Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_04580 and OH686_04585 are separated by 187 nucleotides OH686_04585 and OH686_04590 are separated by 67 nucleotides OH686_04590 and OH686_04595 are separated by 377 nucleotides OH686_04595 and OH686_04600 are separated by 68 nucleotides
OH686_04580: OH686_04580 - excinuclease ABC subunit B, at 950,996 to 953,011
_04580
OH686_04585: OH686_04585 - Biosynthetic Aromatic amino acid aminotransferase alpha or Aromatic-amino-acid aminotransferase , at 953,199 to 954,395
_04585
OH686_04590: OH686_04590 - tRNA-Asn, at 954,463 to 954,538
_04590
OH686_04595: OH686_04595 - hypothetical protein, at 954,916 to 955,275
_04595
OH686_04600: OH686_04600 - hypothetical protein, at 955,344 to 955,661
_04600
Position (kb) 953
954
955 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 952.269 kb on + strand, within OH686_04580 at 952.270 kb on - strand, within OH686_04580 at 952.270 kb on - strand, within OH686_04580 at 952.270 kb on - strand, within OH686_04580 at 952.270 kb on - strand, within OH686_04580 at 952.270 kb on - strand, within OH686_04580 at 952.270 kb on - strand, within OH686_04580 at 952.270 kb on - strand, within OH686_04580 at 952.285 kb on - strand, within OH686_04580 at 952.285 kb on - strand, within OH686_04580 at 952.473 kb on + strand, within OH686_04580 at 952.473 kb on + strand, within OH686_04580 at 952.474 kb on - strand, within OH686_04580 at 952.474 kb on - strand, within OH686_04580 at 952.474 kb on - strand, within OH686_04580 at 952.474 kb on - strand, within OH686_04580 at 952.474 kb on - strand, within OH686_04580 at 952.554 kb on + strand, within OH686_04580 at 952.555 kb on - strand, within OH686_04580 at 952.555 kb on - strand, within OH686_04580 at 952.555 kb on - strand, within OH686_04580 at 952.578 kb on + strand, within OH686_04580 at 952.579 kb on - strand, within OH686_04580 at 952.579 kb on - strand, within OH686_04580 at 952.582 kb on + strand, within OH686_04580 at 952.583 kb on - strand, within OH686_04580 at 952.583 kb on - strand, within OH686_04580 at 952.583 kb on - strand, within OH686_04580 at 952.583 kb on - strand, within OH686_04580 at 952.583 kb on - strand, within OH686_04580 at 952.583 kb on - strand, within OH686_04580 at 952.583 kb on - strand, within OH686_04580 at 952.583 kb on - strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.713 kb on + strand, within OH686_04580 at 952.714 kb on - strand, within OH686_04580 at 952.714 kb on - strand, within OH686_04580 at 952.714 kb on - strand, within OH686_04580 at 952.714 kb on - strand, within OH686_04580 at 952.714 kb on - strand, within OH686_04580 at 952.714 kb on - strand, within OH686_04580 at 952.714 kb on - strand, within OH686_04580 at 952.714 kb on - strand, within OH686_04580 at 952.728 kb on + strand, within OH686_04580 at 952.729 kb on - strand, within OH686_04580 at 952.729 kb on - strand, within OH686_04580 at 952.729 kb on - strand, within OH686_04580 at 952.729 kb on - strand, within OH686_04580 at 952.731 kb on + strand, within OH686_04580 at 952.731 kb on + strand, within OH686_04580 at 952.731 kb on + strand, within OH686_04580 at 952.731 kb on + strand, within OH686_04580 at 952.732 kb on - strand, within OH686_04580 at 952.732 kb on - strand, within OH686_04580 at 952.732 kb on - strand, within OH686_04580 at 952.732 kb on - strand, within OH686_04580 at 952.737 kb on + strand, within OH686_04580 at 952.737 kb on + strand, within OH686_04580 at 952.738 kb on - strand, within OH686_04580 at 952.740 kb on + strand, within OH686_04580 at 952.741 kb on - strand, within OH686_04580 at 952.741 kb on - strand, within OH686_04580 at 952.753 kb on - strand, within OH686_04580 at 952.794 kb on + strand, within OH686_04580 at 952.794 kb on + strand, within OH686_04580 at 952.794 kb on + strand, within OH686_04580 at 952.795 kb on - strand, within OH686_04580 at 952.795 kb on - strand, within OH686_04580 at 952.795 kb on - strand, within OH686_04580 at 952.795 kb on - strand, within OH686_04580 at 952.795 kb on - strand, within OH686_04580 at 953.059 kb on + strand at 953.059 kb on + strand at 953.059 kb on + strand at 953.059 kb on + strand at 953.059 kb on + strand at 953.060 kb on - strand at 953.060 kb on - strand at 953.060 kb on - strand at 953.060 kb on - strand at 953.060 kb on - strand at 953.060 kb on - strand at 953.108 kb on + strand at 953.109 kb on - strand at 953.109 kb on - strand at 953.110 kb on + strand at 953.110 kb on + strand at 953.110 kb on + strand at 953.111 kb on - strand at 953.111 kb on - strand at 953.111 kb on - strand at 953.111 kb on - strand at 953.113 kb on + strand at 953.114 kb on - strand at 953.303 kb on - strand at 953.303 kb on - strand at 953.310 kb on + strand at 953.310 kb on + strand at 953.310 kb on + strand at 953.310 kb on + strand at 953.310 kb on + strand at 953.310 kb on + strand at 953.310 kb on + strand at 953.310 kb on + strand at 953.310 kb on + strand at 953.311 kb on - strand at 953.311 kb on - strand at 953.311 kb on - strand at 953.311 kb on - strand at 953.311 kb on - strand at 953.311 kb on - strand at 953.313 kb on + strand at 953.313 kb on + strand at 953.313 kb on + strand at 953.313 kb on + strand at 953.313 kb on + strand at 953.314 kb on - strand at 953.314 kb on - strand at 953.314 kb on - strand at 953.314 kb on - strand at 953.314 kb on - strand at 953.314 kb on - strand at 953.314 kb on - strand at 953.397 kb on + strand, within OH686_04585 at 953.424 kb on + strand, within OH686_04585 at 953.425 kb on - strand, within OH686_04585 at 953.438 kb on - strand, within OH686_04585 at 953.438 kb on - strand, within OH686_04585 at 953.643 kb on + strand, within OH686_04585 at 953.643 kb on + strand, within OH686_04585 at 953.643 kb on + strand, within OH686_04585 at 953.643 kb on + strand, within OH686_04585 at 953.643 kb on + strand, within OH686_04585 at 953.644 kb on - strand, within OH686_04585 at 953.644 kb on - strand, within OH686_04585 at 953.644 kb on - strand, within OH686_04585 at 953.644 kb on - strand, within OH686_04585 at 953.644 kb on - strand, within OH686_04585 at 953.644 kb on - strand, within OH686_04585 at 953.649 kb on + strand, within OH686_04585 at 953.649 kb on + strand, within OH686_04585 at 953.649 kb on + strand, within OH686_04585 at 953.650 kb on - strand, within OH686_04585 at 953.650 kb on - strand, within OH686_04585 at 953.650 kb on - strand, within OH686_04585 at 953.650 kb on - strand, within OH686_04585 at 953.652 kb on + strand, within OH686_04585 at 953.652 kb on + strand, within OH686_04585 at 953.652 kb on + strand, within OH686_04585 at 953.797 kb on + strand, within OH686_04585 at 953.797 kb on + strand, within OH686_04585 at 953.797 kb on + strand, within OH686_04585 at 953.797 kb on + strand, within OH686_04585 at 953.798 kb on - strand, within OH686_04585 at 953.798 kb on - strand, within OH686_04585 at 953.798 kb on - strand, within OH686_04585 at 953.955 kb on + strand, within OH686_04585 at 954.051 kb on + strand, within OH686_04585 at 954.051 kb on + strand, within OH686_04585 at 954.052 kb on - strand, within OH686_04585 at 954.052 kb on - strand, within OH686_04585 at 954.052 kb on - strand, within OH686_04585 at 954.052 kb on - strand, within OH686_04585 at 954.052 kb on - strand, within OH686_04585 at 954.252 kb on + strand, within OH686_04585 at 954.253 kb on - strand, within OH686_04585 at 954.306 kb on + strand at 954.306 kb on + strand at 954.306 kb on + strand at 954.306 kb on + strand at 954.306 kb on + strand at 954.306 kb on + strand at 954.306 kb on + strand at 954.306 kb on + strand at 954.306 kb on + strand at 954.306 kb on + strand at 954.307 kb on - strand at 954.307 kb on - strand at 954.307 kb on - strand at 954.307 kb on - strand at 954.307 kb on - strand at 954.307 kb on - strand at 954.388 kb on + strand at 954.389 kb on - strand at 954.471 kb on - strand, within OH686_04590 at 954.552 kb on + strand at 954.552 kb on + strand at 954.552 kb on + strand at 954.553 kb on - strand at 954.553 kb on - strand at 954.553 kb on - strand at 954.576 kb on + strand at 954.576 kb on + strand at 954.576 kb on + strand at 954.617 kb on - strand at 954.733 kb on - strand at 954.739 kb on + strand at 954.739 kb on + strand at 954.739 kb on + strand at 954.857 kb on + strand at 954.858 kb on - strand at 954.859 kb on + strand at 954.859 kb on + strand at 954.859 kb on + strand at 954.859 kb on + strand at 954.860 kb on - strand at 954.860 kb on - strand at 954.860 kb on - strand at 954.860 kb on - strand at 955.205 kb on + strand, within OH686_04595 at 955.205 kb on + strand, within OH686_04595 at 955.206 kb on - strand, within OH686_04595 at 955.206 kb on - strand, within OH686_04595 at 955.208 kb on + strand, within OH686_04595 at 955.208 kb on + strand, within OH686_04595 at 955.208 kb on + strand, within OH686_04595 at 955.209 kb on - strand, within OH686_04595 at 955.251 kb on + strand at 955.251 kb on + strand at 955.251 kb on + strand at 955.251 kb on + strand at 955.252 kb on - strand at 955.252 kb on - strand at 955.252 kb on - strand at 955.252 kb on - strand at 955.252 kb on - strand at 955.252 kb on - strand at 955.252 kb on - strand at 955.252 kb on - strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.255 kb on + strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.256 kb on - strand at 955.311 kb on + strand at 955.384 kb on - strand, within OH686_04600
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 952,269 + OH686_04580 0.63 +1.4 952,270 - OH686_04580 0.63 +1.8 952,270 - OH686_04580 0.63 -0.0 952,270 - OH686_04580 0.63 +0.7 952,270 - OH686_04580 0.63 -0.4 952,270 - OH686_04580 0.63 +1.0 952,270 - OH686_04580 0.63 +1.0 952,270 - OH686_04580 0.63 -3.1 952,285 - OH686_04580 0.64 -0.9 952,285 - OH686_04580 0.64 +2.2 952,473 + OH686_04580 0.73 +0.5 952,473 + OH686_04580 0.73 +0.2 952,474 - OH686_04580 0.73 +1.9 952,474 - OH686_04580 0.73 +1.6 952,474 - OH686_04580 0.73 +2.2 952,474 - OH686_04580 0.73 +0.6 952,474 - OH686_04580 0.73 +1.9 952,554 + OH686_04580 0.77 +0.5 952,555 - OH686_04580 0.77 +1.0 952,555 - OH686_04580 0.77 +1.9 952,555 - OH686_04580 0.77 +2.7 952,578 + OH686_04580 0.78 +1.3 952,579 - OH686_04580 0.79 +1.0 952,579 - OH686_04580 0.79 +0.8 952,582 + OH686_04580 0.79 -0.5 952,583 - OH686_04580 0.79 -2.2 952,583 - OH686_04580 0.79 +0.2 952,583 - OH686_04580 0.79 -2.0 952,583 - OH686_04580 0.79 +0.5 952,583 - OH686_04580 0.79 +0.3 952,583 - OH686_04580 0.79 +1.1 952,583 - OH686_04580 0.79 -2.0 952,583 - OH686_04580 0.79 +0.9 952,713 + OH686_04580 0.85 -1.5 952,713 + OH686_04580 0.85 +0.4 952,713 + OH686_04580 0.85 +0.1 952,713 + OH686_04580 0.85 +1.6 952,713 + OH686_04580 0.85 -1.2 952,713 + OH686_04580 0.85 +1.3 952,713 + OH686_04580 0.85 +0.0 952,713 + OH686_04580 0.85 -1.0 952,713 + OH686_04580 0.85 +0.3 952,713 + OH686_04580 0.85 +0.7 952,713 + OH686_04580 0.85 +0.6 952,713 + OH686_04580 0.85 +1.1 952,713 + OH686_04580 0.85 +0.8 952,714 - OH686_04580 0.85 -0.5 952,714 - OH686_04580 0.85 +0.9 952,714 - OH686_04580 0.85 +0.9 952,714 - OH686_04580 0.85 +2.6 952,714 - OH686_04580 0.85 +3.3 952,714 - OH686_04580 0.85 -1.4 952,714 - OH686_04580 0.85 +0.2 952,714 - OH686_04580 0.85 +1.2 952,728 + OH686_04580 0.86 +2.0 952,729 - OH686_04580 0.86 +3.5 952,729 - OH686_04580 0.86 -0.0 952,729 - OH686_04580 0.86 +2.0 952,729 - OH686_04580 0.86 -0.9 952,731 + OH686_04580 0.86 -1.3 952,731 + OH686_04580 0.86 +1.6 952,731 + OH686_04580 0.86 +1.7 952,731 + OH686_04580 0.86 +1.1 952,732 - OH686_04580 0.86 -0.7 952,732 - OH686_04580 0.86 +0.1 952,732 - OH686_04580 0.86 +0.7 952,732 - OH686_04580 0.86 +1.0 952,737 + OH686_04580 0.86 +0.7 952,737 + OH686_04580 0.86 -3.1 952,738 - OH686_04580 0.86 +0.3 952,740 + OH686_04580 0.87 +1.1 952,741 - OH686_04580 0.87 -1.0 952,741 - OH686_04580 0.87 -0.0 952,753 - OH686_04580 0.87 -2.5 952,794 + OH686_04580 0.89 +1.2 952,794 + OH686_04580 0.89 +2.4 952,794 + OH686_04580 0.89 +1.7 952,795 - OH686_04580 0.89 -0.6 952,795 - OH686_04580 0.89 +0.9 952,795 - OH686_04580 0.89 -3.2 952,795 - OH686_04580 0.89 -0.6 952,795 - OH686_04580 0.89 -0.4 953,059 + -2.8 953,059 + -1.0 953,059 + +0.8 953,059 + +0.7 953,059 + -0.7 953,060 - +0.2 953,060 - +3.6 953,060 - +1.1 953,060 - +2.1 953,060 - +0.6 953,060 - +1.8 953,108 + +1.6 953,109 - +1.5 953,109 - -0.6 953,110 + -0.4 953,110 + -2.2 953,110 + -2.5 953,111 - -1.6 953,111 - -2.2 953,111 - -1.6 953,111 - -1.8 953,113 + -2.0 953,114 - -3.1 953,303 - -3.0 953,303 - -1.4 953,310 + -1.0 953,310 + -3.1 953,310 + -1.3 953,310 + -3.7 953,310 + -3.1 953,310 + -1.4 953,310 + -0.7 953,310 + -2.8 953,310 + -2.9 953,311 - +0.5 953,311 - -2.0 953,311 - -3.0 953,311 - -1.7 953,311 - -2.8 953,311 - -3.3 953,313 + -2.0 953,313 + -2.6 953,313 + -2.3 953,313 + -1.0 953,313 + -3.1 953,314 - -3.2 953,314 - -2.2 953,314 - -1.2 953,314 - -3.9 953,314 - -1.5 953,314 - -1.6 953,314 - -0.9 953,397 + OH686_04585 0.17 -1.3 953,424 + OH686_04585 0.19 -1.2 953,425 - OH686_04585 0.19 -3.2 953,438 - OH686_04585 0.20 -1.9 953,438 - OH686_04585 0.20 -0.5 953,643 + OH686_04585 0.37 -0.4 953,643 + OH686_04585 0.37 -0.5 953,643 + OH686_04585 0.37 -2.2 953,643 + OH686_04585 0.37 -0.0 953,643 + OH686_04585 0.37 -3.4 953,644 - OH686_04585 0.37 +0.7 953,644 - OH686_04585 0.37 -2.3 953,644 - OH686_04585 0.37 -1.2 953,644 - OH686_04585 0.37 -1.5 953,644 - OH686_04585 0.37 -5.1 953,644 - OH686_04585 0.37 -1.3 953,649 + OH686_04585 0.38 -0.0 953,649 + OH686_04585 0.38 -1.3 953,649 + OH686_04585 0.38 -0.9 953,650 - OH686_04585 0.38 -2.0 953,650 - OH686_04585 0.38 -1.3 953,650 - OH686_04585 0.38 -3.9 953,650 - OH686_04585 0.38 -0.2 953,652 + OH686_04585 0.38 -1.5 953,652 + OH686_04585 0.38 -3.4 953,652 + OH686_04585 0.38 -1.3 953,797 + OH686_04585 0.50 -3.5 953,797 + OH686_04585 0.50 -4.5 953,797 + OH686_04585 0.50 -2.5 953,797 + OH686_04585 0.50 -1.8 953,798 - OH686_04585 0.50 -2.6 953,798 - OH686_04585 0.50 -2.7 953,798 - OH686_04585 0.50 -1.5 953,955 + OH686_04585 0.63 -2.8 954,051 + OH686_04585 0.71 -1.8 954,051 + OH686_04585 0.71 -2.8 954,052 - OH686_04585 0.71 -1.6 954,052 - OH686_04585 0.71 -3.0 954,052 - OH686_04585 0.71 -1.6 954,052 - OH686_04585 0.71 -2.6 954,052 - OH686_04585 0.71 -0.5 954,252 + OH686_04585 0.88 -0.3 954,253 - OH686_04585 0.88 -1.4 954,306 + -2.4 954,306 + -1.2 954,306 + -2.3 954,306 + -2.5 954,306 + -2.6 954,306 + -1.8 954,306 + -1.4 954,306 + -0.0 954,306 + -1.5 954,306 + -3.6 954,307 - -0.7 954,307 - -3.6 954,307 - -3.5 954,307 - -1.6 954,307 - -3.2 954,307 - -3.3 954,388 + -3.0 954,389 - +0.1 954,471 - OH686_04590 0.11 -0.9 954,552 + +0.8 954,552 + -1.8 954,552 + +0.7 954,553 - +0.4 954,553 - +0.3 954,553 - +1.5 954,576 + -0.7 954,576 + +0.3 954,576 + -0.0 954,617 - +0.7 954,733 - +1.8 954,739 + +0.8 954,739 + -0.2 954,739 + +2.1 954,857 + -2.7 954,858 - -3.2 954,859 + +0.2 954,859 + -0.0 954,859 + +2.1 954,859 + -0.7 954,860 - +0.3 954,860 - +2.1 954,860 - -0.8 954,860 - -2.5 955,205 + OH686_04595 0.80 +2.2 955,205 + OH686_04595 0.80 -3.2 955,206 - OH686_04595 0.81 +3.5 955,206 - OH686_04595 0.81 +0.9 955,208 + OH686_04595 0.81 +1.2 955,208 + OH686_04595 0.81 -0.1 955,208 + OH686_04595 0.81 +2.9 955,209 - OH686_04595 0.81 -0.9 955,251 + -1.1 955,251 + +2.3 955,251 + +0.6 955,251 + +0.0 955,252 - -2.9 955,252 - +4.2 955,252 - -1.8 955,252 - +2.1 955,252 - -0.5 955,252 - -0.9 955,252 - +1.5 955,252 - +4.3 955,255 + -1.4 955,255 + +2.7 955,255 + -0.1 955,255 + +3.2 955,255 + +1.6 955,255 + +2.1 955,255 + -0.9 955,255 + -1.9 955,255 + +0.7 955,255 + +2.6 955,255 + +0.3 955,255 + +0.7 955,255 + +4.2 955,255 + +2.1 955,255 + +0.4 955,255 + -2.4 955,255 + +2.1 955,255 + +2.3 955,255 + +1.8 955,255 + -0.2 955,255 + +0.8 955,256 - +4.2 955,256 - +0.7 955,256 - +2.3 955,256 - +0.7 955,256 - +1.0 955,256 - +1.4 955,256 - +2.8 955,256 - -1.9 955,256 - +1.6 955,256 - +2.0 955,256 - -3.9 955,256 - +2.8 955,256 - +4.0 955,256 - +2.3 955,256 - +2.8 955,256 - +0.4 955,256 - +1.5 955,256 - -2.6 955,256 - +1.1 955,311 + +1.1 955,384 - OH686_04600 0.13 -2.2
Or see this region's nucleotide sequence