Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13295 and CA264_13300 are separated by 6 nucleotides CA264_13300 and CA264_13305 are separated by 143 nucleotides
CA264_13295: CA264_13295 - rhomboid family intramembrane serine protease, at 3,099,646 to 3,100,554
_13295
CA264_13300: CA264_13300 - rhomboid family intramembrane serine protease, at 3,100,561 to 3,101,340
_13300
CA264_13305: CA264_13305 - DNA mismatch repair protein MutL, at 3,101,484 to 3,103,346
_13305
Position (kb)
3100
3101
3102 Strain fitness (log2 ratio)
-2
-1
0
1 at 3099.925 kb on - strand, within CA264_13295 at 3099.967 kb on - strand, within CA264_13295 at 3100.028 kb on + strand, within CA264_13295 at 3100.028 kb on + strand, within CA264_13295 at 3100.028 kb on + strand, within CA264_13295 at 3100.029 kb on - strand, within CA264_13295 at 3100.099 kb on + strand, within CA264_13295 at 3100.135 kb on - strand at 3100.135 kb on - strand, within CA264_13295 at 3100.224 kb on - strand, within CA264_13295 at 3100.224 kb on - strand, within CA264_13295 at 3100.281 kb on - strand, within CA264_13295 at 3100.281 kb on - strand, within CA264_13295 at 3100.413 kb on - strand, within CA264_13295 at 3100.507 kb on - strand at 3100.534 kb on + strand at 3100.535 kb on - strand at 3100.535 kb on - strand at 3100.537 kb on - strand at 3100.546 kb on + strand at 3100.547 kb on - strand at 3100.549 kb on - strand at 3100.549 kb on - strand at 3100.556 kb on - strand at 3100.562 kb on + strand at 3100.562 kb on + strand at 3100.565 kb on + strand at 3100.565 kb on + strand at 3100.565 kb on + strand at 3100.566 kb on - strand at 3100.566 kb on - strand at 3100.566 kb on - strand at 3100.570 kb on - strand at 3100.581 kb on + strand at 3100.582 kb on - strand at 3100.603 kb on + strand at 3100.603 kb on + strand at 3100.603 kb on + strand at 3100.604 kb on - strand at 3100.604 kb on - strand at 3100.605 kb on + strand at 3100.605 kb on + strand at 3100.606 kb on - strand at 3100.645 kb on + strand, within CA264_13300 at 3100.645 kb on + strand, within CA264_13300 at 3100.680 kb on - strand, within CA264_13300 at 3100.729 kb on + strand, within CA264_13300 at 3100.730 kb on - strand, within CA264_13300 at 3100.730 kb on - strand, within CA264_13300 at 3100.730 kb on - strand, within CA264_13300 at 3100.730 kb on - strand, within CA264_13300 at 3100.850 kb on + strand, within CA264_13300 at 3100.850 kb on + strand, within CA264_13300 at 3100.850 kb on + strand, within CA264_13300 at 3100.851 kb on - strand, within CA264_13300 at 3100.877 kb on - strand, within CA264_13300 at 3100.880 kb on + strand, within CA264_13300 at 3100.880 kb on + strand, within CA264_13300 at 3100.881 kb on - strand, within CA264_13300 at 3100.881 kb on - strand, within CA264_13300 at 3100.943 kb on + strand, within CA264_13300 at 3100.959 kb on - strand, within CA264_13300 at 3100.959 kb on - strand, within CA264_13300 at 3100.959 kb on - strand, within CA264_13300 at 3100.964 kb on + strand, within CA264_13300 at 3100.964 kb on + strand, within CA264_13300 at 3100.994 kb on + strand, within CA264_13300 at 3100.994 kb on + strand, within CA264_13300 at 3101.136 kb on + strand, within CA264_13300 at 3101.235 kb on - strand, within CA264_13300 at 3101.237 kb on + strand, within CA264_13300 at 3101.237 kb on + strand, within CA264_13300 at 3101.264 kb on - strand at 3101.354 kb on + strand at 3101.457 kb on + strand at 3102.031 kb on - strand, within CA264_13305
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 3,099,925 - CA264_13295 0.31 -1.3 3,099,967 - CA264_13295 0.35 -1.2 3,100,028 + CA264_13295 0.42 -0.5 3,100,028 + CA264_13295 0.42 +0.8 3,100,028 + CA264_13295 0.42 -0.3 3,100,029 - CA264_13295 0.42 -0.6 3,100,099 + CA264_13295 0.50 +1.0 3,100,135 - +0.8 3,100,135 - CA264_13295 0.54 -1.1 3,100,224 - CA264_13295 0.64 -0.3 3,100,224 - CA264_13295 0.64 -1.3 3,100,281 - CA264_13295 0.70 -0.2 3,100,281 - CA264_13295 0.70 -0.4 3,100,413 - CA264_13295 0.84 -1.0 3,100,507 - -1.6 3,100,534 + -0.1 3,100,535 - +0.6 3,100,535 - -0.2 3,100,537 - +0.0 3,100,546 + +0.4 3,100,547 - -0.3 3,100,549 - +0.0 3,100,549 - -1.0 3,100,556 - +0.8 3,100,562 + -1.1 3,100,562 + -0.8 3,100,565 + +0.2 3,100,565 + -0.3 3,100,565 + -1.4 3,100,566 - -0.9 3,100,566 - -0.6 3,100,566 - -0.2 3,100,570 - -0.2 3,100,581 + -0.0 3,100,582 - -2.3 3,100,603 + -0.6 3,100,603 + -0.7 3,100,603 + -1.9 3,100,604 - -0.7 3,100,604 - -0.4 3,100,605 + -0.4 3,100,605 + -0.1 3,100,606 - -0.4 3,100,645 + CA264_13300 0.11 -0.6 3,100,645 + CA264_13300 0.11 -0.7 3,100,680 - CA264_13300 0.15 -1.0 3,100,729 + CA264_13300 0.22 -0.7 3,100,730 - CA264_13300 0.22 -2.2 3,100,730 - CA264_13300 0.22 -1.4 3,100,730 - CA264_13300 0.22 -0.1 3,100,730 - CA264_13300 0.22 -1.6 3,100,850 + CA264_13300 0.37 -1.2 3,100,850 + CA264_13300 0.37 -0.1 3,100,850 + CA264_13300 0.37 -0.8 3,100,851 - CA264_13300 0.37 -0.5 3,100,877 - CA264_13300 0.41 -0.9 3,100,880 + CA264_13300 0.41 +1.0 3,100,880 + CA264_13300 0.41 -1.3 3,100,881 - CA264_13300 0.41 -0.3 3,100,881 - CA264_13300 0.41 +0.2 3,100,943 + CA264_13300 0.49 -0.6 3,100,959 - CA264_13300 0.51 +0.0 3,100,959 - CA264_13300 0.51 -1.1 3,100,959 - CA264_13300 0.51 -1.4 3,100,964 + CA264_13300 0.52 -0.8 3,100,964 + CA264_13300 0.52 -0.8 3,100,994 + CA264_13300 0.56 -1.2 3,100,994 + CA264_13300 0.56 -1.1 3,101,136 + CA264_13300 0.74 -1.4 3,101,235 - CA264_13300 0.86 -0.5 3,101,237 + CA264_13300 0.87 -0.5 3,101,237 + CA264_13300 0.87 +0.4 3,101,264 - -0.2 3,101,354 + -0.6 3,101,457 + -0.9 3,102,031 - CA264_13305 0.29 +0.2
Or see this region's nucleotide sequence