Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_01865 and OH686_01870 are separated by 233 nucleotides OH686_01870 and OH686_01875 are separated by 1 nucleotides OH686_01875 and OH686_01880 are separated by 210 nucleotides
OH686_01865: OH686_01865 - MoxR-like , at 398,499 to 399,416
_01865
OH686_01870: OH686_01870 - flavin reductase domain protein FMN-binding protein, at 399,650 to 400,258
_01870
OH686_01875: OH686_01875 - putative lipoprotein, at 400,260 to 400,538
_01875
OH686_01880: OH686_01880 - Bacterial patatin-like phospholipase domain containing protein, at 400,749 to 401,753
_01880
Position (kb) 400
401 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 399.445 kb on + strand at 399.445 kb on + strand at 399.446 kb on - strand at 399.446 kb on - strand at 399.509 kb on + strand at 399.510 kb on - strand at 399.510 kb on - strand at 399.510 kb on - strand at 399.535 kb on + strand at 399.536 kb on - strand at 399.536 kb on - strand at 399.546 kb on + strand at 399.575 kb on + strand at 399.575 kb on + strand at 399.575 kb on + strand at 399.576 kb on - strand at 399.576 kb on - strand at 399.576 kb on - strand at 399.584 kb on + strand at 399.584 kb on + strand at 399.585 kb on - strand at 399.585 kb on - strand at 399.585 kb on - strand at 399.585 kb on - strand at 399.585 kb on - strand at 399.585 kb on - strand at 399.667 kb on + strand at 399.667 kb on + strand at 399.667 kb on + strand at 399.668 kb on - strand at 399.668 kb on - strand at 399.668 kb on - strand at 399.691 kb on + strand at 399.693 kb on + strand at 400.258 kb on + strand at 400.258 kb on + strand at 400.258 kb on + strand at 400.258 kb on + strand at 400.258 kb on + strand at 400.258 kb on + strand at 400.258 kb on + strand at 400.259 kb on - strand at 400.259 kb on - strand at 400.259 kb on - strand at 400.259 kb on - strand at 400.259 kb on - strand at 400.288 kb on + strand, within OH686_01875 at 400.288 kb on + strand, within OH686_01875 at 400.288 kb on + strand, within OH686_01875 at 400.288 kb on + strand, within OH686_01875 at 400.288 kb on + strand, within OH686_01875 at 400.288 kb on + strand, within OH686_01875 at 400.288 kb on + strand, within OH686_01875 at 400.288 kb on + strand, within OH686_01875 at 400.288 kb on + strand, within OH686_01875 at 400.288 kb on + strand, within OH686_01875 at 400.289 kb on - strand, within OH686_01875 at 400.289 kb on - strand, within OH686_01875 at 400.289 kb on - strand, within OH686_01875 at 400.289 kb on - strand, within OH686_01875 at 400.289 kb on - strand, within OH686_01875 at 400.289 kb on - strand, within OH686_01875 at 400.328 kb on - strand, within OH686_01875 at 400.328 kb on - strand, within OH686_01875 at 400.384 kb on + strand, within OH686_01875 at 400.385 kb on - strand, within OH686_01875 at 400.385 kb on - strand, within OH686_01875 at 400.616 kb on + strand at 400.616 kb on + strand at 400.616 kb on + strand at 400.616 kb on + strand at 400.616 kb on + strand at 400.617 kb on - strand at 400.617 kb on - strand at 400.617 kb on - strand at 400.617 kb on - strand at 400.718 kb on + strand at 400.719 kb on - strand at 400.797 kb on + strand at 400.797 kb on + strand at 400.798 kb on - strand at 400.798 kb on - strand at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.893 kb on + strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.894 kb on - strand, within OH686_01880 at 400.944 kb on + strand, within OH686_01880 at 400.944 kb on + strand, within OH686_01880 at 400.944 kb on + strand, within OH686_01880 at 400.945 kb on - strand, within OH686_01880 at 400.945 kb on - strand, within OH686_01880 at 401.029 kb on + strand, within OH686_01880 at 401.030 kb on - strand, within OH686_01880 at 401.030 kb on - strand, within OH686_01880 at 401.068 kb on - strand, within OH686_01880 at 401.068 kb on - strand, within OH686_01880 at 401.304 kb on + strand, within OH686_01880 at 401.304 kb on + strand, within OH686_01880 at 401.304 kb on + strand, within OH686_01880 at 401.304 kb on + strand, within OH686_01880 at 401.304 kb on + strand, within OH686_01880 at 401.305 kb on - strand, within OH686_01880 at 401.305 kb on - strand, within OH686_01880 at 401.305 kb on - strand, within OH686_01880 at 401.305 kb on - strand, within OH686_01880 at 401.305 kb on - strand, within OH686_01880
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 399,445 + +0.0 399,445 + -2.5 399,446 - -0.3 399,446 - +1.3 399,509 + -1.4 399,510 - +0.4 399,510 - +2.5 399,510 - +0.2 399,535 + +0.3 399,536 - +3.3 399,536 - +1.3 399,546 + +1.1 399,575 + -1.1 399,575 + -0.5 399,575 + +0.8 399,576 - -1.2 399,576 - -2.2 399,576 - -1.5 399,584 + +0.2 399,584 + -0.6 399,585 - +0.9 399,585 - +1.9 399,585 - +1.1 399,585 - -2.0 399,585 - +1.8 399,585 - -0.2 399,667 + -2.0 399,667 + +0.6 399,667 + -2.5 399,668 - -1.8 399,668 - +1.3 399,668 - +2.4 399,691 + -0.4 399,693 + -0.1 400,258 + -3.1 400,258 + -1.3 400,258 + +0.1 400,258 + -2.1 400,258 + -0.8 400,258 + +0.4 400,258 + -0.2 400,259 - +0.7 400,259 - +0.9 400,259 - -2.6 400,259 - +0.3 400,259 - -1.3 400,288 + OH686_01875 0.10 -2.0 400,288 + OH686_01875 0.10 +0.4 400,288 + OH686_01875 0.10 +1.0 400,288 + OH686_01875 0.10 -0.6 400,288 + OH686_01875 0.10 +2.7 400,288 + OH686_01875 0.10 -0.3 400,288 + OH686_01875 0.10 -1.5 400,288 + OH686_01875 0.10 +0.3 400,288 + OH686_01875 0.10 -1.6 400,288 + OH686_01875 0.10 -0.2 400,289 - OH686_01875 0.10 -0.5 400,289 - OH686_01875 0.10 +2.0 400,289 - OH686_01875 0.10 +0.9 400,289 - OH686_01875 0.10 -1.5 400,289 - OH686_01875 0.10 -2.2 400,289 - OH686_01875 0.10 +1.1 400,328 - OH686_01875 0.24 -0.7 400,328 - OH686_01875 0.24 -0.2 400,384 + OH686_01875 0.44 -2.0 400,385 - OH686_01875 0.45 -0.1 400,385 - OH686_01875 0.45 +2.5 400,616 + +0.3 400,616 + -0.3 400,616 + +0.1 400,616 + -2.8 400,616 + +0.8 400,617 - +1.8 400,617 - +2.1 400,617 - +0.2 400,617 - +4.2 400,718 + -2.0 400,719 - -2.4 400,797 + +0.6 400,797 + +1.0 400,798 - +2.1 400,798 - +0.0 400,893 + OH686_01880 0.14 -0.5 400,893 + OH686_01880 0.14 +0.6 400,893 + OH686_01880 0.14 -0.3 400,893 + OH686_01880 0.14 +1.1 400,893 + OH686_01880 0.14 -1.0 400,893 + OH686_01880 0.14 +2.6 400,893 + OH686_01880 0.14 -1.4 400,893 + OH686_01880 0.14 +1.2 400,893 + OH686_01880 0.14 -1.9 400,894 - OH686_01880 0.14 +1.2 400,894 - OH686_01880 0.14 -2.0 400,894 - OH686_01880 0.14 +0.5 400,894 - OH686_01880 0.14 -0.1 400,894 - OH686_01880 0.14 +0.8 400,894 - OH686_01880 0.14 -3.7 400,894 - OH686_01880 0.14 -1.4 400,944 + OH686_01880 0.19 +0.3 400,944 + OH686_01880 0.19 -0.1 400,944 + OH686_01880 0.19 -0.1 400,945 - OH686_01880 0.20 -1.1 400,945 - OH686_01880 0.20 +1.8 401,029 + OH686_01880 0.28 -1.6 401,030 - OH686_01880 0.28 -1.6 401,030 - OH686_01880 0.28 -2.5 401,068 - OH686_01880 0.32 +1.0 401,068 - OH686_01880 0.32 +1.0 401,304 + OH686_01880 0.55 +0.9 401,304 + OH686_01880 0.55 -2.9 401,304 + OH686_01880 0.55 -1.1 401,304 + OH686_01880 0.55 -0.5 401,304 + OH686_01880 0.55 +0.6 401,305 - OH686_01880 0.55 +0.7 401,305 - OH686_01880 0.55 -0.4 401,305 - OH686_01880 0.55 +0.4 401,305 - OH686_01880 0.55 +0.6 401,305 - OH686_01880 0.55 +1.5
Or see this region's nucleotide sequence