Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_01695 and OH686_01700 are separated by 283 nucleotides OH686_01700 and OH686_01705 are separated by 5 nucleotides OH686_01705 and OH686_01710 are separated by 4 nucleotides
OH686_01695: OH686_01695 - Propionate catabolism operon transcriptional regulator of GntR family, at 367,009 to 367,731
_01695
OH686_01700: OH686_01700 - hypothetical protein, at 368,015 to 368,551
_01700
OH686_01705: OH686_01705 - hypothetical protein, at 368,557 to 370,083
_01705
OH686_01710: OH686_01710 - Alpha-L-glutamate ligase family protein, at 370,088 to 371,074
_01710
Position (kb) 368
369
370
371 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 367.583 kb on + strand, within OH686_01695 at 367.583 kb on + strand, within OH686_01695 at 367.583 kb on + strand, within OH686_01695 at 367.584 kb on - strand, within OH686_01695 at 367.584 kb on - strand, within OH686_01695 at 367.584 kb on - strand, within OH686_01695 at 367.584 kb on - strand, within OH686_01695 at 367.584 kb on - strand, within OH686_01695 at 367.732 kb on + strand at 367.784 kb on + strand at 367.784 kb on + strand at 367.874 kb on + strand at 367.874 kb on + strand at 367.875 kb on - strand at 367.906 kb on + strand at 367.906 kb on + strand at 367.907 kb on - strand at 367.907 kb on - strand at 367.907 kb on - strand at 367.907 kb on - strand at 367.943 kb on + strand at 367.943 kb on + strand at 367.943 kb on + strand at 367.943 kb on + strand at 367.943 kb on + strand at 367.944 kb on - strand at 367.944 kb on - strand at 367.952 kb on + strand at 367.953 kb on - strand at 367.953 kb on - strand at 367.953 kb on - strand at 368.014 kb on + strand at 368.014 kb on + strand at 368.014 kb on + strand at 368.014 kb on + strand at 368.014 kb on + strand at 368.014 kb on + strand at 368.015 kb on - strand at 368.015 kb on - strand at 368.015 kb on - strand at 368.015 kb on - strand at 368.015 kb on - strand at 368.015 kb on - strand at 368.015 kb on - strand at 368.015 kb on - strand at 368.015 kb on - strand at 368.015 kb on - strand at 368.015 kb on - strand at 368.093 kb on + strand, within OH686_01700 at 368.093 kb on - strand, within OH686_01700 at 368.094 kb on - strand, within OH686_01700 at 368.108 kb on + strand, within OH686_01700 at 368.108 kb on + strand, within OH686_01700 at 368.108 kb on + strand, within OH686_01700 at 368.109 kb on - strand, within OH686_01700 at 368.235 kb on - strand, within OH686_01700 at 368.235 kb on - strand, within OH686_01700 at 368.235 kb on - strand, within OH686_01700 at 368.343 kb on - strand, within OH686_01700 at 368.343 kb on - strand, within OH686_01700 at 368.343 kb on - strand, within OH686_01700 at 368.343 kb on - strand, within OH686_01700 at 368.343 kb on - strand, within OH686_01700 at 368.343 kb on - strand, within OH686_01700 at 368.497 kb on + strand, within OH686_01700 at 368.497 kb on + strand, within OH686_01700 at 368.498 kb on - strand at 368.498 kb on - strand at 368.498 kb on - strand at 368.498 kb on - strand at 368.498 kb on - strand at 368.498 kb on - strand at 368.498 kb on - strand at 368.498 kb on - strand at 368.498 kb on - strand at 368.498 kb on - strand at 368.501 kb on + strand at 368.502 kb on - strand at 368.502 kb on - strand at 368.502 kb on - strand at 368.502 kb on - strand at 368.502 kb on - strand at 368.502 kb on - strand at 368.502 kb on - strand at 368.502 kb on - strand at 368.525 kb on - strand at 368.568 kb on + strand at 368.568 kb on + strand at 368.568 kb on + strand at 368.568 kb on + strand at 368.590 kb on - strand at 368.629 kb on + strand at 368.629 kb on + strand at 368.630 kb on - strand at 368.770 kb on + strand, within OH686_01705 at 368.770 kb on + strand, within OH686_01705 at 368.770 kb on + strand, within OH686_01705 at 368.770 kb on + strand, within OH686_01705 at 368.770 kb on + strand, within OH686_01705 at 368.770 kb on + strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.771 kb on - strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.774 kb on + strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.775 kb on - strand, within OH686_01705 at 368.807 kb on - strand, within OH686_01705 at 368.807 kb on - strand, within OH686_01705 at 368.807 kb on - strand, within OH686_01705 at 368.807 kb on - strand, within OH686_01705 at 368.807 kb on - strand, within OH686_01705 at 368.841 kb on + strand, within OH686_01705 at 368.841 kb on + strand, within OH686_01705 at 368.841 kb on + strand, within OH686_01705 at 368.841 kb on + strand, within OH686_01705 at 368.842 kb on - strand, within OH686_01705 at 368.842 kb on - strand, within OH686_01705 at 368.887 kb on + strand, within OH686_01705 at 368.887 kb on + strand, within OH686_01705 at 368.888 kb on - strand, within OH686_01705 at 368.888 kb on - strand, within OH686_01705 at 368.888 kb on - strand, within OH686_01705 at 368.888 kb on - strand, within OH686_01705 at 368.888 kb on - strand, within OH686_01705 at 368.890 kb on + strand, within OH686_01705 at 368.891 kb on - strand, within OH686_01705 at 368.914 kb on + strand, within OH686_01705 at 369.265 kb on + strand, within OH686_01705 at 369.265 kb on + strand, within OH686_01705 at 369.265 kb on + strand, within OH686_01705 at 369.266 kb on - strand, within OH686_01705 at 369.457 kb on + strand, within OH686_01705 at 369.458 kb on - strand, within OH686_01705 at 369.466 kb on + strand, within OH686_01705 at 369.467 kb on - strand, within OH686_01705 at 369.496 kb on + strand, within OH686_01705 at 369.496 kb on + strand, within OH686_01705 at 369.496 kb on + strand, within OH686_01705 at 369.496 kb on + strand, within OH686_01705 at 369.496 kb on + strand, within OH686_01705 at 369.497 kb on - strand, within OH686_01705 at 369.497 kb on - strand, within OH686_01705 at 369.497 kb on - strand, within OH686_01705 at 369.682 kb on + strand, within OH686_01705 at 369.682 kb on + strand, within OH686_01705 at 369.683 kb on - strand, within OH686_01705 at 369.710 kb on + strand, within OH686_01705 at 369.710 kb on + strand, within OH686_01705 at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.961 kb on + strand at 369.962 kb on - strand at 369.962 kb on - strand at 369.962 kb on - strand at 369.962 kb on - strand at 370.163 kb on + strand at 370.164 kb on - strand at 370.164 kb on - strand at 370.164 kb on - strand at 370.164 kb on - strand at 370.164 kb on - strand at 370.175 kb on + strand at 370.175 kb on + strand at 370.175 kb on + strand at 370.176 kb on - strand at 370.203 kb on + strand, within OH686_01710 at 370.203 kb on + strand, within OH686_01710 at 370.203 kb on + strand, within OH686_01710 at 370.203 kb on + strand, within OH686_01710 at 370.204 kb on - strand, within OH686_01710 at 370.204 kb on - strand, within OH686_01710 at 370.266 kb on - strand, within OH686_01710 at 370.403 kb on + strand, within OH686_01710 at 370.403 kb on + strand, within OH686_01710 at 370.403 kb on + strand, within OH686_01710 at 370.403 kb on + strand, within OH686_01710 at 370.403 kb on + strand, within OH686_01710 at 370.403 kb on + strand, within OH686_01710 at 370.404 kb on - strand, within OH686_01710 at 370.404 kb on - strand, within OH686_01710 at 370.404 kb on - strand, within OH686_01710 at 370.404 kb on - strand, within OH686_01710 at 370.404 kb on - strand, within OH686_01710 at 370.478 kb on + strand, within OH686_01710 at 370.478 kb on + strand, within OH686_01710 at 370.478 kb on + strand, within OH686_01710 at 370.479 kb on - strand, within OH686_01710 at 370.479 kb on - strand, within OH686_01710 at 370.479 kb on - strand, within OH686_01710 at 370.479 kb on - strand, within OH686_01710 at 370.556 kb on + strand, within OH686_01710 at 370.556 kb on + strand, within OH686_01710 at 370.556 kb on + strand, within OH686_01710 at 370.556 kb on + strand, within OH686_01710 at 370.556 kb on + strand, within OH686_01710 at 370.557 kb on - strand, within OH686_01710 at 370.557 kb on - strand, within OH686_01710 at 370.557 kb on - strand, within OH686_01710 at 370.557 kb on - strand, within OH686_01710 at 370.820 kb on + strand, within OH686_01710 at 370.820 kb on + strand, within OH686_01710 at 370.820 kb on + strand, within OH686_01710 at 370.821 kb on - strand, within OH686_01710 at 370.821 kb on - strand, within OH686_01710 at 370.841 kb on + strand, within OH686_01710
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 367,583 + OH686_01695 0.79 -3.0 367,583 + OH686_01695 0.79 -0.3 367,583 + OH686_01695 0.79 -0.7 367,584 - OH686_01695 0.80 -1.3 367,584 - OH686_01695 0.80 -0.3 367,584 - OH686_01695 0.80 +0.7 367,584 - OH686_01695 0.80 +1.3 367,584 - OH686_01695 0.80 -1.7 367,732 + +1.5 367,784 + +0.1 367,784 + -3.6 367,874 + -0.6 367,874 + +0.0 367,875 - +1.2 367,906 + -0.2 367,906 + -2.7 367,907 - +0.3 367,907 - +1.3 367,907 - -3.2 367,907 - +0.5 367,943 + -1.7 367,943 + -1.6 367,943 + +0.1 367,943 + -2.7 367,943 + -0.7 367,944 - -1.8 367,944 - -3.0 367,952 + -1.7 367,953 - -0.7 367,953 - -2.0 367,953 - +0.4 368,014 + -0.9 368,014 + -1.3 368,014 + +0.5 368,014 + -1.8 368,014 + -1.9 368,014 + +0.3 368,015 - -1.0 368,015 - -2.7 368,015 - -1.0 368,015 - -1.6 368,015 - -3.7 368,015 - -0.9 368,015 - +0.3 368,015 - +0.0 368,015 - -0.0 368,015 - -2.1 368,015 - -1.0 368,093 + OH686_01700 0.15 +0.3 368,093 - OH686_01700 0.15 -2.7 368,094 - OH686_01700 0.15 +0.5 368,108 + OH686_01700 0.17 +1.0 368,108 + OH686_01700 0.17 -0.7 368,108 + OH686_01700 0.17 +0.3 368,109 - OH686_01700 0.18 -2.1 368,235 - OH686_01700 0.41 -2.2 368,235 - OH686_01700 0.41 -2.4 368,235 - OH686_01700 0.41 -0.3 368,343 - OH686_01700 0.61 -3.3 368,343 - OH686_01700 0.61 -0.7 368,343 - OH686_01700 0.61 -1.6 368,343 - OH686_01700 0.61 -1.6 368,343 - OH686_01700 0.61 -0.0 368,343 - OH686_01700 0.61 -2.6 368,497 + OH686_01700 0.90 -0.5 368,497 + OH686_01700 0.90 -0.5 368,498 - -2.1 368,498 - -2.2 368,498 - -1.7 368,498 - -0.4 368,498 - -2.0 368,498 - -1.6 368,498 - -3.1 368,498 - -1.5 368,498 - -0.5 368,498 - -3.1 368,501 + +2.2 368,502 - -2.4 368,502 - -0.0 368,502 - +0.3 368,502 - -1.9 368,502 - -3.0 368,502 - -4.2 368,502 - -2.1 368,502 - -2.6 368,525 - -0.7 368,568 + -2.7 368,568 + -2.1 368,568 + -1.8 368,568 + -1.3 368,590 - -1.0 368,629 + -2.4 368,629 + -0.5 368,630 - -2.3 368,770 + OH686_01705 0.14 -1.7 368,770 + OH686_01705 0.14 -2.5 368,770 + OH686_01705 0.14 -2.6 368,770 + OH686_01705 0.14 -1.7 368,770 + OH686_01705 0.14 -0.8 368,770 + OH686_01705 0.14 -3.2 368,771 - OH686_01705 0.14 -3.2 368,771 - OH686_01705 0.14 -0.9 368,771 - OH686_01705 0.14 -1.9 368,771 - OH686_01705 0.14 -2.1 368,771 - OH686_01705 0.14 -2.6 368,771 - OH686_01705 0.14 -3.2 368,771 - OH686_01705 0.14 +0.1 368,771 - OH686_01705 0.14 -0.3 368,771 - OH686_01705 0.14 -3.5 368,771 - OH686_01705 0.14 -3.1 368,771 - OH686_01705 0.14 -1.7 368,771 - OH686_01705 0.14 -4.2 368,771 - OH686_01705 0.14 -2.0 368,771 - OH686_01705 0.14 -1.3 368,771 - OH686_01705 0.14 -2.9 368,771 - OH686_01705 0.14 -2.0 368,774 + OH686_01705 0.14 -2.0 368,774 + OH686_01705 0.14 -1.3 368,774 + OH686_01705 0.14 -2.6 368,774 + OH686_01705 0.14 -3.6 368,774 + OH686_01705 0.14 -0.0 368,774 + OH686_01705 0.14 -4.2 368,774 + OH686_01705 0.14 -1.9 368,774 + OH686_01705 0.14 -2.8 368,774 + OH686_01705 0.14 -1.6 368,774 + OH686_01705 0.14 -3.2 368,774 + OH686_01705 0.14 -2.7 368,774 + OH686_01705 0.14 -1.3 368,774 + OH686_01705 0.14 -2.2 368,774 + OH686_01705 0.14 -2.0 368,774 + OH686_01705 0.14 -2.2 368,774 + OH686_01705 0.14 -1.7 368,774 + OH686_01705 0.14 -1.6 368,774 + OH686_01705 0.14 -1.4 368,774 + OH686_01705 0.14 -2.5 368,774 + OH686_01705 0.14 -0.9 368,774 + OH686_01705 0.14 -2.0 368,774 + OH686_01705 0.14 -1.1 368,774 + OH686_01705 0.14 -3.0 368,775 - OH686_01705 0.14 -1.0 368,775 - OH686_01705 0.14 -2.2 368,775 - OH686_01705 0.14 -1.9 368,775 - OH686_01705 0.14 -0.9 368,775 - OH686_01705 0.14 -0.5 368,775 - OH686_01705 0.14 -3.1 368,775 - OH686_01705 0.14 +0.3 368,775 - OH686_01705 0.14 -1.6 368,775 - OH686_01705 0.14 -3.9 368,775 - OH686_01705 0.14 -0.9 368,775 - OH686_01705 0.14 -3.2 368,775 - OH686_01705 0.14 +0.3 368,775 - OH686_01705 0.14 -0.9 368,775 - OH686_01705 0.14 -1.0 368,775 - OH686_01705 0.14 -1.5 368,775 - OH686_01705 0.14 -0.9 368,775 - OH686_01705 0.14 -0.5 368,775 - OH686_01705 0.14 -2.4 368,775 - OH686_01705 0.14 -2.1 368,775 - OH686_01705 0.14 -3.1 368,775 - OH686_01705 0.14 -1.1 368,775 - OH686_01705 0.14 -0.5 368,775 - OH686_01705 0.14 -1.5 368,807 - OH686_01705 0.16 -3.2 368,807 - OH686_01705 0.16 -0.4 368,807 - OH686_01705 0.16 -2.5 368,807 - OH686_01705 0.16 -3.5 368,807 - OH686_01705 0.16 -0.6 368,841 + OH686_01705 0.19 -2.0 368,841 + OH686_01705 0.19 -2.6 368,841 + OH686_01705 0.19 -3.0 368,841 + OH686_01705 0.19 -2.3 368,842 - OH686_01705 0.19 -2.1 368,842 - OH686_01705 0.19 -1.5 368,887 + OH686_01705 0.22 -0.9 368,887 + OH686_01705 0.22 -1.7 368,888 - OH686_01705 0.22 -2.4 368,888 - OH686_01705 0.22 -2.0 368,888 - OH686_01705 0.22 -1.0 368,888 - OH686_01705 0.22 -2.2 368,888 - OH686_01705 0.22 -0.7 368,890 + OH686_01705 0.22 -2.1 368,891 - OH686_01705 0.22 -1.9 368,914 + OH686_01705 0.23 -1.9 369,265 + OH686_01705 0.46 -0.9 369,265 + OH686_01705 0.46 -0.2 369,265 + OH686_01705 0.46 -1.9 369,266 - OH686_01705 0.46 -0.9 369,457 + OH686_01705 0.59 -0.3 369,458 - OH686_01705 0.59 +0.8 369,466 + OH686_01705 0.60 -2.3 369,467 - OH686_01705 0.60 -1.0 369,496 + OH686_01705 0.61 -3.1 369,496 + OH686_01705 0.61 -1.7 369,496 + OH686_01705 0.61 -1.0 369,496 + OH686_01705 0.61 -0.3 369,496 + OH686_01705 0.61 -1.3 369,497 - OH686_01705 0.62 -0.0 369,497 - OH686_01705 0.62 -1.6 369,497 - OH686_01705 0.62 -0.3 369,682 + OH686_01705 0.74 -3.0 369,682 + OH686_01705 0.74 -2.5 369,683 - OH686_01705 0.74 -2.6 369,710 + OH686_01705 0.76 -2.4 369,710 + OH686_01705 0.76 +0.2 369,961 + -1.9 369,961 + -0.0 369,961 + -3.8 369,961 + -2.2 369,961 + -2.9 369,961 + +0.5 369,961 + -0.3 369,961 + -1.0 369,961 + -2.9 369,961 + -1.3 369,961 + -1.3 369,961 + +0.5 369,961 + -0.9 369,961 + -1.0 369,962 - -0.6 369,962 - -0.9 369,962 - +0.4 369,962 - -2.2 370,163 + -2.5 370,164 - +0.3 370,164 - -1.6 370,164 - +0.7 370,164 - -0.2 370,164 - -2.9 370,175 + -0.4 370,175 + -0.8 370,175 + -0.5 370,176 - -0.7 370,203 + OH686_01710 0.12 -0.0 370,203 + OH686_01710 0.12 -0.0 370,203 + OH686_01710 0.12 -2.0 370,203 + OH686_01710 0.12 -1.5 370,204 - OH686_01710 0.12 -1.4 370,204 - OH686_01710 0.12 -1.9 370,266 - OH686_01710 0.18 -2.4 370,403 + OH686_01710 0.32 -1.0 370,403 + OH686_01710 0.32 -1.8 370,403 + OH686_01710 0.32 -1.0 370,403 + OH686_01710 0.32 -3.2 370,403 + OH686_01710 0.32 -1.8 370,403 + OH686_01710 0.32 -2.0 370,404 - OH686_01710 0.32 -3.5 370,404 - OH686_01710 0.32 -2.8 370,404 - OH686_01710 0.32 -1.9 370,404 - OH686_01710 0.32 -1.8 370,404 - OH686_01710 0.32 -2.9 370,478 + OH686_01710 0.40 -0.6 370,478 + OH686_01710 0.40 -1.0 370,478 + OH686_01710 0.40 -2.5 370,479 - OH686_01710 0.40 -1.5 370,479 - OH686_01710 0.40 -2.2 370,479 - OH686_01710 0.40 -3.1 370,479 - OH686_01710 0.40 -0.9 370,556 + OH686_01710 0.47 -0.8 370,556 + OH686_01710 0.47 +0.1 370,556 + OH686_01710 0.47 -0.5 370,556 + OH686_01710 0.47 -1.5 370,556 + OH686_01710 0.47 +0.3 370,557 - OH686_01710 0.48 -1.8 370,557 - OH686_01710 0.48 -2.4 370,557 - OH686_01710 0.48 -1.0 370,557 - OH686_01710 0.48 -3.2 370,820 + OH686_01710 0.74 -0.5 370,820 + OH686_01710 0.74 -1.3 370,820 + OH686_01710 0.74 +1.3 370,821 - OH686_01710 0.74 -2.8 370,821 - OH686_01710 0.74 -3.6 370,841 + OH686_01710 0.76 -0.7
Or see this region's nucleotide sequence