Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_20865 and OH686_20870 overlap by 1 nucleotides OH686_20870 and OH686_20875 are separated by 26 nucleotides
OH686_20865: OH686_20865 - phosphoserine transaminase, at 4,265,424 to 4,266,509
_20865
OH686_20870: OH686_20870 - Chorismate mutase I / Prephenate dehydratase , at 4,266,509 to 4,267,606
_20870
OH686_20875: OH686_20875 - histidinol-phosphate transaminase, at 4,267,633 to 4,268,742
_20875
Position (kb)
4266
4267
4268 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4266.803 kb on + strand, within OH686_20870 at 4267.091 kb on + strand, within OH686_20870 at 4267.091 kb on + strand, within OH686_20870 at 4267.092 kb on - strand, within OH686_20870 at 4267.198 kb on + strand, within OH686_20870 at 4267.481 kb on + strand, within OH686_20870 at 4267.481 kb on + strand, within OH686_20870 at 4267.481 kb on + strand, within OH686_20870 at 4267.481 kb on + strand, within OH686_20870 at 4267.481 kb on + strand, within OH686_20870 at 4267.481 kb on + strand, within OH686_20870 at 4267.481 kb on + strand, within OH686_20870 at 4267.481 kb on + strand, within OH686_20870 at 4267.481 kb on + strand, within OH686_20870 at 4267.481 kb on + strand, within OH686_20870 at 4267.482 kb on - strand, within OH686_20870 at 4267.482 kb on - strand, within OH686_20870 at 4267.482 kb on - strand, within OH686_20870 at 4267.482 kb on - strand, within OH686_20870 at 4267.482 kb on - strand, within OH686_20870 at 4267.687 kb on + strand at 4267.687 kb on + strand at 4267.687 kb on + strand at 4267.687 kb on + strand at 4267.687 kb on + strand at 4267.932 kb on + strand, within OH686_20875 at 4267.993 kb on + strand, within OH686_20875 at 4267.993 kb on + strand, within OH686_20875 at 4268.230 kb on + strand, within OH686_20875 at 4268.230 kb on + strand, within OH686_20875 at 4268.230 kb on + strand, within OH686_20875 at 4268.230 kb on + strand, within OH686_20875 at 4268.275 kb on + strand, within OH686_20875 at 4268.326 kb on + strand, within OH686_20875 at 4268.326 kb on + strand, within OH686_20875 at 4268.326 kb on + strand, within OH686_20875 at 4268.353 kb on + strand, within OH686_20875 at 4268.464 kb on + strand, within OH686_20875 at 4268.465 kb on - strand, within OH686_20875
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 4,266,803 + OH686_20870 0.27 -2.9 4,267,091 + OH686_20870 0.53 -0.4 4,267,091 + OH686_20870 0.53 -0.9 4,267,092 - OH686_20870 0.53 -0.1 4,267,198 + OH686_20870 0.63 +0.2 4,267,481 + OH686_20870 0.89 -0.1 4,267,481 + OH686_20870 0.89 +0.2 4,267,481 + OH686_20870 0.89 -1.7 4,267,481 + OH686_20870 0.89 -2.5 4,267,481 + OH686_20870 0.89 -1.7 4,267,481 + OH686_20870 0.89 -2.0 4,267,481 + OH686_20870 0.89 -1.1 4,267,481 + OH686_20870 0.89 -1.2 4,267,481 + OH686_20870 0.89 -2.2 4,267,481 + OH686_20870 0.89 -0.8 4,267,482 - OH686_20870 0.89 -0.4 4,267,482 - OH686_20870 0.89 -0.1 4,267,482 - OH686_20870 0.89 -1.4 4,267,482 - OH686_20870 0.89 -0.1 4,267,482 - OH686_20870 0.89 -0.1 4,267,687 + +0.2 4,267,687 + -1.4 4,267,687 + -1.8 4,267,687 + -0.1 4,267,687 + -0.1 4,267,932 + OH686_20875 0.27 -0.1 4,267,993 + OH686_20875 0.32 -0.1 4,267,993 + OH686_20875 0.32 +0.3 4,268,230 + OH686_20875 0.54 +0.2 4,268,230 + OH686_20875 0.54 -2.0 4,268,230 + OH686_20875 0.54 -0.5 4,268,230 + OH686_20875 0.54 -0.9 4,268,275 + OH686_20875 0.58 +0.3 4,268,326 + OH686_20875 0.62 -2.5 4,268,326 + OH686_20875 0.62 +0.5 4,268,326 + OH686_20875 0.62 -1.1 4,268,353 + OH686_20875 0.65 -3.0 4,268,464 + OH686_20875 0.75 +0.9 4,268,465 - OH686_20875 0.75 -0.6
Or see this region's nucleotide sequence