Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20335 and CA264_20340 are separated by 90 nucleotides CA264_20340 and CA264_20345 are separated by 66 nucleotides CA264_20345 and CA264_20350 are separated by 126 nucleotides
CA264_20335: CA264_20335 - isoaspartyl peptidase/L-asparaginase, at 4,684,767 to 4,685,798
_20335
CA264_20340: CA264_20340 - STAS/SEC14 domain-containing protein, at 4,685,889 to 4,686,245
_20340
CA264_20345: CA264_20345 - hypothetical protein, at 4,686,312 to 4,686,728
_20345
CA264_20350: CA264_20350 - hypothetical protein, at 4,686,855 to 4,688,786
_20350
Position (kb)
4685
4686
4687 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4684.960 kb on - strand, within CA264_20335 at 4685.000 kb on - strand, within CA264_20335 at 4685.006 kb on + strand, within CA264_20335 at 4685.007 kb on - strand, within CA264_20335 at 4685.007 kb on - strand, within CA264_20335 at 4685.007 kb on - strand, within CA264_20335 at 4685.011 kb on + strand, within CA264_20335 at 4685.040 kb on - strand, within CA264_20335 at 4685.141 kb on - strand, within CA264_20335 at 4685.150 kb on + strand, within CA264_20335 at 4685.151 kb on - strand, within CA264_20335 at 4685.180 kb on + strand, within CA264_20335 at 4685.421 kb on + strand, within CA264_20335 at 4685.514 kb on + strand, within CA264_20335 at 4685.562 kb on + strand, within CA264_20335 at 4685.562 kb on + strand, within CA264_20335 at 4685.563 kb on - strand, within CA264_20335 at 4685.592 kb on - strand, within CA264_20335 at 4685.610 kb on + strand, within CA264_20335 at 4685.611 kb on - strand, within CA264_20335 at 4685.745 kb on + strand at 4685.782 kb on - strand at 4685.782 kb on - strand at 4685.782 kb on - strand at 4685.787 kb on + strand at 4685.796 kb on + strand at 4685.797 kb on - strand at 4686.053 kb on + strand, within CA264_20340 at 4686.057 kb on - strand, within CA264_20340 at 4686.075 kb on + strand, within CA264_20340 at 4686.099 kb on + strand, within CA264_20340 at 4686.100 kb on - strand, within CA264_20340 at 4686.109 kb on + strand, within CA264_20340 at 4686.109 kb on + strand, within CA264_20340 at 4686.162 kb on + strand, within CA264_20340 at 4686.162 kb on + strand, within CA264_20340 at 4686.163 kb on - strand, within CA264_20340 at 4686.170 kb on - strand, within CA264_20340 at 4686.184 kb on - strand, within CA264_20340 at 4686.232 kb on - strand at 4686.232 kb on - strand at 4686.232 kb on - strand at 4686.234 kb on + strand at 4686.235 kb on - strand at 4686.240 kb on + strand at 4686.241 kb on - strand at 4686.241 kb on - strand at 4686.251 kb on + strand at 4686.252 kb on - strand at 4686.252 kb on - strand at 4686.254 kb on - strand at 4686.266 kb on + strand at 4686.267 kb on - strand at 4686.267 kb on - strand at 4686.276 kb on + strand at 4686.387 kb on + strand, within CA264_20345 at 4686.388 kb on - strand, within CA264_20345 at 4686.565 kb on - strand, within CA264_20345 at 4686.565 kb on - strand, within CA264_20345 at 4686.565 kb on - strand, within CA264_20345 at 4686.570 kb on + strand, within CA264_20345 at 4686.571 kb on - strand, within CA264_20345 at 4686.582 kb on + strand, within CA264_20345 at 4686.643 kb on - strand, within CA264_20345 at 4686.653 kb on + strand, within CA264_20345 at 4686.654 kb on - strand, within CA264_20345 at 4686.654 kb on - strand, within CA264_20345 at 4686.738 kb on - strand at 4686.744 kb on - strand at 4686.745 kb on + strand at 4686.775 kb on + strand at 4686.775 kb on + strand at 4686.775 kb on + strand at 4686.775 kb on + strand at 4686.776 kb on - strand at 4686.776 kb on - strand at 4686.777 kb on + strand at 4686.779 kb on + strand at 4686.865 kb on + strand at 4686.865 kb on + strand at 4686.865 kb on + strand at 4686.866 kb on - strand at 4686.866 kb on - strand at 4686.889 kb on + strand at 4686.925 kb on + strand at 4686.926 kb on - strand at 4686.945 kb on - strand at 4686.945 kb on - strand at 4686.948 kb on + strand at 4686.948 kb on + strand at 4686.948 kb on + strand at 4686.949 kb on - strand at 4687.002 kb on + strand at 4687.002 kb on + strand at 4687.002 kb on + strand at 4687.002 kb on + strand at 4687.003 kb on - strand at 4687.003 kb on - strand at 4687.003 kb on - strand at 4687.008 kb on + strand at 4687.155 kb on + strand, within CA264_20350 at 4687.199 kb on + strand, within CA264_20350 at 4687.199 kb on + strand, within CA264_20350 at 4687.245 kb on - strand, within CA264_20350
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 4,684,960 - CA264_20335 0.19 -0.5 4,685,000 - CA264_20335 0.23 +0.4 4,685,006 + CA264_20335 0.23 +0.0 4,685,007 - CA264_20335 0.23 +0.4 4,685,007 - CA264_20335 0.23 -0.6 4,685,007 - CA264_20335 0.23 +0.1 4,685,011 + CA264_20335 0.24 +0.1 4,685,040 - CA264_20335 0.26 -0.0 4,685,141 - CA264_20335 0.36 +0.8 4,685,150 + CA264_20335 0.37 +0.3 4,685,151 - CA264_20335 0.37 +0.0 4,685,180 + CA264_20335 0.40 -0.4 4,685,421 + CA264_20335 0.63 +0.2 4,685,514 + CA264_20335 0.72 -0.3 4,685,562 + CA264_20335 0.77 +2.3 4,685,562 + CA264_20335 0.77 -0.4 4,685,563 - CA264_20335 0.77 -0.9 4,685,592 - CA264_20335 0.80 -0.4 4,685,610 + CA264_20335 0.82 -0.3 4,685,611 - CA264_20335 0.82 +0.5 4,685,745 + -1.0 4,685,782 - +0.7 4,685,782 - -0.4 4,685,782 - +1.0 4,685,787 + -0.4 4,685,796 + +0.5 4,685,797 - -0.3 4,686,053 + CA264_20340 0.46 -0.4 4,686,057 - CA264_20340 0.47 +0.1 4,686,075 + CA264_20340 0.52 -0.3 4,686,099 + CA264_20340 0.59 -1.2 4,686,100 - CA264_20340 0.59 +0.6 4,686,109 + CA264_20340 0.62 +0.4 4,686,109 + CA264_20340 0.62 -0.1 4,686,162 + CA264_20340 0.76 -0.6 4,686,162 + CA264_20340 0.76 -0.8 4,686,163 - CA264_20340 0.77 -1.0 4,686,170 - CA264_20340 0.79 -0.0 4,686,184 - CA264_20340 0.83 -0.3 4,686,232 - -1.7 4,686,232 - -0.9 4,686,232 - +0.9 4,686,234 + -0.8 4,686,235 - +0.2 4,686,240 + -0.3 4,686,241 - +0.6 4,686,241 - -0.4 4,686,251 + -0.1 4,686,252 - -0.2 4,686,252 - -0.2 4,686,254 - +1.3 4,686,266 + -1.0 4,686,267 - -1.1 4,686,267 - -0.3 4,686,276 + -1.1 4,686,387 + CA264_20345 0.18 -0.1 4,686,388 - CA264_20345 0.18 -1.1 4,686,565 - CA264_20345 0.61 -2.1 4,686,565 - CA264_20345 0.61 +0.3 4,686,565 - CA264_20345 0.61 +0.0 4,686,570 + CA264_20345 0.62 -1.5 4,686,571 - CA264_20345 0.62 -0.6 4,686,582 + CA264_20345 0.65 -1.6 4,686,643 - CA264_20345 0.79 -0.1 4,686,653 + CA264_20345 0.82 -0.3 4,686,654 - CA264_20345 0.82 +0.8 4,686,654 - CA264_20345 0.82 -0.1 4,686,738 - -0.9 4,686,744 - +0.6 4,686,745 + +0.2 4,686,775 + +0.1 4,686,775 + +0.1 4,686,775 + -0.1 4,686,775 + -1.3 4,686,776 - -0.5 4,686,776 - -0.6 4,686,777 + +0.7 4,686,779 + +2.1 4,686,865 + -0.1 4,686,865 + +0.1 4,686,865 + +0.2 4,686,866 - +0.2 4,686,866 - +1.2 4,686,889 + +0.0 4,686,925 + -0.3 4,686,926 - +0.1 4,686,945 - -0.1 4,686,945 - -0.4 4,686,948 + -1.0 4,686,948 + +0.5 4,686,948 + +0.0 4,686,949 - -0.4 4,687,002 + +0.4 4,687,002 + +0.0 4,687,002 + -0.2 4,687,002 + +0.0 4,687,003 - -0.7 4,687,003 - +0.2 4,687,003 - -0.8 4,687,008 + -1.0 4,687,155 + CA264_20350 0.16 +0.0 4,687,199 + CA264_20350 0.18 -0.1 4,687,199 + CA264_20350 0.18 -2.4 4,687,245 - CA264_20350 0.20 -0.2
Or see this region's nucleotide sequence