Strain Fitness in Pseudomonas sp. S08-1 around OH686_09215

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,880,254	+		OH686_09205	0.32	-1.7
1,880,254	+		OH686_09205	0.32	-3.6
1,880,254	+		OH686_09205	0.32	-3.4
1,880,254	+		OH686_09205	0.32	-4.8
1,880,276	-		OH686_09205	0.35	-2.8
1,880,422	+		OH686_09205	0.60	-3.2
1,880,422	+		OH686_09205	0.60	-2.9
1,880,422	+		OH686_09205	0.60	-1.4
1,880,422	+		OH686_09205	0.60	-2.5
1,880,423	-		OH686_09205	0.60	-5.6
1,880,423	-		OH686_09205	0.60	-2.8
1,880,423	-		OH686_09205	0.60	-2.8
1,880,423	-		OH686_09205	0.60	-3.3
1,880,423	-		OH686_09205	0.60	-3.4
1,880,423	-		OH686_09205	0.60	-2.3
1,880,423	-		OH686_09205	0.60	-1.7
1,880,423	-		OH686_09205	0.60	-3.4
1,880,423	-		OH686_09205	0.60	-3.1
1,880,423	-		OH686_09205	0.60	-3.4
1,880,543	+		OH686_09205	0.80	-2.6
1,880,543	+		OH686_09205	0.80	+0.2
1,880,543	+		OH686_09205	0.80	-3.6
1,880,543	+		OH686_09205	0.80	-3.5
1,880,543	+		OH686_09205	0.80	-4.2
1,880,544	-		OH686_09205	0.80	-4.0
1,880,544	-		OH686_09205	0.80	-3.8
1,880,544	-		OH686_09205	0.80	-2.6
1,880,544	-		OH686_09205	0.80	-4.4
1,880,554	+		OH686_09205	0.82	-4.0
1,880,555	-		OH686_09205	0.82	-3.9
1,880,555	-		OH686_09205	0.82	-3.8
1,880,555	-		OH686_09205	0.82	-3.4
1,880,555	-		OH686_09205	0.82	-5.0
1,880,662	+				+0.8
1,880,662	+				-0.3
1,880,662	+				+1.3
1,880,662	+				-0.8
1,880,663	-				-3.1
1,880,663	-				-3.0
1,880,663	-				-1.8
1,880,676	+				-0.3
1,880,676	+				-2.6
1,880,676	+				-0.3
1,880,676	+				-0.2
1,880,676	+				+0.6
1,880,677	-				+2.3
1,880,677	-				-2.1
1,880,677	-				-4.5
1,880,919	+		OH686_09210	0.75	-2.6
1,880,919	+		OH686_09210	0.75	+0.3
1,880,919	+		OH686_09210	0.75	-4.0
1,880,919	+		OH686_09210	0.75	-0.5
1,880,919	+		OH686_09210	0.75	-4.3
1,880,919	+		OH686_09210	0.75	-2.0
1,880,919	+		OH686_09210	0.75	-3.3
1,880,920	-		OH686_09210	0.76	-2.0
1,880,920	-		OH686_09210	0.76	-1.4
1,880,920	-		OH686_09210	0.76	-0.1
1,880,920	-		OH686_09210	0.76	-3.7
1,880,934	+		OH686_09210	0.80	+0.1
1,880,934	+		OH686_09210	0.80	+1.3
1,880,934	+		OH686_09210	0.80	+1.1
1,880,934	+		OH686_09210	0.80	-2.7
1,880,934	+		OH686_09210	0.80	+1.4
1,880,934	+		OH686_09210	0.80	+0.3
1,880,934	+		OH686_09210	0.80	-1.5
1,880,934	+		OH686_09210	0.80	+1.1
1,880,934	+		OH686_09210	0.80	-0.6
1,880,934	+		OH686_09210	0.80	-2.4
1,880,934	+		OH686_09210	0.80	+1.1
1,880,934	+		OH686_09210	0.80	-3.4
1,880,934	+		OH686_09210	0.80	+1.2
1,880,934	+		OH686_09210	0.80	+0.4
1,880,935	-		OH686_09210	0.80	+0.8
1,880,935	-		OH686_09210	0.80	-2.2
1,880,935	-		OH686_09210	0.80	-0.4
1,880,935	-		OH686_09210	0.80	-1.7
1,880,943	+		OH686_09210	0.83	+0.8
1,880,943	+		OH686_09210	0.83	+1.2
1,880,943	+		OH686_09210	0.83	-2.4
1,880,944	-		OH686_09210	0.83	-1.4
1,880,944	-		OH686_09210	0.83	-2.5
1,880,944	-		OH686_09210	0.83	-1.9
1,880,944	-		OH686_09210	0.83	-0.8
1,880,976	+				+0.7
1,880,976	+				+1.4
1,880,976	+				-0.7
1,880,976	+				+1.1
1,880,976	+				-2.2
1,880,976	+				+0.3
1,880,976	+				+2.4
1,880,976	+				-2.2
1,880,976	+				+0.3
1,880,976	+				+1.8
1,880,976	+				-2.0
1,880,976	+				+0.1
1,880,976	+				+0.5
1,880,977	-				-3.1
1,880,977	-				+0.6
1,880,977	-				-2.8
1,880,977	-				-2.0
1,880,977	-				-2.9
1,880,977	-				-2.9
1,880,977	-				-2.5
1,880,977	-				-0.6
1,880,977	-				-2.4
1,880,977	-				+0.3
1,880,977	-				-1.9
1,880,977	-				-2.6
1,880,998	+				+0.2
1,880,998	+				+0.2
1,880,998	+				-1.2
1,880,998	+				+0.1
1,880,998	+				+1.7
1,880,998	+				-3.7
1,880,999	-				-4.2
1,880,999	-				-3.6
1,880,999	-				-1.9
1,880,999	-				-4.2
1,881,011	-				-0.9
1,881,011	-				-2.8
1,881,044	-				-0.9
1,881,067	+				-0.6
1,881,067	+				+1.6
1,881,068	-				-3.6
1,881,090	+				+1.1
1,881,090	+				+2.0
1,881,090	+				+0.7
1,881,090	+				+0.3
1,881,090	+				+1.4
1,881,090	+				-0.7
1,881,091	-				-2.0
1,881,091	-				-0.4
1,881,091	-				-3.0
1,881,091	-				-1.8
1,881,091	-				-2.9
1,881,091	-				-0.1
1,881,091	-				-2.0
1,881,092	+				+2.3
1,881,092	+				+1.5
1,881,092	+				+0.2
1,881,092	+				-2.6
1,881,093	-				-0.5
1,881,093	-				-1.0
1,881,093	-				-0.3
1,881,093	-				-0.4
1,881,093	-				-2.8
1,881,093	-				-0.5
1,881,093	-				-3.0
1,881,145	+				-1.0
1,881,145	+				-0.2
1,881,145	+				+1.2
1,881,145	+				-0.3
1,881,145	+				-0.4
1,881,145	+				+0.9
1,881,145	+				-0.1
1,881,146	-				-0.2
1,881,146	-				-0.5
1,881,146	-				+0.3
1,881,146	-				-2.3
1,881,146	-				+0.5
1,881,146	-				+0.7
1,881,146	-				-3.3
1,881,146	-				-0.4
1,881,147	+				+0.1
1,881,147	+				-0.8
1,881,147	+				+1.9
1,881,147	+				-2.0
1,881,147	+				-3.1
1,881,148	-				+0.3
1,881,148	-				-1.0
1,881,148	-				+0.6
1,881,148	-				-3.1
1,881,179	-				-2.0
1,881,179	-				-1.6
1,881,270	+		OH686_09215	0.11	-0.2
1,881,271	-		OH686_09215	0.11	+0.2
1,881,421	+		OH686_09215	0.22	-1.9
1,881,421	+		OH686_09215	0.22	-3.0
1,881,421	+		OH686_09215	0.22	-3.2
1,881,422	-		OH686_09215	0.22	-2.8
1,881,607	+		OH686_09215	0.36	-0.5
1,881,607	+		OH686_09215	0.36	-1.0
1,881,607	+		OH686_09215	0.36	-0.4
1,881,607	+		OH686_09215	0.36	+2.2
1,881,607	+		OH686_09215	0.36	-1.0
1,881,607	+		OH686_09215	0.36	+0.8
1,881,607	+		OH686_09215	0.36	-0.1
1,881,607	+		OH686_09215	0.36	-1.5
1,881,608	-		OH686_09215	0.36	+0.9
1,881,608	-		OH686_09215	0.36	+1.5
1,881,608	-		OH686_09215	0.36	-1.1
1,881,608	-		OH686_09215	0.36	-0.1
1,881,608	-		OH686_09215	0.36	+0.4
1,881,608	-		OH686_09215	0.36	+0.7
1,881,608	-		OH686_09215	0.36	-0.2
1,881,608	-		OH686_09215	0.36	-0.7
1,881,608	-		OH686_09215	0.36	-1.9
1,881,631	+		OH686_09215	0.38	+1.5
1,881,631	+		OH686_09215	0.38	+1.0
1,881,632	-		OH686_09215	0.38	-2.9
1,881,632	-		OH686_09215	0.38	-1.0
1,881,632	-		OH686_09215	0.38	-2.7
1,881,632	-		OH686_09215	0.38	-3.6
1,881,796	+		OH686_09215	0.50	-2.8
1,881,797	-		OH686_09215	0.50	-0.8
1,881,797	-		OH686_09215	0.50	-1.9
1,881,835	+		OH686_09215	0.53	-0.9
1,881,835	+		OH686_09215	0.53	-0.1
1,881,835	+		OH686_09215	0.53	-0.3
1,881,836	-		OH686_09215	0.53	+1.2
1,881,985	+		OH686_09215	0.64	-0.9
1,881,985	+		OH686_09215	0.64	-1.0
1,881,985	+		OH686_09215	0.64	+0.0
1,881,985	+		OH686_09215	0.64	+0.6
1,881,985	+		OH686_09215	0.64	+0.0
1,881,985	+		OH686_09215	0.64	-2.2
1,881,985	+		OH686_09215	0.64	+1.8
1,881,986	-		OH686_09215	0.64	+1.0
1,881,986	-		OH686_09215	0.64	+0.8
1,881,986	-		OH686_09215	0.64	+1.6
1,881,986	-		OH686_09215	0.64	+0.4
1,881,986	-		OH686_09215	0.64	+0.0
1,881,986	-		OH686_09215	0.64	-2.8
1,881,986	-		OH686_09215	0.64	-2.5
1,882,141	+		OH686_09215	0.76	-0.1
1,882,141	+		OH686_09215	0.76	+0.5
1,882,141	+		OH686_09215	0.76	+0.9
1,882,141	+		OH686_09215	0.76	+0.4
1,882,141	+		OH686_09215	0.76	-1.0
1,882,141	+		OH686_09215	0.76	-0.7
1,882,141	+		OH686_09215	0.76	-0.8
1,882,141	+		OH686_09215	0.76	+1.9
1,882,142	-		OH686_09215	0.76	+0.8
1,882,142	-		OH686_09215	0.76	-1.3
1,882,142	-		OH686_09215	0.76	-1.2
1,882,142	-		OH686_09215	0.76	+0.0
1,882,142	-		OH686_09215	0.76	+0.4
1,882,142	-		OH686_09215	0.76	-2.5
1,882,142	-		OH686_09215	0.76	-0.4
1,882,142	-		OH686_09215	0.76	+1.1
1,882,142	-		OH686_09215	0.76	+1.1
1,882,142	-		OH686_09215	0.76	-1.3
1,882,142	-		OH686_09215	0.76	+2.4
1,882,142	-		OH686_09215	0.76	-0.1
1,882,142	-		OH686_09215	0.76	-4.2
1,882,142	-		OH686_09215	0.76	-2.8
1,882,142	-		OH686_09215	0.76	-1.9
1,882,303	+		OH686_09215	0.88	-1.3
1,882,303	+		OH686_09215	0.88	-1.6
1,882,303	+		OH686_09215	0.88	+1.5
1,882,304	-		OH686_09215	0.88	+1.3
1,882,414	+				-2.7
1,882,414	+				-1.6
1,882,414	+				-1.0
1,882,414	+				-0.6
1,882,414	+				-1.5
1,882,414	+				-0.6
1,882,414	+				-2.0
1,882,414	+				-1.5
1,882,415	-				-0.5
1,882,415	-				-2.8
1,882,415	-				-1.0
1,882,568	+				-0.6
1,882,568	+				+0.1
1,882,568	+				+0.6
1,882,568	+				-0.6
1,882,568	+				-2.8
1,882,568	+				-0.1
1,882,569	-				-1.0
1,882,569	-				+3.0
1,882,569	-				-0.1
1,882,569	-				+0.3
1,882,569	-				-3.4
1,882,569	-				-1.4
1,882,569	-				-3.4
1,882,597	+				-3.3
1,882,719	+		OH686_09220	0.16	-2.1
1,882,719	+		OH686_09220	0.16	+2.6
1,882,719	+		OH686_09220	0.16	+1.6
1,882,719	+		OH686_09220	0.16	-1.2
1,882,719	+		OH686_09220	0.16	+2.6
1,882,719	+		OH686_09220	0.16	-2.3
1,882,719	+		OH686_09220	0.16	-0.0
1,882,719	+		OH686_09220	0.16	-2.2
1,882,719	+		OH686_09220	0.16	+2.1
1,882,720	-		OH686_09220	0.16	+0.2
1,882,759	+		OH686_09220	0.20	+1.5
1,882,760	-		OH686_09220	0.20	-0.6
1,882,807	+		OH686_09220	0.25	-2.3
1,882,808	-		OH686_09220	0.25	-0.1
1,882,808	-		OH686_09220	0.25	-0.1
1,882,808	-		OH686_09220	0.25	+0.2
1,882,918	+		OH686_09220	0.36	+1.4
1,882,918	+		OH686_09220	0.36	-0.3
1,882,919	-		OH686_09220	0.36	-1.7
1,882,919	-		OH686_09220	0.36	+0.2
1,882,919	-		OH686_09220	0.36	-0.8
1,882,984	+		OH686_09220	0.43	-2.1
1,882,984	+		OH686_09220	0.43	+0.0
1,882,984	+		OH686_09220	0.43	+0.7
1,882,984	+		OH686_09220	0.43	-0.2
1,882,984	+		OH686_09220	0.43	-1.6
1,882,984	+		OH686_09220	0.43	+0.2
1,882,984	+		OH686_09220	0.43	-1.7
1,882,984	+		OH686_09220	0.43	-1.8
1,882,985	-		OH686_09220	0.43	-0.1
1,882,985	-		OH686_09220	0.43	-0.4
1,882,985	-		OH686_09220	0.43	-0.1
1,882,985	-		OH686_09220	0.43	-0.6
1,883,120	-		OH686_09220	0.56	-0.8
1,883,120	-		OH686_09220	0.56	+0.2
1,883,146	+		OH686_09220	0.59	-0.4
1,883,146	+		OH686_09220	0.59	+1.0
1,883,218	+		OH686_09220	0.66	-2.6
1,883,218	+		OH686_09220	0.66	+0.8
1,883,218	+		OH686_09220	0.66	-0.4
1,883,218	+		OH686_09220	0.66	-0.4
1,883,218	+		OH686_09220	0.66	-0.9
1,883,218	+		OH686_09220	0.66	+0.4
1,883,218	+		OH686_09220	0.66	-2.0
1,883,218	+		OH686_09220	0.66	-0.0
1,883,218	+		OH686_09220	0.66	-0.3
1,883,218	+		OH686_09220	0.66	+1.6
1,883,218	+		OH686_09220	0.66	+2.4
1,883,218	+		OH686_09220	0.66	+0.3
1,883,218	+		OH686_09220	0.66	-1.8
1,883,218	+		OH686_09220	0.66	+0.9
1,883,219	-		OH686_09220	0.66	-0.4
1,883,219	-		OH686_09220	0.66	-1.4
1,883,219	-		OH686_09220	0.66	-2.4
1,883,219	-		OH686_09220	0.66	-0.4
1,883,219	-		OH686_09220	0.66	+1.6
1,883,219	-		OH686_09220	0.66	-1.4
1,883,219	-		OH686_09220	0.66	-0.4
1,883,219	-		OH686_09220	0.66	-1.4
1,883,219	-		OH686_09220	0.66	-0.1
1,883,219	-		OH686_09220	0.66	+1.9
1,883,219	-		OH686_09220	0.66	+0.5
1,883,219	-		OH686_09220	0.66	-2.0
1,883,220	+		OH686_09220	0.66	+2.3
1,883,220	+		OH686_09220	0.66	-0.3
1,883,220	+		OH686_09220	0.66	+1.5
1,883,220	+		OH686_09220	0.66	+0.4
1,883,220	+		OH686_09220	0.66	-0.2
1,883,220	+		OH686_09220	0.66	-0.5
1,883,221	-		OH686_09220	0.66	-1.5
1,883,221	-		OH686_09220	0.66	+0.6
1,883,221	-		OH686_09220	0.66	+0.7
1,883,221	-		OH686_09220	0.66	-1.0
1,883,221	-		OH686_09220	0.66	-3.0
1,883,221	-		OH686_09220	0.66	+0.3
1,883,221	-		OH686_09220	0.66	+0.8
1,883,221	-		OH686_09220	0.66	+0.2
1,883,221	-		OH686_09220	0.66	+1.4
1,883,221	-		OH686_09220	0.66	-2.9
1,883,434	-		OH686_09220	0.88	-0.0
1,883,434	-		OH686_09220	0.88	-0.7