_22885	0.11	-3.7
4,640,545	-		OH686_22885	0.11	+0.4
4,640,545	-		OH686_22885	0.11	+0.7
4,640,545	-		OH686_22885	0.11	-3.9
4,640,545	-		OH686_22885	0.11	+2.8
4,640,545	-		OH686_22885	0.11	+0.0
4,640,545	-		OH686_22885	0.11	-0.6
4,640,545	-		OH686_22885	0.11	-1.4
4,640,545	-		OH686_22885	0.11	+1.1
4,640,545	-		OH686_22885	0.11	-2.3
4,640,545	-		OH686_22885	0.11	-2.7
4,640,545	-		OH686_22885	0.11	-2.7
4,640,545	-		OH686_22885	0.11	-2.7
4,640,605	+		OH686_22885	0.16	+1.2
4,640,605	+		OH686_22885	0.16	-2.5
4,640,605	+		OH686_22885	0.16	+0.5
4,640,605	+		OH686_22885	0.16	-2.5
4,640,605	+		OH686_22885	0.16	+1.3
4,640,605	+		OH686_22885	0.16	+1.7
4,640,606	-		OH686_22885	0.16	-1.2
4,640,606	-		OH686_22885	0.16	+0.3
4,640,606	-		OH686_22885	0.16	-0.3
4,640,606	-		OH686_22885	0.16	-1.9