Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_03390 and OH686_03395 overlap by 1 nucleotides OH686_03395 and OH686_03400 are separated by 1 nucleotides
OH686_03390: OH686_03390 - Probable RNA methyltransferase, at 700,705 to 701,733
_03390
OH686_03395: OH686_03395 - hypothetical protein, at 701,733 to 702,647
_03395
OH686_03400: OH686_03400 - Serine/threonine protein kinase, at 702,649 to 703,932
_03400
Position (kb) 701
702
703 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 700.761 kb on + strand at 701.413 kb on + strand, within OH686_03390 at 701.414 kb on - strand, within OH686_03390 at 701.444 kb on - strand, within OH686_03390 at 701.521 kb on + strand, within OH686_03390 at 701.521 kb on + strand, within OH686_03390 at 701.521 kb on + strand, within OH686_03390 at 701.522 kb on - strand, within OH686_03390 at 701.522 kb on - strand, within OH686_03390 at 701.545 kb on + strand, within OH686_03390 at 701.545 kb on + strand, within OH686_03390 at 701.545 kb on + strand, within OH686_03390 at 701.546 kb on - strand, within OH686_03390 at 701.570 kb on - strand, within OH686_03390 at 701.570 kb on - strand, within OH686_03390 at 701.611 kb on + strand, within OH686_03390 at 701.611 kb on + strand, within OH686_03390 at 701.611 kb on + strand, within OH686_03390 at 701.612 kb on - strand, within OH686_03390 at 701.612 kb on - strand, within OH686_03390 at 701.642 kb on + strand at 701.642 kb on + strand at 701.642 kb on + strand at 701.642 kb on + strand at 701.643 kb on - strand at 701.643 kb on - strand at 701.666 kb on + strand at 701.666 kb on + strand at 701.666 kb on + strand at 701.666 kb on + strand at 701.666 kb on + strand at 701.666 kb on + strand at 701.666 kb on + strand at 701.666 kb on + strand at 701.667 kb on - strand at 701.667 kb on - strand at 701.667 kb on - strand at 701.667 kb on - strand at 701.667 kb on - strand at 701.667 kb on - strand at 701.737 kb on + strand at 701.737 kb on + strand at 701.738 kb on - strand at 701.738 kb on - strand at 701.738 kb on - strand at 702.142 kb on - strand, within OH686_03395 at 702.328 kb on - strand, within OH686_03395 at 703.445 kb on + strand, within OH686_03400 at 703.445 kb on + strand, within OH686_03400 at 703.445 kb on + strand, within OH686_03400 at 703.445 kb on + strand, within OH686_03400 at 703.446 kb on - strand, within OH686_03400 at 703.446 kb on - strand, within OH686_03400 at 703.446 kb on - strand, within OH686_03400 at 703.446 kb on - strand, within OH686_03400 at 703.446 kb on - strand, within OH686_03400 at 703.446 kb on - strand, within OH686_03400 at 703.446 kb on - strand, within OH686_03400 at 703.446 kb on - strand, within OH686_03400 at 703.446 kb on - strand, within OH686_03400 at 703.561 kb on + strand, within OH686_03400 at 703.561 kb on + strand, within OH686_03400 at 703.561 kb on + strand, within OH686_03400 at 703.562 kb on - strand, within OH686_03400 at 703.562 kb on - strand, within OH686_03400
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 700,761 + -0.1 701,413 + OH686_03390 0.69 -0.1 701,414 - OH686_03390 0.69 -1.6 701,444 - OH686_03390 0.72 -2.1 701,521 + OH686_03390 0.79 -2.1 701,521 + OH686_03390 0.79 -0.3 701,521 + OH686_03390 0.79 -2.6 701,522 - OH686_03390 0.79 -1.3 701,522 - OH686_03390 0.79 -0.7 701,545 + OH686_03390 0.82 -0.2 701,545 + OH686_03390 0.82 +0.3 701,545 + OH686_03390 0.82 -3.1 701,546 - OH686_03390 0.82 +0.1 701,570 - OH686_03390 0.84 +0.3 701,570 - OH686_03390 0.84 -0.0 701,611 + OH686_03390 0.88 +0.9 701,611 + OH686_03390 0.88 +0.7 701,611 + OH686_03390 0.88 -1.9 701,612 - OH686_03390 0.88 +1.1 701,612 - OH686_03390 0.88 -1.6 701,642 + +2.1 701,642 + -3.3 701,642 + -4.1 701,642 + +1.8 701,643 - -2.1 701,643 - -2.9 701,666 + -0.3 701,666 + -2.1 701,666 + +0.5 701,666 + -2.3 701,666 + -0.1 701,666 + +0.2 701,666 + +0.0 701,666 + +1.8 701,667 - +1.4 701,667 - -0.4 701,667 - -3.4 701,667 - +0.7 701,667 - +0.3 701,667 - +0.2 701,737 + -1.1 701,737 + -1.9 701,738 - +0.2 701,738 - -2.9 701,738 - -1.8 702,142 - OH686_03395 0.45 -1.0 702,328 - OH686_03395 0.65 -3.1 703,445 + OH686_03400 0.62 -1.4 703,445 + OH686_03400 0.62 -1.3 703,445 + OH686_03400 0.62 +0.2 703,445 + OH686_03400 0.62 +0.5 703,446 - OH686_03400 0.62 -2.3 703,446 - OH686_03400 0.62 -3.2 703,446 - OH686_03400 0.62 +1.7 703,446 - OH686_03400 0.62 -1.1 703,446 - OH686_03400 0.62 -1.8 703,446 - OH686_03400 0.62 -0.8 703,446 - OH686_03400 0.62 -0.1 703,446 - OH686_03400 0.62 +1.2 703,446 - OH686_03400 0.62 -1.2 703,561 + OH686_03400 0.71 -0.5 703,561 + OH686_03400 0.71 -0.3 703,561 + OH686_03400 0.71 +0.2 703,562 - OH686_03400 0.71 -1.6 703,562 - OH686_03400 0.71 -1.0
Or see this region's nucleotide sequence