Strain Fitness in Pseudomonas sp. S08-1 around OH686_09205

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,879,347	+				-0.4
1,879,347	+				-3.2
1,879,347	+				-1.3
1,879,348	-				-1.6
1,879,348	-				-0.4
1,879,348	-				+0.5
1,879,348	-				-1.1
1,879,348	-				-3.5
1,879,348	-				-0.3
1,879,447	+		OH686_09200	0.17	-3.3
1,879,447	+		OH686_09200	0.17	+0.5
1,879,447	+		OH686_09200	0.17	-1.1
1,879,447	+		OH686_09200	0.17	-1.5
1,879,447	+		OH686_09200	0.17	+0.7
1,879,447	+		OH686_09200	0.17	-0.1
1,879,447	+		OH686_09200	0.17	-0.3
1,879,447	+		OH686_09200	0.17	-2.3
1,879,448	-		OH686_09200	0.17	-2.1
1,879,448	-		OH686_09200	0.17	+0.2
1,879,448	-		OH686_09200	0.17	-2.0
1,879,448	-		OH686_09200	0.17	-1.6
1,879,448	-		OH686_09200	0.17	+0.4
1,879,598	+		OH686_09200	0.41	-0.4
1,879,717	+		OH686_09200	0.60	-3.5
1,879,717	+		OH686_09200	0.60	-2.1
1,879,717	+		OH686_09200	0.60	-3.0
1,879,717	+		OH686_09200	0.60	-3.1
1,879,717	+		OH686_09200	0.60	-0.1
1,879,717	+		OH686_09200	0.60	-0.8
1,879,717	+		OH686_09200	0.60	-0.6
1,879,717	+		OH686_09200	0.60	-3.0
1,879,718	-		OH686_09200	0.60	+1.2
1,879,718	-		OH686_09200	0.60	-1.1
1,879,718	-		OH686_09200	0.60	-1.1
1,879,718	-		OH686_09200	0.60	+2.3
1,879,718	-		OH686_09200	0.60	+1.0
1,879,718	-		OH686_09200	0.60	+0.2
1,879,718	-		OH686_09200	0.60	+0.0
1,879,718	-		OH686_09200	0.60	+0.6
1,879,718	-		OH686_09200	0.60	-0.2
1,879,718	-		OH686_09200	0.60	-0.1
1,879,718	-		OH686_09200	0.60	+0.1
1,879,718	-		OH686_09200	0.60	-2.2
1,879,718	-		OH686_09200	0.60	+0.3
1,879,718	-		OH686_09200	0.60	+0.1
1,879,718	-		OH686_09200	0.60	+0.0
1,879,718	-		OH686_09200	0.60	-1.5
1,879,726	+		OH686_09200	0.61	-2.4
1,879,726	+		OH686_09200	0.61	-2.8
1,879,726	+		OH686_09200	0.61	-3.1
1,879,726	+		OH686_09200	0.61	-3.0
1,879,726	+		OH686_09200	0.61	-3.0
1,879,726	+		OH686_09200	0.61	-5.0
1,879,727	-		OH686_09200	0.61	+0.8
1,879,727	-		OH686_09200	0.61	-1.7
1,879,727	-		OH686_09200	0.61	+0.2
1,879,740	+		OH686_09200	0.63	-2.1
1,879,741	-		OH686_09200	0.63	-0.1
1,879,855	+		OH686_09200	0.82	-2.5
1,879,872	+		OH686_09200	0.84	-3.5
1,879,872	+		OH686_09200	0.84	-3.9
1,879,873	-		OH686_09200	0.84	+0.7
1,879,873	-		OH686_09200	0.84	-3.0
1,879,873	-		OH686_09200	0.84	+0.8
1,879,873	-		OH686_09200	0.84	+0.8
1,879,873	-		OH686_09200	0.84	-0.5
1,879,873	-		OH686_09200	0.84	+0.5
1,879,873	-		OH686_09200	0.84	+0.5
1,879,873	-		OH686_09200	0.84	+0.3
1,879,897	-		OH686_09200	0.88	+1.9
1,879,968	+				-0.4
1,879,968	+				-3.3
1,879,969	-				-1.1
1,879,984	+				+2.0
1,879,985	-				-4.7
1,879,985	-				-2.4
1,879,985	-				-2.5
1,879,991	+				+1.3
1,879,991	+				-1.0
1,879,991	+				+1.3
1,879,991	+				-1.2
1,879,991	+				-3.1
1,879,992	-				-2.1
1,879,992	-				-3.2
1,879,992	-				-2.7
1,879,992	-				-1.1
1,879,992	-				-3.6
1,879,992	-				-2.1
1,879,992	-				-0.4
1,879,992	-				-2.7
1,879,992	-				-3.9
1,879,992	-				-3.8
1,880,254	+		OH686_09205	0.32	-1.7
1,880,254	+		OH686_09205	0.32	-3.6
1,880,254	+		OH686_09205	0.32	-3.4
1,880,254	+		OH686_09205	0.32	-4.8
1,880,276	-		OH686_09205	0.35	-2.8
1,880,422	+		OH686_09205	0.60	-3.2
1,880,422	+		OH686_09205	0.60	-2.9
1,880,422	+		OH686_09205	0.60	-1.4
1,880,422	+		OH686_09205	0.60	-2.5
1,880,423	-		OH686_09205	0.60	-5.6
1,880,423	-		OH686_09205	0.60	-2.8
1,880,423	-		OH686_09205	0.60	-2.8
1,880,423	-		OH686_09205	0.60	-3.3
1,880,423	-		OH686_09205	0.60	-3.4
1,880,423	-		OH686_09205	0.60	-2.3
1,880,423	-		OH686_09205	0.60	-1.7
1,880,423	-		OH686_09205	0.60	-3.4
1,880,423	-		OH686_09205	0.60	-3.1
1,880,423	-		OH686_09205	0.60	-3.4
1,880,543	+		OH686_09205	0.80	-2.6
1,880,543	+		OH686_09205	0.80	+0.2
1,880,543	+		OH686_09205	0.80	-3.6
1,880,543	+		OH686_09205	0.80	-3.5
1,880,543	+		OH686_09205	0.80	-4.2
1,880,544	-		OH686_09205	0.80	-4.0
1,880,544	-		OH686_09205	0.80	-3.8
1,880,544	-		OH686_09205	0.80	-2.6
1,880,544	-		OH686_09205	0.80	-4.4
1,880,554	+		OH686_09205	0.82	-4.0
1,880,555	-		OH686_09205	0.82	-3.9
1,880,555	-		OH686_09205	0.82	-3.8
1,880,555	-		OH686_09205	0.82	-3.4
1,880,555	-		OH686_09205	0.82	-5.0
1,880,662	+				+0.8
1,880,662	+				-0.3
1,880,662	+				+1.3
1,880,662	+				-0.8
1,880,663	-				-3.1
1,880,663	-				-3.0
1,880,663	-				-1.8
1,880,676	+				-0.3
1,880,676	+				-2.6
1,880,676	+				-0.3
1,880,676	+				-0.2
1,880,676	+				+0.6
1,880,677	-				+2.3
1,880,677	-				-2.1
1,880,677	-				-4.5
1,880,919	+		OH686_09210	0.75	-2.6
1,880,919	+		OH686_09210	0.75	+0.3
1,880,919	+		OH686_09210	0.75	-4.0
1,880,919	+		OH686_09210	0.75	-0.5
1,880,919	+		OH686_09210	0.75	-4.3
1,880,919	+		OH686_09210	0.75	-2.0
1,880,919	+		OH686_09210	0.75	-3.3
1,880,920	-		OH686_09210	0.76	-2.0
1,880,920	-		OH686_09210	0.76	-1.4
1,880,920	-		OH686_09210	0.76	-0.1
1,880,920	-		OH686_09210	0.76	-3.7
1,880,934	+		OH686_09210	0.80	+0.1
1,880,934	+		OH686_09210	0.80	+1.3
1,880,934	+		OH686_09210	0.80	+1.1
1,880,934	+		OH686_09210	0.80	-2.7
1,880,934	+		OH686_09210	0.80	+1.4
1,880,934	+		OH686_09210	0.80	+0.3
1,880,934	+		OH686_09210	0.80	-1.5
1,880,934	+		OH686_09210	0.80	+1.1
1,880,934	+		OH686_09210	0.80	-0.6
1,880,934	+		OH686_09210	0.80	-2.4
1,880,934	+		OH686_09210	0.80	+1.1
1,880,934	+		OH686_09210	0.80	-3.4
1,880,934	+		OH686_09210	0.80	+1.2
1,880,934	+		OH686_09210	0.80	+0.4
1,880,935	-		OH686_09210	0.80	+0.8
1,880,935	-		OH686_09210	0.80	-2.2
1,880,935	-		OH686_09210	0.80	-0.4
1,880,935	-		OH686_09210	0.80	-1.7
1,880,943	+		OH686_09210	0.83	+0.8
1,880,943	+		OH686_09210	0.83	+1.2
1,880,943	+		OH686_09210	0.83	-2.4
1,880,944	-		OH686_09210	0.83	-1.4
1,880,944	-		OH686_09210	0.83	-2.5
1,880,944	-		OH686_09210	0.83	-1.9
1,880,944	-		OH686_09210	0.83	-0.8
1,880,976	+				+0.7
1,880,976	+				+1.4
1,880,976	+				-0.7
1,880,976	+				+1.1
1,880,976	+				-2.2
1,880,976	+				+0.3
1,880,976	+				+2.4
1,880,976	+				-2.2
1,880,976	+				+0.3
1,880,976	+				+1.8
1,880,976	+				-2.0
1,880,976	+				+0.1
1,880,976	+				+0.5
1,880,977	-				-3.1
1,880,977	-				+0.6
1,880,977	-				-2.8
1,880,977	-				-2.0
1,880,977	-				-2.9
1,880,977	-				-2.9
1,880,977	-				-2.5
1,880,977	-				-0.6
1,880,977	-				-2.4
1,880,977	-				+0.3
1,880,977	-				-1.9
1,880,977	-				-2.6
1,880,998	+				+0.2
1,880,998	+				+0.2
1,880,998	+				-1.2
1,880,998	+				+0.1
1,880,998	+				+1.7
1,880,998	+				-3.7
1,880,999	-				-4.2
1,880,999	-				-3.6
1,880,999	-				-1.9
1,880,999	-				-4.2
1,881,011	-				-0.9
1,881,011	-				-2.8
1,881,044	-				-0.9
1,881,067	+				-0.6
1,881,067	+				+1.6
1,881,068	-				-3.6
1,881,090	+				+1.1
1,881,090	+				+2.0
1,881,090	+				+0.7
1,881,090	+				+0.3
1,881,090	+				+1.4
1,881,090	+				-0.7
1,881,091	-				-2.0
1,881,091	-				-0.4
1,881,091	-				-3.0
1,881,091	-				-1.8
1,881,091	-				-2.9
1,881,091	-				-0.1
1,881,091	-				-2.0
1,881,092	+				+2.3
1,881,092	+				+1.5
1,881,092	+				+0.2
1,881,092	+				-2.6
1,881,093	-				-0.5
1,881,093	-				-1.0
1,881,093	-				-0.3
1,881,093	-				-0.4
1,881,093	-				-2.8
1,881,093	-				-0.5
1,881,093	-				-3.0
1,881,145	+				-1.0
1,881,145	+				-0.2
1,881,145	+				+1.2
1,881,145	+				-0.3
1,881,145	+				-0.4
1,881,145	+				+0.9
1,881,145	+				-0.1
1,881,146	-				-0.2
1,881,146	-				-0.5
1,881,146	-				+0.3
1,881,146	-				-2.3
1,881,146	-				+0.5
1,881,146	-				+0.7
1,881,146	-				-3.3
1,881,146	-				-0.4
1,881,147	+				+0.1
1,881,147	+				-0.8
1,881,147	+				+1.9
1,881,147	+				-2.0
1,881,147	+				-3.1
1,881,148	-				+0.3
1,881,148	-				-1.0
1,881,148	-				+0.6
1,881,148	-				-3.1
1,881,179	-				-2.0
1,881,179	-				-1.6
1,881,270	+		OH686_09215	0.11	-0.2
1,881,271	-		OH686_09215	0.11	+0.2
1,881,421	+		OH686_09215	0.22	-1.9
1,881,421	+		OH686_09215	0.22	-3.0
1,881,421	+		OH686_09215	0.22	-3.2
1,881,422	-		OH686_09215	0.22	-2.8
1,881,607	+		OH686_09215	0.36	-0.5
1,881,607	+		OH686_09215	0.36	-1.0
1,881,607	+		OH686_09215	0.36	-0.4
1,881,607	+		OH686_09215	0.36	+2.2
1,881,607	+		OH686_09215	0.36	-1.0
1,881,607	+		OH686_09215	0.36	+0.8
1,881,607	+		OH686_09215	0.36	-0.1
1,881,607	+		OH686_09215	0.36	-1.5
1,881,608	-		OH686_09215	0.36	+0.9
1,881,608	-		OH686_09215	0.36	+1.5
1,881,608	-		OH686_09215	0.36	-1.1
1,881,608	-		OH686_09215	0.36	-0.1
1,881,608	-		OH686_09215	0.36	+0.4
1,881,608	-		OH686_09215	0.36	+0.7
1,881,608	-		OH686_09215	0.36	-0.2
1,881,608	-		OH686_09215	0.36	-0.7
1,881,608	-		OH686_09215	0.36	-1.9
1,881,631	+		OH686_09215	0.38	+1.5
1,881,631	+		OH686_09215	0.38	+1.0
1,881,632	-		OH686_09215	0.38	-2.9
1,881,632	-		OH686_09215	0.38	-1.0
1,881,632	-		OH686_09215	0.38	-2.7
1,881,632	-		OH686_09215	0.38	-3.6