Experiment: a-Ketoglutaric (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_02685 and PS417_02690 overlap by 29 nucleotides PS417_02690 and PS417_02695 are separated by 181 nucleotides PS417_02695 and PS417_02700 are separated by 22 nucleotides
PS417_02685: PS417_02685 - cation diffusion facilitator family transporter, at 614,785 to 615,690
_02685
PS417_02690: PS417_02690 - N-acylglucosamine 2-epimerase, at 615,662 to 616,780
_02690
PS417_02695: PS417_02695 - protein hupE, at 616,962 to 617,534
_02695
PS417_02700: PS417_02700 - urease accessory protein UreG, at 617,557 to 618,171
_02700
Position (kb)
615
616
617 Strain fitness (log2 ratio)
-1
0
1 at 614.718 kb on + strand at 614.718 kb on + strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.719 kb on - strand at 614.723 kb on + strand at 614.738 kb on - strand at 615.061 kb on + strand, within PS417_02685 at 615.061 kb on + strand, within PS417_02685 at 615.061 kb on + strand, within PS417_02685 at 615.062 kb on - strand, within PS417_02685 at 615.062 kb on - strand, within PS417_02685 at 615.134 kb on - strand, within PS417_02685 at 615.166 kb on + strand, within PS417_02685 at 615.166 kb on + strand, within PS417_02685 at 615.167 kb on - strand, within PS417_02685 at 615.175 kb on + strand, within PS417_02685 at 615.176 kb on - strand, within PS417_02685 at 615.328 kb on + strand, within PS417_02685 at 615.328 kb on + strand, within PS417_02685 at 615.329 kb on - strand, within PS417_02685 at 615.413 kb on + strand, within PS417_02685 at 615.413 kb on + strand, within PS417_02685 at 615.496 kb on + strand, within PS417_02685 at 615.496 kb on + strand, within PS417_02685 at 615.496 kb on + strand, within PS417_02685 at 615.496 kb on + strand, within PS417_02685 at 615.497 kb on - strand, within PS417_02685 at 615.497 kb on - strand, within PS417_02685 at 615.497 kb on - strand, within PS417_02685 at 615.497 kb on - strand, within PS417_02685 at 615.497 kb on - strand, within PS417_02685 at 615.506 kb on - strand, within PS417_02685 at 615.542 kb on + strand, within PS417_02685 at 615.542 kb on + strand, within PS417_02685 at 615.542 kb on + strand, within PS417_02685 at 615.543 kb on - strand, within PS417_02685 at 615.543 kb on - strand, within PS417_02685 at 615.543 kb on - strand, within PS417_02685 at 615.543 kb on - strand, within PS417_02685 at 615.543 kb on - strand, within PS417_02685 at 615.663 kb on + strand at 615.699 kb on + strand at 615.892 kb on + strand, within PS417_02690 at 615.893 kb on - strand, within PS417_02690 at 616.087 kb on + strand, within PS417_02690 at 616.088 kb on - strand, within PS417_02690 at 616.303 kb on - strand, within PS417_02690 at 616.480 kb on - strand, within PS417_02690 at 616.596 kb on + strand, within PS417_02690 at 616.597 kb on - strand, within PS417_02690 at 616.597 kb on - strand, within PS417_02690 at 616.671 kb on + strand at 616.808 kb on - strand at 616.808 kb on - strand at 616.890 kb on + strand at 616.890 kb on + strand at 616.904 kb on - strand at 617.311 kb on - strand, within PS417_02695
Per-strain Table
Position Strand Gene LocusTag Fraction a-Ketoglutaric (C) remove 614,718 + -0.4 614,718 + +0.5 614,719 - +0.8 614,719 - -0.1 614,719 - -0.3 614,719 - +0.1 614,719 - -0.4 614,719 - -0.2 614,719 - +0.3 614,723 + +0.5 614,738 - -0.2 615,061 + PS417_02685 0.30 -0.8 615,061 + PS417_02685 0.30 +0.3 615,061 + PS417_02685 0.30 -0.7 615,062 - PS417_02685 0.31 -1.5 615,062 - PS417_02685 0.31 +0.2 615,134 - PS417_02685 0.39 -0.0 615,166 + PS417_02685 0.42 -1.0 615,166 + PS417_02685 0.42 -0.7 615,167 - PS417_02685 0.42 -0.3 615,175 + PS417_02685 0.43 +1.5 615,176 - PS417_02685 0.43 +0.3 615,328 + PS417_02685 0.60 +1.7 615,328 + PS417_02685 0.60 -0.5 615,329 - PS417_02685 0.60 +0.5 615,413 + PS417_02685 0.69 -0.6 615,413 + PS417_02685 0.69 -0.1 615,496 + PS417_02685 0.78 +0.3 615,496 + PS417_02685 0.78 +0.6 615,496 + PS417_02685 0.78 -0.2 615,496 + PS417_02685 0.78 +0.2 615,497 - PS417_02685 0.79 +0.0 615,497 - PS417_02685 0.79 -0.3 615,497 - PS417_02685 0.79 +0.4 615,497 - PS417_02685 0.79 -0.1 615,497 - PS417_02685 0.79 +0.4 615,506 - PS417_02685 0.80 +0.8 615,542 + PS417_02685 0.84 +0.0 615,542 + PS417_02685 0.84 +0.2 615,542 + PS417_02685 0.84 -0.9 615,543 - PS417_02685 0.84 +0.0 615,543 - PS417_02685 0.84 +0.6 615,543 - PS417_02685 0.84 -0.3 615,543 - PS417_02685 0.84 +0.2 615,543 - PS417_02685 0.84 -0.5 615,663 + -1.0 615,699 + -0.0 615,892 + PS417_02690 0.21 -1.0 615,893 - PS417_02690 0.21 -0.5 616,087 + PS417_02690 0.38 +0.3 616,088 - PS417_02690 0.38 -0.8 616,303 - PS417_02690 0.57 -0.6 616,480 - PS417_02690 0.73 -0.4 616,596 + PS417_02690 0.83 -1.5 616,597 - PS417_02690 0.84 -1.3 616,597 - PS417_02690 0.84 +0.1 616,671 + -1.2 616,808 - +0.8 616,808 - +0.6 616,890 + +0.1 616,890 + +0.0 616,904 - +0.3 617,311 - PS417_02695 0.61 +0.1
Or see this region's nucleotide sequence