Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_00655 and OH686_00660 are separated by 77 nucleotides OH686_00660 and OH686_00665 are separated by 192 nucleotides OH686_00665 and OH686_00670 are separated by 138 nucleotides
OH686_00655: OH686_00655 - hypothetical protein, at 130,231 to 130,560
_00655
OH686_00660: OH686_00660 - Isochorismatase , at 130,638 to 131,231
_00660
OH686_00665: OH686_00665 - protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific, at 131,424 to 132,338
_00665
OH686_00670: OH686_00670 - hypothetical protein, at 132,477 to 133,289
_00670
Position (kb) 131
132
133 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 130.578 kb on + strand at 130.587 kb on + strand at 130.587 kb on + strand at 130.587 kb on + strand at 130.587 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.675 kb on + strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.676 kb on - strand at 130.795 kb on + strand, within OH686_00660 at 130.795 kb on + strand, within OH686_00660 at 130.795 kb on + strand, within OH686_00660 at 130.795 kb on + strand, within OH686_00660 at 130.795 kb on + strand, within OH686_00660 at 130.795 kb on + strand, within OH686_00660 at 130.795 kb on + strand, within OH686_00660 at 130.795 kb on + strand, within OH686_00660 at 130.795 kb on + strand, within OH686_00660 at 130.796 kb on - strand, within OH686_00660 at 130.796 kb on - strand, within OH686_00660 at 130.796 kb on - strand, within OH686_00660 at 130.796 kb on - strand, within OH686_00660 at 130.796 kb on - strand, within OH686_00660 at 130.796 kb on - strand, within OH686_00660 at 130.820 kb on + strand, within OH686_00660 at 130.820 kb on + strand, within OH686_00660 at 130.821 kb on - strand, within OH686_00660 at 131.132 kb on - strand, within OH686_00660 at 131.132 kb on - strand, within OH686_00660 at 131.132 kb on - strand, within OH686_00660 at 131.189 kb on - strand at 131.260 kb on + strand at 131.260 kb on + strand at 131.260 kb on + strand at 131.260 kb on + strand at 131.260 kb on + strand at 131.261 kb on - strand at 131.261 kb on - strand at 131.261 kb on - strand at 131.261 kb on - strand at 131.294 kb on + strand at 131.294 kb on + strand at 131.294 kb on + strand at 131.295 kb on - strand at 131.295 kb on - strand at 131.295 kb on - strand at 131.295 kb on - strand at 131.391 kb on + strand at 131.392 kb on - strand at 131.392 kb on - strand at 131.392 kb on - strand at 131.585 kb on + strand, within OH686_00665 at 131.585 kb on + strand, within OH686_00665 at 131.586 kb on - strand, within OH686_00665 at 131.586 kb on - strand, within OH686_00665 at 131.589 kb on + strand, within OH686_00665 at 131.589 kb on + strand, within OH686_00665 at 131.589 kb on + strand, within OH686_00665 at 131.589 kb on + strand, within OH686_00665 at 131.589 kb on + strand, within OH686_00665 at 131.589 kb on + strand, within OH686_00665 at 131.589 kb on + strand, within OH686_00665 at 131.589 kb on + strand, within OH686_00665 at 131.590 kb on - strand, within OH686_00665 at 131.590 kb on - strand, within OH686_00665 at 131.590 kb on - strand, within OH686_00665 at 131.590 kb on - strand, within OH686_00665 at 131.590 kb on - strand, within OH686_00665 at 131.590 kb on - strand, within OH686_00665 at 131.590 kb on - strand, within OH686_00665 at 131.665 kb on + strand, within OH686_00665 at 131.665 kb on + strand, within OH686_00665 at 131.665 kb on + strand, within OH686_00665 at 131.665 kb on + strand, within OH686_00665 at 131.666 kb on - strand, within OH686_00665 at 131.676 kb on + strand, within OH686_00665 at 131.677 kb on - strand, within OH686_00665 at 131.677 kb on - strand, within OH686_00665 at 131.717 kb on - strand, within OH686_00665 at 131.857 kb on - strand, within OH686_00665 at 131.857 kb on - strand, within OH686_00665 at 131.928 kb on - strand, within OH686_00665 at 131.958 kb on + strand, within OH686_00665 at 131.959 kb on - strand, within OH686_00665 at 131.959 kb on - strand, within OH686_00665 at 131.959 kb on - strand, within OH686_00665 at 131.959 kb on - strand, within OH686_00665 at 131.959 kb on - strand, within OH686_00665 at 132.030 kb on + strand, within OH686_00665 at 132.031 kb on - strand, within OH686_00665 at 132.031 kb on - strand, within OH686_00665 at 132.031 kb on - strand, within OH686_00665 at 132.031 kb on - strand, within OH686_00665 at 132.056 kb on + strand, within OH686_00665 at 132.069 kb on + strand, within OH686_00665 at 132.069 kb on + strand, within OH686_00665 at 132.069 kb on + strand, within OH686_00665 at 132.179 kb on - strand, within OH686_00665 at 132.303 kb on + strand at 132.303 kb on + strand at 132.342 kb on + strand at 132.342 kb on + strand at 132.362 kb on + strand at 132.362 kb on + strand at 132.362 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.366 kb on + strand at 132.367 kb on - strand at 132.367 kb on - strand at 132.367 kb on - strand at 132.367 kb on - strand at 132.367 kb on - strand at 132.367 kb on - strand at 132.367 kb on - strand at 132.370 kb on + strand at 132.370 kb on + strand at 132.371 kb on - strand at 132.411 kb on + strand at 132.411 kb on + strand at 132.412 kb on - strand at 132.412 kb on - strand at 132.734 kb on - strand, within OH686_00670 at 132.734 kb on - strand, within OH686_00670 at 132.734 kb on - strand, within OH686_00670 at 132.763 kb on + strand, within OH686_00670 at 132.763 kb on + strand, within OH686_00670 at 132.763 kb on + strand, within OH686_00670 at 132.763 kb on + strand, within OH686_00670 at 132.764 kb on - strand, within OH686_00670 at 132.764 kb on - strand, within OH686_00670 at 132.764 kb on - strand, within OH686_00670 at 132.764 kb on - strand, within OH686_00670 at 132.764 kb on - strand, within OH686_00670 at 132.764 kb on - strand, within OH686_00670 at 132.865 kb on + strand, within OH686_00670 at 132.865 kb on + strand, within OH686_00670 at 132.865 kb on + strand, within OH686_00670 at 132.865 kb on + strand, within OH686_00670 at 132.865 kb on + strand, within OH686_00670 at 132.865 kb on + strand, within OH686_00670 at 132.865 kb on + strand, within OH686_00670 at 132.865 kb on + strand, within OH686_00670 at 132.865 kb on + strand, within OH686_00670 at 132.866 kb on - strand, within OH686_00670 at 132.866 kb on - strand, within OH686_00670 at 132.866 kb on - strand, within OH686_00670 at 132.866 kb on - strand, within OH686_00670 at 133.044 kb on - strand, within OH686_00670 at 133.044 kb on - strand, within OH686_00670 at 133.059 kb on + strand, within OH686_00670 at 133.059 kb on + strand, within OH686_00670 at 133.059 kb on + strand, within OH686_00670 at 133.059 kb on + strand, within OH686_00670 at 133.059 kb on + strand, within OH686_00670 at 133.059 kb on + strand, within OH686_00670 at 133.060 kb on - strand, within OH686_00670 at 133.060 kb on - strand, within OH686_00670 at 133.060 kb on - strand, within OH686_00670 at 133.079 kb on + strand, within OH686_00670 at 133.079 kb on + strand, within OH686_00670 at 133.079 kb on + strand, within OH686_00670 at 133.080 kb on - strand, within OH686_00670 at 133.251 kb on - strand at 133.281 kb on + strand at 133.281 kb on + strand at 133.282 kb on - strand at 133.282 kb on - strand at 133.282 kb on - strand at 133.282 kb on - strand at 133.282 kb on - strand at 133.282 kb on - strand at 133.290 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 130,578 + -1.0 130,587 + -2.3 130,587 + -1.5 130,587 + +1.1 130,587 + -2.6 130,675 + -1.0 130,675 + -1.0 130,675 + +3.3 130,675 + +0.5 130,675 + -1.7 130,675 + +0.0 130,675 + -0.1 130,675 + -3.9 130,675 + -2.3 130,675 + -3.2 130,675 + +0.3 130,675 + -0.8 130,675 + +0.1 130,675 + -1.8 130,675 + -0.2 130,675 + +0.3 130,675 + +0.6 130,675 + -3.1 130,675 + -2.6 130,675 + +0.2 130,675 + +1.1 130,675 + +0.8 130,675 + +2.0 130,675 + -2.6 130,675 + +1.2 130,675 + -4.0 130,675 + +1.2 130,676 - -2.2 130,676 - -0.6 130,676 - -0.4 130,676 - -0.2 130,676 - -1.2 130,676 - -3.0 130,676 - -2.1 130,676 - -1.7 130,676 - -1.1 130,676 - -0.5 130,676 - -1.8 130,676 - -0.3 130,676 - +1.2 130,676 - -1.4 130,676 - -1.2 130,676 - +0.3 130,676 - -1.0 130,676 - -0.5 130,676 - -2.2 130,795 + OH686_00660 0.26 +1.4 130,795 + OH686_00660 0.26 -2.2 130,795 + OH686_00660 0.26 -0.8 130,795 + OH686_00660 0.26 +0.0 130,795 + OH686_00660 0.26 -0.4 130,795 + OH686_00660 0.26 +0.3 130,795 + OH686_00660 0.26 -0.7 130,795 + OH686_00660 0.26 +0.1 130,795 + OH686_00660 0.26 +0.8 130,796 - OH686_00660 0.27 -0.8 130,796 - OH686_00660 0.27 -1.9 130,796 - OH686_00660 0.27 -2.1 130,796 - OH686_00660 0.27 -1.3 130,796 - OH686_00660 0.27 -1.0 130,796 - OH686_00660 0.27 -1.8 130,820 + OH686_00660 0.31 -1.6 130,820 + OH686_00660 0.31 +0.4 130,821 - OH686_00660 0.31 +1.1 131,132 - OH686_00660 0.83 -1.5 131,132 - OH686_00660 0.83 -2.3 131,132 - OH686_00660 0.83 +1.2 131,189 - -0.3 131,260 + +0.8 131,260 + +0.6 131,260 + -2.0 131,260 + +2.1 131,260 + -1.8 131,261 - -1.4 131,261 - -0.7 131,261 - -2.3 131,261 - +1.5 131,294 + +0.6 131,294 + +0.6 131,294 + -0.3 131,295 - -0.7 131,295 - +0.5 131,295 - +0.5 131,295 - -1.8 131,391 + -0.2 131,392 - -2.8 131,392 - -1.5 131,392 - -0.2 131,585 + OH686_00665 0.18 -1.1 131,585 + OH686_00665 0.18 -2.8 131,586 - OH686_00665 0.18 -2.0 131,586 - OH686_00665 0.18 -1.6 131,589 + OH686_00665 0.18 -3.6 131,589 + OH686_00665 0.18 -1.6 131,589 + OH686_00665 0.18 -2.3 131,589 + OH686_00665 0.18 -2.1 131,589 + OH686_00665 0.18 -2.8 131,589 + OH686_00665 0.18 +0.0 131,589 + OH686_00665 0.18 -1.9 131,589 + OH686_00665 0.18 -1.8 131,590 - OH686_00665 0.18 -3.9 131,590 - OH686_00665 0.18 -0.8 131,590 - OH686_00665 0.18 -3.9 131,590 - OH686_00665 0.18 -0.0 131,590 - OH686_00665 0.18 -1.0 131,590 - OH686_00665 0.18 +1.1 131,590 - OH686_00665 0.18 -1.8 131,665 + OH686_00665 0.26 -3.0 131,665 + OH686_00665 0.26 -2.8 131,665 + OH686_00665 0.26 -2.0 131,665 + OH686_00665 0.26 -1.7 131,666 - OH686_00665 0.26 -1.9 131,676 + OH686_00665 0.28 -3.8 131,677 - OH686_00665 0.28 -2.2 131,677 - OH686_00665 0.28 -3.4 131,717 - OH686_00665 0.32 -2.6 131,857 - OH686_00665 0.47 -2.2 131,857 - OH686_00665 0.47 -1.9 131,928 - OH686_00665 0.55 -1.6 131,958 + OH686_00665 0.58 -2.4 131,959 - OH686_00665 0.58 -0.9 131,959 - OH686_00665 0.58 -3.3 131,959 - OH686_00665 0.58 -2.4 131,959 - OH686_00665 0.58 -0.3 131,959 - OH686_00665 0.58 -2.1 132,030 + OH686_00665 0.66 -2.7 132,031 - OH686_00665 0.66 -2.1 132,031 - OH686_00665 0.66 -3.1 132,031 - OH686_00665 0.66 -2.5 132,031 - OH686_00665 0.66 -2.5 132,056 + OH686_00665 0.69 -3.4 132,069 + OH686_00665 0.70 -2.3 132,069 + OH686_00665 0.70 -0.8 132,069 + OH686_00665 0.70 -2.9 132,179 - OH686_00665 0.83 -2.0 132,303 + -2.0 132,303 + -0.4 132,342 + -2.6 132,342 + +0.6 132,362 + +0.9 132,362 + -0.1 132,362 + -3.1 132,366 + +1.0 132,366 + -2.4 132,366 + -1.7 132,366 + +0.6 132,366 + -2.4 132,366 + -2.3 132,366 + -1.3 132,366 + -3.7 132,366 + -0.8 132,366 + -2.4 132,366 + -0.4 132,366 + -0.4 132,367 - -2.6 132,367 - -1.6 132,367 - -3.6 132,367 - -1.5 132,367 - -1.4 132,367 - -1.8 132,367 - -1.9 132,370 + -1.1 132,370 + -1.8 132,371 - -1.5 132,411 + -0.5 132,411 + -0.4 132,412 - -3.9 132,412 - +0.6 132,734 - OH686_00670 0.32 +0.8 132,734 - OH686_00670 0.32 +1.7 132,734 - OH686_00670 0.32 -0.3 132,763 + OH686_00670 0.35 -1.4 132,763 + OH686_00670 0.35 -4.1 132,763 + OH686_00670 0.35 -2.4 132,763 + OH686_00670 0.35 -0.1 132,764 - OH686_00670 0.35 -2.3 132,764 - OH686_00670 0.35 +0.1 132,764 - OH686_00670 0.35 -2.3 132,764 - OH686_00670 0.35 -0.6 132,764 - OH686_00670 0.35 -1.0 132,764 - OH686_00670 0.35 -2.0 132,865 + OH686_00670 0.48 -1.0 132,865 + OH686_00670 0.48 -2.1 132,865 + OH686_00670 0.48 -1.6 132,865 + OH686_00670 0.48 -0.6 132,865 + OH686_00670 0.48 +1.3 132,865 + OH686_00670 0.48 -0.4 132,865 + OH686_00670 0.48 +3.5 132,865 + OH686_00670 0.48 -0.6 132,865 + OH686_00670 0.48 -2.3 132,866 - OH686_00670 0.48 -2.1 132,866 - OH686_00670 0.48 +0.3 132,866 - OH686_00670 0.48 -1.0 132,866 - OH686_00670 0.48 -0.9 133,044 - OH686_00670 0.70 -0.7 133,044 - OH686_00670 0.70 +1.0 133,059 + OH686_00670 0.72 -0.2 133,059 + OH686_00670 0.72 -2.7 133,059 + OH686_00670 0.72 +0.1 133,059 + OH686_00670 0.72 -1.6 133,059 + OH686_00670 0.72 -0.4 133,059 + OH686_00670 0.72 +0.4 133,060 - OH686_00670 0.72 -2.7 133,060 - OH686_00670 0.72 +0.4 133,060 - OH686_00670 0.72 -1.0 133,079 + OH686_00670 0.74 -0.5 133,079 + OH686_00670 0.74 +0.5 133,079 + OH686_00670 0.74 -1.0 133,080 - OH686_00670 0.74 +0.7 133,251 - -1.1 133,281 + +0.8 133,281 + +1.3 133,282 - -0.7 133,282 - +1.1 133,282 - +1.8 133,282 - -1.3 133,282 - -1.4 133,282 - +3.7 133,290 + -2.7
Or see this region's nucleotide sequence