Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_22555 and OH686_22560 are separated by 95 nucleotides OH686_22560 and OH686_22565 are separated by 124 nucleotides OH686_22565 and OH686_22570 are separated by 88 nucleotides OH686_22570 and OH686_22575 are separated by 5 nucleotides
OH686_22555: OH686_22555 - hypothetical protein, at 4,580,330 to 4,581,097
_22555
OH686_22560: OH686_22560 - hypothetical protein, at 4,581,193 to 4,581,594
_22560
OH686_22565: OH686_22565 - Protease HtpX, at 4,581,719 to 4,582,594
_22565
OH686_22570: OH686_22570 - hypothetical protein, at 4,582,683 to 4,583,135
_22570
OH686_22575: OH686_22575 - Alanine transaminase , at 4,583,141 to 4,584,352
_22575
Position (kb) 4581
4582
4583 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4580.742 kb on + strand, within OH686_22555 at 4580.742 kb on + strand, within OH686_22555 at 4580.743 kb on - strand, within OH686_22555 at 4580.743 kb on - strand, within OH686_22555 at 4580.872 kb on - strand, within OH686_22555 at 4580.884 kb on - strand, within OH686_22555 at 4580.884 kb on - strand, within OH686_22555 at 4580.920 kb on + strand, within OH686_22555 at 4580.921 kb on - strand, within OH686_22555 at 4580.921 kb on - strand, within OH686_22555 at 4580.921 kb on - strand, within OH686_22555 at 4580.921 kb on - strand, within OH686_22555 at 4581.156 kb on + strand at 4581.156 kb on + strand at 4581.157 kb on - strand at 4581.425 kb on + strand, within OH686_22560 at 4581.584 kb on + strand at 4581.584 kb on + strand at 4581.584 kb on + strand at 4581.584 kb on + strand at 4581.584 kb on + strand at 4581.584 kb on + strand at 4581.584 kb on + strand at 4581.584 kb on + strand at 4581.585 kb on - strand at 4581.585 kb on - strand at 4581.585 kb on - strand at 4581.621 kb on + strand at 4581.621 kb on + strand at 4581.621 kb on + strand at 4581.622 kb on - strand at 4581.689 kb on + strand at 4581.689 kb on + strand at 4581.689 kb on + strand at 4581.689 kb on + strand at 4581.690 kb on - strand at 4581.721 kb on - strand at 4581.721 kb on - strand at 4581.797 kb on + strand at 4581.797 kb on + strand at 4581.797 kb on + strand at 4581.798 kb on - strand at 4582.013 kb on + strand, within OH686_22565 at 4582.013 kb on + strand, within OH686_22565 at 4582.013 kb on + strand, within OH686_22565 at 4582.013 kb on + strand, within OH686_22565 at 4582.013 kb on + strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.014 kb on - strand, within OH686_22565 at 4582.017 kb on + strand, within OH686_22565 at 4582.017 kb on + strand, within OH686_22565 at 4582.017 kb on + strand, within OH686_22565 at 4582.017 kb on + strand, within OH686_22565 at 4582.018 kb on - strand, within OH686_22565 at 4582.018 kb on - strand, within OH686_22565 at 4582.281 kb on + strand, within OH686_22565 at 4582.281 kb on + strand, within OH686_22565 at 4582.282 kb on - strand, within OH686_22565 at 4582.282 kb on - strand, within OH686_22565 at 4582.491 kb on + strand, within OH686_22565 at 4582.491 kb on + strand, within OH686_22565 at 4582.491 kb on + strand, within OH686_22565 at 4582.491 kb on + strand, within OH686_22565 at 4582.491 kb on + strand, within OH686_22565 at 4582.491 kb on + strand, within OH686_22565 at 4582.492 kb on - strand, within OH686_22565 at 4582.492 kb on - strand, within OH686_22565 at 4582.492 kb on - strand, within OH686_22565 at 4582.492 kb on - strand, within OH686_22565 at 4582.492 kb on - strand, within OH686_22565 at 4582.585 kb on + strand at 4582.585 kb on + strand at 4582.586 kb on - strand at 4582.586 kb on - strand at 4582.597 kb on + strand at 4582.597 kb on + strand at 4582.597 kb on + strand at 4582.597 kb on + strand at 4582.597 kb on + strand at 4582.598 kb on - strand at 4582.628 kb on + strand at 4582.628 kb on + strand at 4582.628 kb on + strand at 4582.628 kb on + strand at 4582.628 kb on + strand at 4582.628 kb on + strand at 4582.628 kb on + strand at 4582.628 kb on + strand at 4582.629 kb on - strand at 4582.629 kb on - strand at 4582.629 kb on - strand at 4582.629 kb on - strand at 4582.629 kb on - strand at 4582.629 kb on - strand at 4582.629 kb on - strand at 4582.629 kb on - strand at 4582.629 kb on - strand at 4582.633 kb on - strand at 4582.633 kb on - strand at 4582.641 kb on + strand at 4582.641 kb on + strand at 4582.642 kb on - strand at 4582.642 kb on - strand at 4582.642 kb on - strand at 4582.642 kb on - strand at 4582.642 kb on - strand at 4582.642 kb on - strand at 4582.642 kb on - strand at 4582.643 kb on + strand at 4582.643 kb on + strand at 4582.643 kb on + strand at 4582.643 kb on + strand at 4582.643 kb on + strand at 4582.644 kb on - strand at 4582.644 kb on - strand at 4582.644 kb on - strand at 4582.644 kb on - strand at 4582.644 kb on - strand at 4582.644 kb on - strand at 4582.645 kb on + strand at 4582.645 kb on + strand at 4582.645 kb on + strand at 4582.646 kb on - strand at 4582.646 kb on - strand at 4582.646 kb on - strand at 4582.679 kb on + strand at 4582.689 kb on + strand at 4582.690 kb on - strand at 4582.690 kb on - strand at 4582.690 kb on - strand at 4582.915 kb on + strand, within OH686_22570 at 4582.915 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.942 kb on + strand, within OH686_22570 at 4582.943 kb on - strand, within OH686_22570 at 4582.943 kb on - strand, within OH686_22570 at 4582.943 kb on - strand, within OH686_22570 at 4582.943 kb on - strand, within OH686_22570 at 4582.943 kb on - strand, within OH686_22570 at 4582.943 kb on - strand, within OH686_22570 at 4582.943 kb on - strand, within OH686_22570 at 4582.943 kb on - strand, within OH686_22570 at 4583.047 kb on + strand, within OH686_22570 at 4583.047 kb on + strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.048 kb on - strand, within OH686_22570 at 4583.110 kb on + strand at 4583.110 kb on + strand at 4583.110 kb on + strand at 4583.111 kb on - strand at 4583.142 kb on + strand at 4583.142 kb on + strand at 4583.142 kb on + strand at 4583.142 kb on + strand at 4583.143 kb on - strand at 4583.143 kb on - strand at 4583.143 kb on - strand at 4583.358 kb on + strand, within OH686_22575 at 4583.358 kb on + strand, within OH686_22575 at 4583.358 kb on + strand, within OH686_22575 at 4583.358 kb on + strand, within OH686_22575 at 4583.358 kb on + strand, within OH686_22575 at 4583.359 kb on - strand, within OH686_22575 at 4583.359 kb on - strand, within OH686_22575 at 4583.359 kb on - strand, within OH686_22575 at 4583.359 kb on - strand, within OH686_22575 at 4583.359 kb on - strand, within OH686_22575 at 4583.388 kb on - strand, within OH686_22575 at 4583.565 kb on + strand, within OH686_22575 at 4583.565 kb on + strand, within OH686_22575 at 4583.566 kb on - strand, within OH686_22575 at 4583.566 kb on - strand, within OH686_22575 at 4583.566 kb on - strand, within OH686_22575 at 4583.566 kb on - strand, within OH686_22575 at 4583.566 kb on - strand, within OH686_22575
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 4,580,742 + OH686_22555 0.54 -0.3 4,580,742 + OH686_22555 0.54 +0.1 4,580,743 - OH686_22555 0.54 -2.9 4,580,743 - OH686_22555 0.54 +0.3 4,580,872 - OH686_22555 0.71 +1.5 4,580,884 - OH686_22555 0.72 +0.7 4,580,884 - OH686_22555 0.72 +0.6 4,580,920 + OH686_22555 0.77 -1.8 4,580,921 - OH686_22555 0.77 +1.1 4,580,921 - OH686_22555 0.77 +1.1 4,580,921 - OH686_22555 0.77 -0.7 4,580,921 - OH686_22555 0.77 -0.4 4,581,156 + +0.5 4,581,156 + -2.8 4,581,157 - -2.6 4,581,425 + OH686_22560 0.58 -0.5 4,581,584 + -2.0 4,581,584 + +0.4 4,581,584 + -2.5 4,581,584 + -3.1 4,581,584 + -1.7 4,581,584 + +0.6 4,581,584 + -1.5 4,581,584 + -0.0 4,581,585 - +1.1 4,581,585 - +0.8 4,581,585 - +1.0 4,581,621 + -1.2 4,581,621 + -2.4 4,581,621 + -2.1 4,581,622 - +0.2 4,581,689 + +0.1 4,581,689 + +0.2 4,581,689 + -2.0 4,581,689 + +1.1 4,581,690 - -0.7 4,581,721 - -2.8 4,581,721 - +2.4 4,581,797 + -1.4 4,581,797 + -2.0 4,581,797 + -0.6 4,581,798 - -0.4 4,582,013 + OH686_22565 0.34 -3.4 4,582,013 + OH686_22565 0.34 -3.1 4,582,013 + OH686_22565 0.34 -2.2 4,582,013 + OH686_22565 0.34 -2.6 4,582,013 + OH686_22565 0.34 -2.6 4,582,014 - OH686_22565 0.34 -3.0 4,582,014 - OH686_22565 0.34 -1.5 4,582,014 - OH686_22565 0.34 -0.8 4,582,014 - OH686_22565 0.34 -1.8 4,582,014 - OH686_22565 0.34 -2.2 4,582,014 - OH686_22565 0.34 -1.5 4,582,014 - OH686_22565 0.34 -1.0 4,582,014 - OH686_22565 0.34 -2.5 4,582,014 - OH686_22565 0.34 -2.1 4,582,014 - OH686_22565 0.34 -1.5 4,582,014 - OH686_22565 0.34 -2.2 4,582,014 - OH686_22565 0.34 -0.1 4,582,014 - OH686_22565 0.34 -3.1 4,582,017 + OH686_22565 0.34 -0.6 4,582,017 + OH686_22565 0.34 -2.6 4,582,017 + OH686_22565 0.34 -0.6 4,582,017 + OH686_22565 0.34 -2.8 4,582,018 - OH686_22565 0.34 -3.1 4,582,018 - OH686_22565 0.34 -1.5 4,582,281 + OH686_22565 0.64 -3.2 4,582,281 + OH686_22565 0.64 -1.9 4,582,282 - OH686_22565 0.64 -2.6 4,582,282 - OH686_22565 0.64 -0.8 4,582,491 + OH686_22565 0.88 -3.0 4,582,491 + OH686_22565 0.88 -0.1 4,582,491 + OH686_22565 0.88 -2.1 4,582,491 + OH686_22565 0.88 -1.0 4,582,491 + OH686_22565 0.88 -2.6 4,582,491 + OH686_22565 0.88 -1.4 4,582,492 - OH686_22565 0.88 +0.4 4,582,492 - OH686_22565 0.88 -1.4 4,582,492 - OH686_22565 0.88 -2.8 4,582,492 - OH686_22565 0.88 -2.2 4,582,492 - OH686_22565 0.88 +0.2 4,582,585 + +0.2 4,582,585 + -0.1 4,582,586 - -2.2 4,582,586 - -2.0 4,582,597 + -0.8 4,582,597 + -0.6 4,582,597 + -1.0 4,582,597 + -1.8 4,582,597 + -2.0 4,582,598 - -2.6 4,582,628 + -2.3 4,582,628 + +1.2 4,582,628 + -3.4 4,582,628 + +0.1 4,582,628 + -3.5 4,582,628 + -2.3 4,582,628 + -2.0 4,582,628 + -0.6 4,582,629 - -0.9 4,582,629 - -2.1 4,582,629 - -2.0 4,582,629 - -3.1 4,582,629 - +1.2 4,582,629 - +1.1 4,582,629 - +0.5 4,582,629 - +0.2 4,582,629 - +0.8 4,582,633 - -0.1 4,582,633 - +0.2 4,582,641 + -0.8 4,582,641 + -2.7 4,582,642 - -0.1 4,582,642 - -0.1 4,582,642 - +0.3 4,582,642 - +2.0 4,582,642 - -0.8 4,582,642 - +1.4 4,582,642 - +0.3 4,582,643 + -1.8 4,582,643 + -2.0 4,582,643 + -0.1 4,582,643 + +3.4 4,582,643 + -0.1 4,582,644 - -0.1 4,582,644 - -0.2 4,582,644 - -0.0 4,582,644 - +1.0 4,582,644 - +1.0 4,582,644 - +1.2 4,582,645 + -2.1 4,582,645 + -1.6 4,582,645 + -1.4 4,582,646 - -0.0 4,582,646 - +0.6 4,582,646 - +0.4 4,582,679 + -1.9 4,582,689 + -2.0 4,582,690 - -1.0 4,582,690 - -2.9 4,582,690 - -1.2 4,582,915 + OH686_22570 0.51 +0.5 4,582,915 + OH686_22570 0.51 +1.0 4,582,942 + OH686_22570 0.57 -1.2 4,582,942 + OH686_22570 0.57 +0.9 4,582,942 + OH686_22570 0.57 -1.0 4,582,942 + OH686_22570 0.57 +0.9 4,582,942 + OH686_22570 0.57 -2.0 4,582,942 + OH686_22570 0.57 +0.2 4,582,942 + OH686_22570 0.57 +0.9 4,582,942 + OH686_22570 0.57 -0.1 4,582,942 + OH686_22570 0.57 +3.2 4,582,942 + OH686_22570 0.57 +0.2 4,582,942 + OH686_22570 0.57 -1.0 4,582,942 + OH686_22570 0.57 +0.5 4,582,942 + OH686_22570 0.57 -1.5 4,582,942 + OH686_22570 0.57 -0.6 4,582,942 + OH686_22570 0.57 -0.4 4,582,942 + OH686_22570 0.57 -1.6 4,582,942 + OH686_22570 0.57 +0.6 4,582,943 - OH686_22570 0.57 +1.2 4,582,943 - OH686_22570 0.57 -3.4 4,582,943 - OH686_22570 0.57 -0.0 4,582,943 - OH686_22570 0.57 -0.1 4,582,943 - OH686_22570 0.57 -0.5 4,582,943 - OH686_22570 0.57 -1.5 4,582,943 - OH686_22570 0.57 +0.6 4,582,943 - OH686_22570 0.57 +1.1 4,583,047 + OH686_22570 0.80 +0.2 4,583,047 + OH686_22570 0.80 +0.1 4,583,048 - OH686_22570 0.81 +0.1 4,583,048 - OH686_22570 0.81 -1.1 4,583,048 - OH686_22570 0.81 -1.0 4,583,048 - OH686_22570 0.81 -1.0 4,583,048 - OH686_22570 0.81 -2.5 4,583,048 - OH686_22570 0.81 -1.5 4,583,048 - OH686_22570 0.81 -2.3 4,583,048 - OH686_22570 0.81 -1.6 4,583,048 - OH686_22570 0.81 -1.1 4,583,048 - OH686_22570 0.81 +0.6 4,583,048 - OH686_22570 0.81 +0.2 4,583,048 - OH686_22570 0.81 +0.4 4,583,048 - OH686_22570 0.81 -2.9 4,583,110 + +2.4 4,583,110 + -0.7 4,583,110 + +0.2 4,583,111 - -3.1 4,583,142 + -1.8 4,583,142 + -0.8 4,583,142 + -0.1 4,583,142 + +0.8 4,583,143 - +1.5 4,583,143 - -0.6 4,583,143 - +2.2 4,583,358 + OH686_22575 0.18 -1.0 4,583,358 + OH686_22575 0.18 -1.7 4,583,358 + OH686_22575 0.18 +1.1 4,583,358 + OH686_22575 0.18 +0.5 4,583,358 + OH686_22575 0.18 +1.0 4,583,359 - OH686_22575 0.18 -0.4 4,583,359 - OH686_22575 0.18 +1.2 4,583,359 - OH686_22575 0.18 -1.1 4,583,359 - OH686_22575 0.18 +0.1 4,583,359 - OH686_22575 0.18 +1.1 4,583,388 - OH686_22575 0.20 -1.7 4,583,565 + OH686_22575 0.35 -0.9 4,583,565 + OH686_22575 0.35 +0.2 4,583,566 - OH686_22575 0.35 +1.9 4,583,566 - OH686_22575 0.35 -3.2 4,583,566 - OH686_22575 0.35 -1.2 4,583,566 - OH686_22575 0.35 +0.3 4,583,566 - OH686_22575 0.35 +0.0
Or see this region's nucleotide sequence