Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_04420 and OH686_04425 are separated by 42 nucleotides OH686_04425 and OH686_04430 are separated by 92 nucleotides OH686_04430 and OH686_04435 overlap by 17 nucleotides
OH686_04420: OH686_04420 - amidophosphoribosyltransferase, at 919,452 to 920,957
_04420
OH686_04425: OH686_04425 - Colicin V production protein, at 921,000 to 921,554
_04425
OH686_04430: OH686_04430 - Septum-associated cell division protein DedD, at 921,647 to 922,267
_04430
OH686_04435: OH686_04435 - Dihydrofolate synthase or Folylpolyglutamate synthase , at 922,251 to 923,549
_04435
Position (kb) 920
921
922 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 920.976 kb on - strand at 920.976 kb on - strand at 920.988 kb on - strand at 920.988 kb on - strand at 920.988 kb on - strand at 920.988 kb on - strand at 920.988 kb on - strand at 920.988 kb on - strand at 921.011 kb on + strand at 921.011 kb on + strand at 921.012 kb on - strand at 921.012 kb on - strand at 921.012 kb on - strand at 921.012 kb on - strand at 921.012 kb on - strand at 921.012 kb on - strand at 921.031 kb on + strand at 921.032 kb on - strand at 921.171 kb on + strand, within OH686_04425 at 921.202 kb on - strand, within OH686_04425 at 921.297 kb on - strand, within OH686_04425 at 921.335 kb on + strand, within OH686_04425 at 921.335 kb on + strand, within OH686_04425 at 921.335 kb on + strand, within OH686_04425 at 921.565 kb on - strand at 921.589 kb on + strand at 921.590 kb on - strand at 921.590 kb on - strand at 921.590 kb on - strand at 921.625 kb on + strand at 921.625 kb on + strand at 921.625 kb on + strand at 921.625 kb on + strand at 921.625 kb on + strand at 921.625 kb on + strand at 921.626 kb on - strand at 921.626 kb on - strand at 921.626 kb on - strand at 921.626 kb on - strand at 921.626 kb on - strand at 921.626 kb on - strand at 921.626 kb on - strand at 921.626 kb on - strand at 921.626 kb on - strand at 921.627 kb on + strand at 921.627 kb on + strand at 921.627 kb on + strand at 921.627 kb on + strand at 921.627 kb on + strand at 921.627 kb on + strand at 921.628 kb on - strand at 921.628 kb on - strand at 921.628 kb on - strand at 921.628 kb on - strand at 921.788 kb on - strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.789 kb on + strand, within OH686_04430 at 921.790 kb on - strand, within OH686_04430 at 921.790 kb on - strand, within OH686_04430 at 921.790 kb on - strand, within OH686_04430 at 921.790 kb on - strand, within OH686_04430 at 921.790 kb on - strand, within OH686_04430 at 921.798 kb on + strand, within OH686_04430 at 921.798 kb on + strand, within OH686_04430 at 921.798 kb on + strand, within OH686_04430 at 921.798 kb on + strand, within OH686_04430 at 921.798 kb on + strand, within OH686_04430 at 921.798 kb on + strand, within OH686_04430 at 921.798 kb on + strand, within OH686_04430 at 921.798 kb on + strand, within OH686_04430 at 921.799 kb on - strand, within OH686_04430 at 921.799 kb on - strand, within OH686_04430 at 921.890 kb on - strand, within OH686_04430
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 920,976 - -0.5 920,976 - -2.5 920,988 - -1.4 920,988 - -0.3 920,988 - +2.1 920,988 - -1.4 920,988 - +0.3 920,988 - -1.2 921,011 + +0.0 921,011 + -2.8 921,012 - +3.1 921,012 - +1.4 921,012 - +1.3 921,012 - +1.8 921,012 - +2.1 921,012 - -1.4 921,031 + -1.2 921,032 - -1.5 921,171 + OH686_04425 0.31 -3.1 921,202 - OH686_04425 0.36 -3.2 921,297 - OH686_04425 0.54 -1.0 921,335 + OH686_04425 0.60 +0.8 921,335 + OH686_04425 0.60 -0.1 921,335 + OH686_04425 0.60 -2.7 921,565 - -0.9 921,589 + -1.2 921,590 - -1.1 921,590 - +0.7 921,590 - +0.6 921,625 + -0.5 921,625 + -0.7 921,625 + -0.6 921,625 + -3.2 921,625 + -2.1 921,625 + -0.0 921,626 - -1.6 921,626 - -2.8 921,626 - -1.6 921,626 - -3.2 921,626 - +0.6 921,626 - +0.8 921,626 - -3.2 921,626 - -1.6 921,626 - +1.0 921,627 + +1.2 921,627 + -3.8 921,627 + -1.5 921,627 + +1.6 921,627 + -0.4 921,627 + -2.0 921,628 - -1.7 921,628 - -1.1 921,628 - -2.6 921,628 - -1.6 921,788 - OH686_04430 0.23 -2.3 921,789 + OH686_04430 0.23 -1.5 921,789 + OH686_04430 0.23 +0.9 921,789 + OH686_04430 0.23 -1.5 921,789 + OH686_04430 0.23 +0.5 921,789 + OH686_04430 0.23 -3.0 921,789 + OH686_04430 0.23 -2.4 921,789 + OH686_04430 0.23 -3.5 921,789 + OH686_04430 0.23 -4.2 921,789 + OH686_04430 0.23 -1.9 921,789 + OH686_04430 0.23 -0.7 921,789 + OH686_04430 0.23 -1.6 921,790 - OH686_04430 0.23 -0.9 921,790 - OH686_04430 0.23 -2.0 921,790 - OH686_04430 0.23 +1.8 921,790 - OH686_04430 0.23 -1.3 921,790 - OH686_04430 0.23 -3.9 921,798 + OH686_04430 0.24 -1.7 921,798 + OH686_04430 0.24 -0.6 921,798 + OH686_04430 0.24 -1.2 921,798 + OH686_04430 0.24 -1.7 921,798 + OH686_04430 0.24 -1.5 921,798 + OH686_04430 0.24 -4.4 921,798 + OH686_04430 0.24 +0.4 921,798 + OH686_04430 0.24 -0.0 921,799 - OH686_04430 0.24 -1.0 921,799 - OH686_04430 0.24 -2.4 921,890 - OH686_04430 0.39 -0.5
Or see this region's nucleotide sequence