Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_15525 and OH686_15530 are separated by 39 nucleotides OH686_15530 and OH686_15535 are separated by 301 nucleotides OH686_15535 and OH686_15540 are separated by 179 nucleotides OH686_15540 and OH686_15545 overlap by 150 nucleotides OH686_15545 and OH686_15550 overlap by 108 nucleotides OH686_15550 and OH686_15555 are separated by 201 nucleotides
OH686_15525: OH686_15525 - Two-component system sensor histidine kinase/response regulator hybrid, at 3,243,623 to 3,244,759
_15525
OH686_15530: OH686_15530 - CDS, at 3,244,799 to 3,244,918
_15530
OH686_15535: OH686_15535 - hypothetical protein, at 3,245,220 to 3,245,585
_15535
OH686_15540: OH686_15540 - CDS, at 3,245,765 to 3,245,938
_15540
OH686_15545: OH686_15545 - hypothetical protein' product='hypothetical protein, at 3,245,789 to 3,246,058
_15545
OH686_15550: OH686_15550 - CDS, at 3,245,951 to 3,246,109
_15550
OH686_15555: OH686_15555 - Monooxygenase, flavin-binding family, at 3,246,311 to 3,247,822
_15555
Position (kb) 3245
3246 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 3244.608 kb on + strand, within OH686_15525 at 3244.609 kb on - strand, within OH686_15525 at 3244.609 kb on - strand, within OH686_15525 at 3244.609 kb on - strand, within OH686_15525 at 3244.609 kb on - strand, within OH686_15525 at 3244.609 kb on - strand, within OH686_15525 at 3244.646 kb on + strand at 3244.671 kb on + strand at 3244.671 kb on + strand at 3244.671 kb on + strand at 3244.671 kb on + strand at 3244.671 kb on + strand at 3244.671 kb on + strand at 3244.671 kb on + strand at 3244.671 kb on + strand at 3244.671 kb on + strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.672 kb on - strand at 3244.680 kb on + strand at 3244.680 kb on + strand at 3244.681 kb on - strand at 3244.710 kb on + strand at 3244.710 kb on + strand at 3244.710 kb on + strand at 3244.711 kb on - strand at 3244.711 kb on - strand at 3244.711 kb on - strand at 3244.711 kb on - strand at 3244.711 kb on - strand at 3244.798 kb on + strand at 3244.798 kb on + strand at 3244.799 kb on - strand at 3244.799 kb on - strand at 3244.799 kb on - strand at 3244.807 kb on + strand at 3244.807 kb on + strand at 3244.807 kb on + strand at 3244.807 kb on + strand at 3244.807 kb on + strand at 3244.807 kb on + strand at 3244.807 kb on + strand at 3244.807 kb on + strand at 3244.807 kb on + strand at 3244.807 kb on + strand at 3244.807 kb on + strand at 3244.808 kb on - strand at 3244.808 kb on - strand at 3244.808 kb on - strand at 3244.808 kb on - strand at 3244.808 kb on - strand at 3244.808 kb on - strand at 3244.859 kb on + strand, within OH686_15530 at 3244.916 kb on + strand at 3244.916 kb on + strand at 3244.916 kb on + strand at 3244.916 kb on + strand at 3244.916 kb on + strand at 3244.916 kb on + strand at 3244.916 kb on + strand at 3244.917 kb on - strand at 3244.917 kb on - strand at 3244.917 kb on - strand at 3244.917 kb on - strand at 3244.917 kb on - strand at 3244.917 kb on - strand at 3244.917 kb on - strand at 3244.917 kb on - strand at 3244.917 kb on - strand at 3245.109 kb on + strand at 3245.109 kb on + strand at 3245.110 kb on - strand at 3245.206 kb on + strand at 3245.214 kb on - strand at 3245.214 kb on - strand at 3245.214 kb on - strand at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.380 kb on + strand, within OH686_15535 at 3245.381 kb on - strand, within OH686_15535 at 3245.381 kb on - strand, within OH686_15535 at 3245.381 kb on - strand, within OH686_15535 at 3245.381 kb on - strand, within OH686_15535 at 3245.381 kb on - strand, within OH686_15535 at 3245.381 kb on - strand, within OH686_15535 at 3245.381 kb on - strand, within OH686_15535 at 3245.381 kb on - strand, within OH686_15535 at 3245.381 kb on - strand, within OH686_15535 at 3245.381 kb on - strand, within OH686_15535 at 3245.414 kb on + strand, within OH686_15535 at 3245.415 kb on - strand, within OH686_15535 at 3245.480 kb on + strand, within OH686_15535 at 3245.480 kb on + strand, within OH686_15535 at 3245.481 kb on - strand, within OH686_15535 at 3245.481 kb on - strand, within OH686_15535 at 3245.481 kb on - strand, within OH686_15535 at 3245.583 kb on + strand at 3245.583 kb on + strand at 3245.583 kb on + strand at 3245.583 kb on + strand at 3245.583 kb on + strand at 3245.584 kb on - strand at 3245.584 kb on - strand at 3245.584 kb on - strand at 3245.584 kb on - strand at 3245.584 kb on - strand at 3245.584 kb on - strand at 3245.626 kb on - strand at 3245.626 kb on - strand at 3245.730 kb on + strand at 3245.730 kb on + strand at 3245.730 kb on + strand at 3245.730 kb on + strand at 3245.730 kb on + strand at 3245.731 kb on - strand at 3245.731 kb on - strand at 3245.731 kb on - strand at 3245.731 kb on - strand at 3245.731 kb on - strand at 3245.731 kb on - strand at 3245.839 kb on + strand at 3245.926 kb on + strand at 3246.070 kb on + strand, within OH686_15550 at 3246.070 kb on + strand, within OH686_15550 at 3246.070 kb on + strand, within OH686_15550 at 3246.070 kb on + strand, within OH686_15550 at 3246.070 kb on + strand, within OH686_15550 at 3246.070 kb on + strand, within OH686_15550 at 3246.071 kb on - strand, within OH686_15550 at 3246.071 kb on - strand, within OH686_15550 at 3246.071 kb on - strand, within OH686_15550 at 3246.071 kb on - strand, within OH686_15550 at 3246.142 kb on + strand at 3246.142 kb on + strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.143 kb on - strand at 3246.257 kb on + strand at 3246.257 kb on + strand at 3246.257 kb on + strand at 3246.257 kb on + strand at 3246.257 kb on + strand at 3246.257 kb on + strand at 3246.257 kb on + strand at 3246.258 kb on - strand at 3246.258 kb on - strand at 3246.258 kb on - strand at 3246.258 kb on - strand at 3246.258 kb on - strand at 3246.258 kb on - strand at 3246.258 kb on - strand at 3246.371 kb on + strand at 3246.371 kb on + strand at 3246.371 kb on + strand at 3246.371 kb on + strand at 3246.371 kb on + strand at 3246.371 kb on + strand at 3246.371 kb on + strand at 3246.371 kb on + strand at 3246.371 kb on + strand at 3246.371 kb on + strand at 3246.372 kb on - strand at 3246.372 kb on - strand at 3246.372 kb on - strand at 3246.372 kb on - strand at 3246.372 kb on - strand at 3246.450 kb on + strand at 3246.450 kb on + strand at 3246.450 kb on + strand at 3246.450 kb on + strand at 3246.450 kb on + strand at 3246.450 kb on + strand at 3246.450 kb on + strand at 3246.450 kb on + strand at 3246.451 kb on - strand at 3246.451 kb on - strand at 3246.451 kb on - strand at 3246.451 kb on - strand at 3246.451 kb on - strand at 3246.451 kb on - strand at 3246.454 kb on - strand at 3246.454 kb on - strand at 3246.454 kb on - strand at 3246.454 kb on - strand at 3246.521 kb on + strand, within OH686_15555 at 3246.521 kb on + strand, within OH686_15555 at 3246.521 kb on + strand, within OH686_15555 at 3246.521 kb on + strand, within OH686_15555 at 3246.521 kb on + strand, within OH686_15555 at 3246.521 kb on + strand, within OH686_15555 at 3246.522 kb on - strand, within OH686_15555 at 3246.522 kb on - strand, within OH686_15555 at 3246.531 kb on + strand, within OH686_15555 at 3246.531 kb on + strand, within OH686_15555 at 3246.531 kb on + strand, within OH686_15555 at 3246.532 kb on - strand, within OH686_15555 at 3246.532 kb on - strand, within OH686_15555 at 3246.532 kb on - strand, within OH686_15555 at 3246.554 kb on + strand, within OH686_15555 at 3246.554 kb on + strand, within OH686_15555 at 3246.554 kb on + strand, within OH686_15555 at 3246.554 kb on + strand, within OH686_15555 at 3246.554 kb on + strand, within OH686_15555 at 3246.554 kb on + strand, within OH686_15555 at 3246.554 kb on + strand, within OH686_15555 at 3246.555 kb on - strand, within OH686_15555 at 3246.555 kb on - strand, within OH686_15555 at 3246.555 kb on - strand, within OH686_15555 at 3246.555 kb on - strand, within OH686_15555 at 3246.555 kb on - strand, within OH686_15555
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 3,244,608 + OH686_15525 0.87 +1.6 3,244,609 - OH686_15525 0.87 +0.9 3,244,609 - OH686_15525 0.87 +0.6 3,244,609 - OH686_15525 0.87 -1.4 3,244,609 - OH686_15525 0.87 -2.0 3,244,609 - OH686_15525 0.87 -0.7 3,244,646 + -2.4 3,244,671 + +0.9 3,244,671 + +0.8 3,244,671 + -1.1 3,244,671 + +0.9 3,244,671 + -1.3 3,244,671 + -0.6 3,244,671 + +2.3 3,244,671 + +1.1 3,244,671 + +0.1 3,244,672 - -0.1 3,244,672 - +2.0 3,244,672 - +0.5 3,244,672 - +1.0 3,244,672 - -2.7 3,244,672 - +0.9 3,244,672 - -0.5 3,244,672 - -3.7 3,244,672 - -0.4 3,244,672 - -0.9 3,244,672 - +0.1 3,244,672 - -2.2 3,244,672 - -1.9 3,244,680 + -1.0 3,244,680 + -0.0 3,244,681 - +0.1 3,244,710 + +0.5 3,244,710 + +0.5 3,244,710 + -1.9 3,244,711 - +0.9 3,244,711 - -1.5 3,244,711 - -2.3 3,244,711 - +3.1 3,244,711 - -1.0 3,244,798 + -1.8 3,244,798 + +1.2 3,244,799 - +0.9 3,244,799 - +1.1 3,244,799 - +0.8 3,244,807 + +0.7 3,244,807 + -0.6 3,244,807 + -0.1 3,244,807 + -2.0 3,244,807 + -3.5 3,244,807 + +1.8 3,244,807 + -2.4 3,244,807 + +0.5 3,244,807 + +0.1 3,244,807 + +0.6 3,244,807 + -2.9 3,244,808 - +0.7 3,244,808 - -2.6 3,244,808 - +0.2 3,244,808 - +0.5 3,244,808 - -0.2 3,244,808 - +0.0 3,244,859 + OH686_15530 0.50 -0.6 3,244,916 + -0.9 3,244,916 + -0.4 3,244,916 + -2.2 3,244,916 + +0.6 3,244,916 + +1.3 3,244,916 + -0.2 3,244,916 + +0.4 3,244,917 - +1.0 3,244,917 - -2.6 3,244,917 - -3.2 3,244,917 - -0.5 3,244,917 - -2.3 3,244,917 - +0.7 3,244,917 - -0.3 3,244,917 - -0.8 3,244,917 - -0.1 3,245,109 + -1.0 3,245,109 + -1.6 3,245,110 - -1.4 3,245,206 + +0.8 3,245,214 - +0.7 3,245,214 - -0.4 3,245,214 - -3.1 3,245,380 + OH686_15535 0.44 +0.4 3,245,380 + OH686_15535 0.44 +0.9 3,245,380 + OH686_15535 0.44 -3.6 3,245,380 + OH686_15535 0.44 -2.0 3,245,380 + OH686_15535 0.44 -0.1 3,245,380 + OH686_15535 0.44 -0.2 3,245,380 + OH686_15535 0.44 +0.6 3,245,380 + OH686_15535 0.44 +0.8 3,245,380 + OH686_15535 0.44 +1.7 3,245,380 + OH686_15535 0.44 +0.1 3,245,380 + OH686_15535 0.44 -3.7 3,245,380 + OH686_15535 0.44 -1.7 3,245,380 + OH686_15535 0.44 -0.7 3,245,380 + OH686_15535 0.44 -1.4 3,245,380 + OH686_15535 0.44 -3.2 3,245,380 + OH686_15535 0.44 -0.2 3,245,381 - OH686_15535 0.44 -0.6 3,245,381 - OH686_15535 0.44 +0.5 3,245,381 - OH686_15535 0.44 +0.2 3,245,381 - OH686_15535 0.44 -0.2 3,245,381 - OH686_15535 0.44 -0.9 3,245,381 - OH686_15535 0.44 +0.6 3,245,381 - OH686_15535 0.44 -2.3 3,245,381 - OH686_15535 0.44 +0.3 3,245,381 - OH686_15535 0.44 -1.5 3,245,381 - OH686_15535 0.44 -0.2 3,245,414 + OH686_15535 0.53 -1.3 3,245,415 - OH686_15535 0.53 +0.6 3,245,480 + OH686_15535 0.71 -1.1 3,245,480 + OH686_15535 0.71 +0.2 3,245,481 - OH686_15535 0.71 -0.4 3,245,481 - OH686_15535 0.71 -3.4 3,245,481 - OH686_15535 0.71 +0.3 3,245,583 + -1.1 3,245,583 + +0.6 3,245,583 + -1.7 3,245,583 + +0.7 3,245,583 + -2.1 3,245,584 - +1.1 3,245,584 - -2.0 3,245,584 - +1.5 3,245,584 - +0.6 3,245,584 - -1.9 3,245,584 - +0.3 3,245,626 - -0.4 3,245,626 - +0.2 3,245,730 + +0.4 3,245,730 + +2.0 3,245,730 + -2.6 3,245,730 + -0.9 3,245,730 + +0.2 3,245,731 - +0.9 3,245,731 - +0.6 3,245,731 - +0.3 3,245,731 - +0.2 3,245,731 - +1.9 3,245,731 - +1.1 3,245,839 + -2.4 3,245,926 + -1.9 3,246,070 + OH686_15550 0.75 -0.6 3,246,070 + OH686_15550 0.75 -1.3 3,246,070 + OH686_15550 0.75 +0.7 3,246,070 + OH686_15550 0.75 +0.5 3,246,070 + OH686_15550 0.75 -1.1 3,246,070 + OH686_15550 0.75 +1.8 3,246,071 - OH686_15550 0.75 -0.4 3,246,071 - OH686_15550 0.75 +3.1 3,246,071 - OH686_15550 0.75 -0.9 3,246,071 - OH686_15550 0.75 +0.7 3,246,142 + -3.9 3,246,142 + -1.9 3,246,143 - +0.6 3,246,143 - +0.0 3,246,143 - +0.3 3,246,143 - +1.9 3,246,143 - +0.0 3,246,143 - -3.3 3,246,257 + -1.7 3,246,257 + +0.6 3,246,257 + -2.6 3,246,257 + -2.4 3,246,257 + +2.6 3,246,257 + +1.0 3,246,257 + +2.1 3,246,258 - -0.2 3,246,258 - +0.7 3,246,258 - -0.8 3,246,258 - +0.6 3,246,258 - +3.0 3,246,258 - +4.4 3,246,258 - +0.3 3,246,371 + +1.0 3,246,371 + -1.4 3,246,371 + +1.1 3,246,371 + -0.0 3,246,371 + +0.5 3,246,371 + -0.7 3,246,371 + +0.6 3,246,371 + -2.0 3,246,371 + -2.1 3,246,371 + +1.2 3,246,372 - -2.3 3,246,372 - -2.7 3,246,372 - +0.3 3,246,372 - -0.7 3,246,372 - +2.4 3,246,450 + +1.0 3,246,450 + -3.1 3,246,450 + +0.8 3,246,450 + -1.5 3,246,450 + +0.5 3,246,450 + +0.5 3,246,450 + +0.4 3,246,450 + -2.8 3,246,451 - +0.1 3,246,451 - -0.3 3,246,451 - +0.2 3,246,451 - +1.4 3,246,451 - +1.2 3,246,451 - -2.5 3,246,454 - +0.2 3,246,454 - +1.7 3,246,454 - -2.2 3,246,454 - +0.4 3,246,521 + OH686_15555 0.14 -2.4 3,246,521 + OH686_15555 0.14 -0.3 3,246,521 + OH686_15555 0.14 -1.3 3,246,521 + OH686_15555 0.14 -1.8 3,246,521 + OH686_15555 0.14 -1.0 3,246,521 + OH686_15555 0.14 +0.6 3,246,522 - OH686_15555 0.14 +0.2 3,246,522 - OH686_15555 0.14 +1.0 3,246,531 + OH686_15555 0.15 -3.4 3,246,531 + OH686_15555 0.15 +0.1 3,246,531 + OH686_15555 0.15 -0.0 3,246,532 - OH686_15555 0.15 +1.4 3,246,532 - OH686_15555 0.15 -0.2 3,246,532 - OH686_15555 0.15 +1.4 3,246,554 + OH686_15555 0.16 -2.7 3,246,554 + OH686_15555 0.16 -1.9 3,246,554 + OH686_15555 0.16 +0.4 3,246,554 + OH686_15555 0.16 -2.6 3,246,554 + OH686_15555 0.16 +2.9 3,246,554 + OH686_15555 0.16 +0.1 3,246,554 + OH686_15555 0.16 +1.5 3,246,555 - OH686_15555 0.16 +0.7 3,246,555 - OH686_15555 0.16 -0.9 3,246,555 - OH686_15555 0.16 -0.8 3,246,555 - OH686_15555 0.16 +1.7 3,246,555 - OH686_15555 0.16 -2.1
Or see this region's nucleotide sequence