Experiment: m.b. Paraquat dichloride 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4195 and Echvi_4196 are separated by 403 nucleotides Echvi_4196 and Echvi_4197 are separated by 214 nucleotides
Echvi_4195: Echvi_4195 - Transposase and inactivated derivatives, at 5,008,805 to 5,010,367
_4195
Echvi_4196: Echvi_4196 - Transposase DDE domain., at 5,010,771 to 5,011,667
_4196
Echvi_4197: Echvi_4197 - anion transporter, at 5,011,882 to 5,013,357
_4197
Position (kb)
5010
5011
5012 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5010.045 kb on - strand, within Echvi_4195 at 5010.158 kb on + strand, within Echvi_4195 at 5010.159 kb on - strand, within Echvi_4195 at 5010.178 kb on + strand, within Echvi_4195 at 5010.206 kb on + strand, within Echvi_4195 at 5010.248 kb on + strand at 5010.263 kb on + strand at 5010.264 kb on - strand at 5010.302 kb on - strand at 5010.312 kb on + strand at 5010.313 kb on - strand at 5010.315 kb on - strand at 5010.349 kb on - strand at 5010.375 kb on - strand at 5010.380 kb on + strand at 5010.381 kb on - strand at 5010.385 kb on + strand at 5010.425 kb on - strand at 5010.469 kb on - strand at 5010.559 kb on + strand at 5010.559 kb on + strand at 5010.560 kb on - strand at 5010.560 kb on - strand at 5010.560 kb on - strand at 5010.564 kb on - strand at 5010.589 kb on - strand at 5010.591 kb on + strand at 5010.592 kb on - strand at 5010.664 kb on + strand at 5010.665 kb on - strand at 5010.784 kb on - strand at 5010.792 kb on - strand at 5011.894 kb on + strand at 5011.895 kb on - strand at 5011.895 kb on - strand at 5011.946 kb on + strand at 5011.946 kb on + strand at 5011.947 kb on - strand at 5012.074 kb on - strand, within Echvi_4197 at 5012.116 kb on - strand, within Echvi_4197 at 5012.130 kb on + strand, within Echvi_4197 at 5012.131 kb on - strand, within Echvi_4197 at 5012.305 kb on - strand, within Echvi_4197 at 5012.368 kb on + strand, within Echvi_4197 at 5012.369 kb on - strand, within Echvi_4197 at 5012.431 kb on - strand, within Echvi_4197 at 5012.497 kb on + strand, within Echvi_4197 at 5012.497 kb on + strand, within Echvi_4197 at 5012.497 kb on + strand, within Echvi_4197 at 5012.498 kb on - strand, within Echvi_4197 at 5012.498 kb on - strand, within Echvi_4197 at 5012.527 kb on + strand, within Echvi_4197 at 5012.622 kb on + strand, within Echvi_4197 at 5012.637 kb on - strand, within Echvi_4197 at 5012.648 kb on + strand, within Echvi_4197
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.25 mg/ml remove 5,010,045 - Echvi_4195 0.79 +0.7 5,010,158 + Echvi_4195 0.87 +0.7 5,010,159 - Echvi_4195 0.87 +0.2 5,010,178 + Echvi_4195 0.88 -0.6 5,010,206 + Echvi_4195 0.90 +1.0 5,010,248 + +1.9 5,010,263 + -1.0 5,010,264 - +0.6 5,010,302 - +0.8 5,010,312 + -1.3 5,010,313 - -0.2 5,010,315 - -1.0 5,010,349 - +0.0 5,010,375 - +0.3 5,010,380 + -1.2 5,010,381 - +1.3 5,010,385 + -0.0 5,010,425 - +0.4 5,010,469 - -0.9 5,010,559 + +0.9 5,010,559 + -0.1 5,010,560 - -0.8 5,010,560 - -0.5 5,010,560 - +0.3 5,010,564 - -0.7 5,010,589 - -0.6 5,010,591 + -0.2 5,010,592 - -0.2 5,010,664 + -0.0 5,010,665 - +0.5 5,010,784 - -0.1 5,010,792 - -0.4 5,011,894 + +0.3 5,011,895 - +0.3 5,011,895 - -0.1 5,011,946 + -0.1 5,011,946 + +0.2 5,011,947 - +0.1 5,012,074 - Echvi_4197 0.13 -2.2 5,012,116 - Echvi_4197 0.16 -0.6 5,012,130 + Echvi_4197 0.17 -0.0 5,012,131 - Echvi_4197 0.17 +0.2 5,012,305 - Echvi_4197 0.29 +0.2 5,012,368 + Echvi_4197 0.33 +0.2 5,012,369 - Echvi_4197 0.33 -0.5 5,012,431 - Echvi_4197 0.37 -0.7 5,012,497 + Echvi_4197 0.42 -0.1 5,012,497 + Echvi_4197 0.42 +0.4 5,012,497 + Echvi_4197 0.42 -0.1 5,012,498 - Echvi_4197 0.42 -0.7 5,012,498 - Echvi_4197 0.42 +0.1 5,012,527 + Echvi_4197 0.44 +0.4 5,012,622 + Echvi_4197 0.50 -0.6 5,012,637 - Echvi_4197 0.51 -1.4 5,012,648 + Echvi_4197 0.52 +0.5
Or see this region's nucleotide sequence