Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1799

Experiment: m.b. Paraquat dichloride 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Paraquat dichloride 0.25 mg/ml
2,114,855	+				-0.2
2,114,856	-				-1.2
2,114,884	-				-0.8
2,114,951	-				+0.3
2,114,961	+				-0.1
2,114,965	+				-0.4
2,115,026	-				+0.7
2,115,033	-				+0.2
2,115,035	+				+0.6
2,115,096	+		Echvi_1798	0.16	+0.6
2,115,100	-		Echvi_1798	0.16	-0.6
2,115,235	+		Echvi_1798	0.32	-0.2
2,115,235	+		Echvi_1798	0.32	-1.1
2,115,236	-		Echvi_1798	0.32	+1.0
2,115,236	-		Echvi_1798	0.32	-0.3
2,115,236	-		Echvi_1798	0.32	-0.3
2,115,306	+		Echvi_1798	0.40	-1.5
2,115,306	+		Echvi_1798	0.40	-0.3
2,115,320	+		Echvi_1798	0.42	-1.3
2,115,349	+		Echvi_1798	0.45	+0.7
2,115,387	+		Echvi_1798	0.49	+0.5
2,115,388	-		Echvi_1798	0.50	-0.1
2,115,482	+		Echvi_1798	0.60	-0.2
2,115,487	+		Echvi_1798	0.61	-0.5
2,115,488	-		Echvi_1798	0.61	+1.3
2,115,488	-		Echvi_1798	0.61	-0.5
2,115,513	-		Echvi_1798	0.64	-0.1
2,115,577	+		Echvi_1798	0.71	+0.1
2,115,578	-		Echvi_1798	0.72	-1.5
2,115,578	-		Echvi_1798	0.72	-0.1
2,115,578	-		Echvi_1798	0.72	+0.2
2,115,625	-		Echvi_1798	0.77	+0.4
2,115,666	-		Echvi_1798	0.82	+0.7
2,115,666	-		Echvi_1798	0.82	-0.1
2,115,720	-		Echvi_1798	0.88	+0.4
2,115,724	+		Echvi_1798	0.88	-0.8
2,115,725	-		Echvi_1798	0.89	+0.1
2,115,725	-		Echvi_1798	0.89	-0.3
2,115,725	-		Echvi_1798	0.89	+0.1
2,115,768	+				+1.7
2,115,769	-				+0.2
2,115,769	-				+0.8
2,115,769	-				+0.7
2,115,769	-				+0.3
2,115,769	-				-0.6
2,115,812	+				+0.7
2,115,874	+				+0.2
2,115,881	+				+1.7
2,115,882	-				+1.6
2,115,884	-				-1.2
2,116,101	+		Echvi_1799	0.29	+0.4
2,116,114	-		Echvi_1799	0.30	-1.8
2,116,118	+		Echvi_1799	0.31	+0.6
2,116,133	-		Echvi_1799	0.32	-0.5
2,116,179	-		Echvi_1799	0.37	-0.9
2,116,179	-		Echvi_1799	0.37	-2.3
2,116,179	-		Echvi_1799	0.37	-1.5
2,116,225	-		Echvi_1799	0.42	-1.6
2,116,231	+		Echvi_1799	0.42	-1.5
2,116,231	+		Echvi_1799	0.42	+0.2
2,116,232	-		Echvi_1799	0.42	-0.0
2,116,254	-		Echvi_1799	0.45	+0.0
2,116,271	-		Echvi_1799	0.46	-1.0
2,116,374	+		Echvi_1799	0.57	-0.3
2,116,404	+		Echvi_1799	0.60	+2.2
2,116,431	+		Echvi_1799	0.62	-1.5
2,116,474	-		Echvi_1799	0.67	-0.5
2,116,521	+		Echvi_1799	0.72	-1.0
2,116,527	+		Echvi_1799	0.72	-0.3
2,116,527	+		Echvi_1799	0.72	-0.4
2,116,527	+		Echvi_1799	0.72	-0.3
2,116,528	-		Echvi_1799	0.72	+0.2
2,116,528	-		Echvi_1799	0.72	+0.1
2,116,567	-		Echvi_1799	0.76	-0.1
2,116,619	-		Echvi_1799	0.82	-0.2
2,116,732	+				-0.3
2,116,733	-				+0.5
2,116,769	-				-0.3
2,116,774	-				+0.0
2,116,803	+				-1.1
2,116,803	+				-0.8
2,116,803	+				-0.5
2,116,804	-				-0.2
2,116,804	-				-2.6
2,116,804	-				-1.2
2,116,850	-				+0.7
2,116,862	+				-1.2
2,116,909	+				-0.6
2,116,910	-				+0.0
2,117,047	+		Echvi_1800	0.29	+1.5
2,117,048	-		Echvi_1800	0.29	-0.6
2,117,071	-		Echvi_1800	0.33	+0.4
2,117,137	+		Echvi_1800	0.43	+0.0
2,117,144	-		Echvi_1800	0.44	-0.3
2,117,196	-		Echvi_1800	0.53	+0.2
2,117,206	-		Echvi_1800	0.54	+0.1
2,117,245	+		Echvi_1800	0.60	+0.5
2,117,246	-		Echvi_1800	0.61	+1.1
2,117,290	+		Echvi_1800	0.67	-1.2
2,117,291	-		Echvi_1800	0.68	+0.9
2,117,323	+				+1.2
2,117,418	+		Echvi_1800	0.88	+0.5
2,117,477	-				-1.1
2,117,477	-				+0.4
2,117,478	+				+2.2
2,117,479	-				-1.3
2,117,479	-				+0.9
2,117,479	-				+0.1
2,117,570	+				+1.1
2,117,571	-				+0.4
2,117,616	+				-0.7
2,117,617	-				+0.1
2,117,617	-				-0.7
2,117,617	-				+0.4
2,117,647	+				-1.1
2,117,693	+		Echvi_1801	0.11	+0.1
2,117,693	+		Echvi_1801	0.11	+0.5
2,117,770	-		Echvi_1801	0.17	+1.8
2,117,785	-		Echvi_1801	0.18	+0.2
2,117,785	-		Echvi_1801	0.18	+0.2