Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4405

Experiment: m.b. Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.25 mg/ml
5,266,469	+		Echvi_4404	0.45	-2.0
5,266,560	+		Echvi_4404	0.52	+1.2
5,266,593	+		Echvi_4404	0.55	-1.4
5,266,594	-		Echvi_4404	0.55	-0.4
5,266,594	-		Echvi_4404	0.55	-1.7
5,266,627	+		Echvi_4404	0.57	-2.1
5,266,627	+		Echvi_4404	0.57	-2.9
5,266,628	-		Echvi_4404	0.57	-1.5
5,266,628	-		Echvi_4404	0.57	-0.3
5,266,628	-		Echvi_4404	0.57	-1.6
5,266,628	-		Echvi_4404	0.57	-1.1
5,266,629	+		Echvi_4404	0.57	-2.0
5,266,629	+		Echvi_4404	0.57	-2.0
5,266,629	+		Echvi_4404	0.57	-1.3
5,266,629	+		Echvi_4404	0.57	-2.3
5,266,630	-		Echvi_4404	0.57	+0.5
5,266,630	-		Echvi_4404	0.57	-1.4
5,266,631	+		Echvi_4404	0.57	-1.0
5,266,631	+		Echvi_4404	0.57	+0.2
5,266,631	+		Echvi_4404	0.57	-1.4
5,266,632	-		Echvi_4404	0.57	-2.2
5,266,632	-		Echvi_4404	0.57	+0.2
5,266,727	+		Echvi_4404	0.65	-0.7
5,266,746	-		Echvi_4404	0.66	-1.6
5,266,784	+		Echvi_4404	0.69	-0.6
5,266,848	-		Echvi_4404	0.74	-2.5
5,266,848	-		Echvi_4404	0.74	-2.1
5,266,854	+		Echvi_4404	0.74	-1.5
5,266,855	-		Echvi_4404	0.74	-0.5
5,266,900	-		Echvi_4404	0.78	-0.4
5,266,949	-		Echvi_4404	0.82	-1.6
5,267,016	+		Echvi_4404	0.87	-1.9
5,267,053	-		Echvi_4404	0.89	-0.9
5,267,053	-		Echvi_4404	0.89	-2.3
5,267,126	+				-1.8
5,267,127	-				-1.6
5,267,127	-				-2.2
5,267,127	-				-0.9
5,267,175	-				+0.3
5,267,175	-				-0.5
5,267,175	-				-0.9
5,267,205	-				-1.3
5,267,275	+				-0.9
5,267,284	+				-1.3
5,267,285	-				-0.7
5,267,285	-				-0.1
5,267,285	-				-2.0
5,267,285	-				-2.7
5,267,287	+				-1.1
5,267,287	+				-2.2
5,267,287	+				-1.1
5,267,287	+				-1.2
5,267,288	-				-0.7
5,267,288	-				-1.5
5,267,288	-				-0.9
5,267,288	-				-1.9
5,267,288	-				-1.6
5,267,288	-				-0.5
5,267,288	-				-1.0
5,267,288	-				-0.8
5,267,293	+				-0.9
5,267,293	+				-0.8
5,267,293	+				-0.7
5,267,293	+				-0.6
5,267,294	-				-1.1
5,267,294	-				-0.1
5,267,294	-				-1.1
5,267,294	-				-1.5
5,267,294	-				-1.5
5,267,294	-				-2.4
5,267,294	-				-1.2
5,267,294	-				-0.6
5,267,294	-				-1.4
5,267,294	-				-2.4
5,267,295	+				-2.3
5,267,296	-				-0.9
5,267,296	-				-1.5
5,267,308	+				-0.3
5,267,308	+				-0.8
5,267,309	-				-1.2
5,267,332	+				-0.9
5,267,333	-				-1.3
5,267,398	+				-0.9
5,267,403	-				-1.4
5,267,425	-				-2.2
5,267,446	+				+0.1
5,267,447	-				-2.3
5,267,447	-				-1.8
5,267,449	+				-0.3
5,267,449	+				-0.9
5,267,453	+				+0.4
5,267,477	-				-1.1
5,267,524	+		Echvi_4405	0.17	-0.2
5,267,547	+		Echvi_4405	0.21	-0.8
5,267,559	-		Echvi_4405	0.24	-2.0
5,267,575	+		Echvi_4405	0.26	+0.3
5,267,575	+		Echvi_4405	0.26	-1.0
5,267,613	+		Echvi_4405	0.34	-0.5
5,267,691	+		Echvi_4405	0.48	-0.4
5,267,692	-		Echvi_4405	0.48	-0.9
5,267,692	-		Echvi_4405	0.48	-1.3
5,267,692	-		Echvi_4405	0.48	-0.1
5,267,705	-		Echvi_4405	0.51	-0.8
5,267,785	-		Echvi_4405	0.65	-1.3
5,267,807	-		Echvi_4405	0.69	-2.8
5,267,819	+		Echvi_4405	0.72	-1.2
5,267,820	-		Echvi_4405	0.72	-0.4
5,267,869	+		Echvi_4405	0.81	-0.7
5,267,927	-				-0.6
5,267,992	+				+1.7
5,267,992	+				-0.3
5,267,992	+				-1.2
5,267,993	-				-0.9
5,268,047	+				+1.0
5,268,060	+				+1.4
5,268,188	+				-0.0
5,268,188	+				-0.3
5,268,190	+				-0.7
5,268,332	-				-0.2
5,268,350	+				+0.3
5,268,412	+				+0.0
5,268,413	-				+1.0
5,268,433	-				-0.5
5,268,458	-				-0.9
5,268,608	+				-0.4
5,268,676	-				+0.1
5,268,688	+				-0.1
5,268,724	+				+0.5
5,268,725	-				-0.0
5,268,818	+				-0.2
5,268,897	-				-0.4
5,268,945	-		Echvi_4406	0.13	-0.1