Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3209

Experiment: m.b. Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.25 mg/ml
3,807,189	-				+0.4
3,807,193	+				-0.2
3,807,194	-				-0.1
3,807,250	+				-1.0
3,807,261	+				+0.3
3,807,261	+				+0.2
3,807,290	-				-1.4
3,807,292	+				-0.4
3,807,292	+				-0.0
3,807,473	+		Echvi_3208	0.24	+0.0
3,807,474	-		Echvi_3208	0.24	+0.5
3,807,508	+		Echvi_3208	0.30	+0.4
3,807,521	+		Echvi_3208	0.32	+0.1
3,807,653	+		Echvi_3208	0.55	+0.1
3,807,658	+		Echvi_3208	0.56	-1.1
3,807,659	-		Echvi_3208	0.56	-1.6
3,807,659	-		Echvi_3208	0.56	-1.4
3,807,721	+		Echvi_3208	0.67	+1.0
3,807,775	+		Echvi_3208	0.76	+1.4
3,807,776	-		Echvi_3208	0.77	-1.0
3,807,782	+		Echvi_3208	0.78	-0.6
3,807,785	+		Echvi_3208	0.78	-0.4
3,807,785	+		Echvi_3208	0.78	+0.0
3,807,786	-		Echvi_3208	0.78	-0.4
3,807,786	-		Echvi_3208	0.78	-0.2
3,807,825	-		Echvi_3208	0.85	-0.9
3,807,833	-		Echvi_3208	0.86	-0.3
3,807,892	+				-0.3
3,807,893	-				+0.1
3,807,893	-				-1.0
3,807,935	+				+0.2
3,807,967	+				+0.1
3,807,967	+				+0.3
3,807,967	+				+0.4
3,807,968	-				+0.7
3,808,037	-				-1.0
3,808,064	-				+0.0
3,808,066	-				+0.7
3,808,071	-				-1.8
3,808,098	-				-0.3
3,808,108	+				+0.1
3,808,109	-				-0.9
3,808,109	-				-1.0
3,808,112	+				-0.9
3,808,200	+				+0.0
3,808,200	+				-0.7
3,808,201	-				+0.7
3,808,201	-				-0.7
3,808,209	+				-0.1
3,808,209	+				-1.5
3,808,209	+				+0.0
3,808,210	-				+0.1
3,808,210	-				-0.1
3,808,210	-				-0.5
3,808,210	-				-0.7
3,808,216	-				+0.4
3,808,256	-		Echvi_3209	0.14	+2.2
3,808,256	-		Echvi_3209	0.14	-0.5
3,808,335	+		Echvi_3209	0.25	-0.1
3,808,336	-		Echvi_3209	0.25	+0.6
3,808,336	-		Echvi_3209	0.25	+0.2
3,808,336	-		Echvi_3209	0.25	+1.0
3,808,336	-		Echvi_3209	0.25	-0.4
3,808,455	+		Echvi_3209	0.42	-0.1
3,808,455	+		Echvi_3209	0.42	+0.7
3,808,455	+		Echvi_3209	0.42	+2.3
3,808,455	+		Echvi_3209	0.42	-0.3
3,808,455	+		Echvi_3209	0.42	+0.4
3,808,459	+		Echvi_3209	0.43	-0.8
3,808,459	+		Echvi_3209	0.43	+0.2
3,808,460	-		Echvi_3209	0.43	+0.4
3,808,566	+		Echvi_3209	0.58	+0.9
3,808,566	+		Echvi_3209	0.58	+1.7
3,808,568	-		Echvi_3209	0.59	-1.5
3,808,640	-		Echvi_3209	0.69	+0.5
3,808,773	-		Echvi_3209	0.88	+0.0
3,808,812	+				-0.2
3,808,813	-				+1.3
3,808,813	-				+0.9
3,808,813	-				-0.7
3,808,818	+				+1.0
3,808,819	-				+0.4
3,808,819	-				+1.1
3,808,819	-				-0.4
3,808,882	+				-0.1
3,808,924	+				-1.2
3,808,953	+		Echvi_3210	0.14	+0.8
3,808,956	+		Echvi_3210	0.15	+0.1
3,808,958	+		Echvi_3210	0.15	-0.8
3,808,959	-		Echvi_3210	0.15	+0.7
3,808,973	+		Echvi_3210	0.18	-0.4
3,808,973	+		Echvi_3210	0.18	-0.2
3,808,974	-		Echvi_3210	0.18	-0.7
3,808,985	+		Echvi_3210	0.20	+0.1
3,808,985	+		Echvi_3210	0.20	+0.1
3,808,991	+		Echvi_3210	0.22	-0.9
3,808,994	-		Echvi_3210	0.22	-1.5
3,809,065	+		Echvi_3210	0.36	-1.0
3,809,110	+		Echvi_3210	0.45	-0.1
3,809,110	+		Echvi_3210	0.45	+1.3
3,809,111	-		Echvi_3210	0.45	-0.4
3,809,111	-		Echvi_3210	0.45	-1.0
3,809,172	-		Echvi_3210	0.57	+0.4
3,809,173	+		Echvi_3210	0.57	-0.3
3,809,174	-		Echvi_3210	0.57	+0.0
3,809,174	-		Echvi_3210	0.57	-1.0
3,809,178	+		Echvi_3210	0.58	+1.5
3,809,179	-		Echvi_3210	0.58	+1.4
3,809,179	-		Echvi_3210	0.58	-0.3
3,809,179	-		Echvi_3210	0.58	-0.0
3,809,180	+		Echvi_3210	0.59	-0.7
3,809,180	+		Echvi_3210	0.59	-0.1
3,809,180	+		Echvi_3210	0.59	-1.1
3,809,180	+		Echvi_3210	0.59	-1.8
3,809,181	-		Echvi_3210	0.59	-1.7
3,809,181	-		Echvi_3210	0.59	-1.8
3,809,190	+		Echvi_3210	0.61	-2.3
3,809,200	+		Echvi_3210	0.63	-0.2
3,809,212	+		Echvi_3210	0.65	-0.2
3,809,288	+		Echvi_3210	0.80	-0.7
3,809,289	-		Echvi_3210	0.80	-0.9
3,809,363	+				+0.1
3,809,363	+				-1.0
3,809,363	+				-0.6
3,809,364	-				-0.5
3,809,406	+				+1.7
3,809,406	-				-0.6
3,809,407	+				+0.5
3,809,407	+				-0.1
3,809,408	-				-1.6
3,809,410	+				+0.4
3,809,410	+				-1.3
3,809,410	+				+0.3
3,809,411	-				-1.3
3,809,411	-				-1.0
3,809,417	+				+1.0
3,809,417	+				+0.1
3,809,417	+				+0.2
3,809,418	-				-0.1
3,809,422	+				+0.3
3,809,422	+				+0.7
3,809,520	+		Echvi_3211	0.21	-0.3
3,809,546	+		Echvi_3211	0.27	-0.2
3,809,546	+		Echvi_3211	0.27	-0.8
3,809,547	-		Echvi_3211	0.27	+0.5
3,809,638	-		Echvi_3211	0.45	-2.1
3,809,638	-		Echvi_3211	0.45	-1.8
3,809,775	+		Echvi_3211	0.73	+1.3
3,809,777	+		Echvi_3211	0.74	-0.0
3,809,777	+		Echvi_3211	0.74	-0.2
3,809,777	+		Echvi_3211	0.74	-0.5
3,809,787	-		Echvi_3211	0.76	-1.0
3,809,817	+		Echvi_3211	0.82	-0.1
3,809,817	+		Echvi_3211	0.82	-1.1
3,809,817	+		Echvi_3211	0.82	-0.0
3,809,817	+		Echvi_3211	0.82	-0.4
3,809,817	+		Echvi_3211	0.82	+0.3
3,809,818	-		Echvi_3211	0.82	-0.2