Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13055 and CA264_13060 are separated by 388 nucleotides CA264_13060 and CA264_13065 are separated by 117 nucleotides
CA264_13055: CA264_13055 - alpha-glucosidase, at 3,043,315 to 3,045,450
_13055
CA264_13060: CA264_13060 - tRNA-Ser, at 3,045,839 to 3,045,926
_13060
CA264_13065: CA264_13065 - DUF4153 domain-containing protein, at 3,046,044 to 3,047,912
_13065
Position (kb)
3045
3046 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3044.906 kb on - strand, within CA264_13055 at 3044.920 kb on - strand, within CA264_13055 at 3044.920 kb on - strand, within CA264_13055 at 3044.925 kb on + strand, within CA264_13055 at 3044.925 kb on + strand, within CA264_13055 at 3044.926 kb on - strand, within CA264_13055 at 3044.936 kb on + strand, within CA264_13055 at 3044.937 kb on - strand, within CA264_13055 at 3044.937 kb on - strand, within CA264_13055 at 3044.951 kb on + strand, within CA264_13055 at 3044.995 kb on - strand, within CA264_13055 at 3045.152 kb on + strand, within CA264_13055 at 3045.277 kb on + strand at 3045.309 kb on + strand at 3045.310 kb on - strand at 3045.312 kb on - strand at 3045.316 kb on + strand at 3045.316 kb on + strand at 3045.316 kb on + strand at 3045.317 kb on - strand at 3045.317 kb on - strand at 3045.351 kb on + strand at 3045.412 kb on - strand at 3045.479 kb on - strand at 3045.502 kb on - strand at 3045.502 kb on - strand at 3045.502 kb on - strand at 3045.504 kb on - strand at 3045.504 kb on - strand at 3045.543 kb on - strand at 3045.588 kb on - strand at 3045.641 kb on - strand at 3045.681 kb on + strand at 3045.681 kb on + strand at 3045.689 kb on + strand at 3045.828 kb on + strand at 3045.999 kb on + strand at 3046.000 kb on - strand at 3046.108 kb on + strand at 3046.131 kb on + strand at 3046.186 kb on - strand at 3046.186 kb on - strand at 3046.243 kb on - strand, within CA264_13065 at 3046.267 kb on + strand, within CA264_13065 at 3046.274 kb on + strand, within CA264_13065 at 3046.322 kb on + strand, within CA264_13065 at 3046.322 kb on + strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.325 kb on - strand, within CA264_13065 at 3046.325 kb on - strand, within CA264_13065 at 3046.350 kb on + strand, within CA264_13065 at 3046.350 kb on + strand, within CA264_13065 at 3046.351 kb on - strand, within CA264_13065 at 3046.351 kb on - strand, within CA264_13065 at 3046.444 kb on + strand, within CA264_13065 at 3046.445 kb on - strand, within CA264_13065 at 3046.445 kb on - strand, within CA264_13065 at 3046.492 kb on - strand, within CA264_13065 at 3046.563 kb on + strand, within CA264_13065 at 3046.563 kb on + strand, within CA264_13065 at 3046.563 kb on + strand, within CA264_13065 at 3046.563 kb on + strand, within CA264_13065 at 3046.563 kb on + strand, within CA264_13065 at 3046.563 kb on + strand, within CA264_13065 at 3046.563 kb on + strand, within CA264_13065 at 3046.564 kb on - strand, within CA264_13065 at 3046.564 kb on - strand, within CA264_13065 at 3046.564 kb on - strand, within CA264_13065 at 3046.565 kb on + strand, within CA264_13065 at 3046.565 kb on + strand, within CA264_13065 at 3046.565 kb on + strand, within CA264_13065 at 3046.565 kb on + strand, within CA264_13065 at 3046.565 kb on + strand, within CA264_13065 at 3046.568 kb on + strand, within CA264_13065 at 3046.820 kb on + strand, within CA264_13065 at 3046.820 kb on + strand, within CA264_13065 at 3046.827 kb on + strand, within CA264_13065 at 3046.829 kb on + strand, within CA264_13065 at 3046.830 kb on - strand, within CA264_13065 at 3046.910 kb on - strand, within CA264_13065 at 3046.910 kb on - strand, within CA264_13065
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 3,044,906 - CA264_13055 0.74 +0.2 3,044,920 - CA264_13055 0.75 -0.2 3,044,920 - CA264_13055 0.75 -0.3 3,044,925 + CA264_13055 0.75 -0.2 3,044,925 + CA264_13055 0.75 -0.8 3,044,926 - CA264_13055 0.75 -0.2 3,044,936 + CA264_13055 0.76 +0.7 3,044,937 - CA264_13055 0.76 +0.6 3,044,937 - CA264_13055 0.76 -0.2 3,044,951 + CA264_13055 0.77 -0.8 3,044,995 - CA264_13055 0.79 -0.6 3,045,152 + CA264_13055 0.86 +0.5 3,045,277 + -0.3 3,045,309 + -0.3 3,045,310 - +1.2 3,045,312 - -1.4 3,045,316 + +0.7 3,045,316 + -0.3 3,045,316 + +0.1 3,045,317 - -0.2 3,045,317 - -0.5 3,045,351 + +0.3 3,045,412 - -0.1 3,045,479 - -1.0 3,045,502 - -0.2 3,045,502 - +0.3 3,045,502 - -0.3 3,045,504 - +0.7 3,045,504 - +1.8 3,045,543 - -0.7 3,045,588 - -0.8 3,045,641 - +1.2 3,045,681 + -0.1 3,045,681 + -0.2 3,045,689 + +0.4 3,045,828 + +0.9 3,045,999 + -0.5 3,046,000 - -0.4 3,046,108 + -0.6 3,046,131 + -0.2 3,046,186 - -0.2 3,046,186 - -1.3 3,046,243 - CA264_13065 0.11 +0.4 3,046,267 + CA264_13065 0.12 +0.3 3,046,274 + CA264_13065 0.12 +0.1 3,046,322 + CA264_13065 0.15 -0.0 3,046,322 + CA264_13065 0.15 +0.2 3,046,323 - CA264_13065 0.15 -0.1 3,046,323 - CA264_13065 0.15 -0.2 3,046,323 - CA264_13065 0.15 +0.3 3,046,323 - CA264_13065 0.15 +0.8 3,046,325 - CA264_13065 0.15 -0.0 3,046,325 - CA264_13065 0.15 -0.1 3,046,350 + CA264_13065 0.16 +0.2 3,046,350 + CA264_13065 0.16 -0.1 3,046,351 - CA264_13065 0.16 -0.3 3,046,351 - CA264_13065 0.16 -1.5 3,046,444 + CA264_13065 0.21 -1.0 3,046,445 - CA264_13065 0.21 +0.2 3,046,445 - CA264_13065 0.21 -0.5 3,046,492 - CA264_13065 0.24 +0.1 3,046,563 + CA264_13065 0.28 +0.0 3,046,563 + CA264_13065 0.28 -0.3 3,046,563 + CA264_13065 0.28 +0.7 3,046,563 + CA264_13065 0.28 -0.0 3,046,563 + CA264_13065 0.28 -0.1 3,046,563 + CA264_13065 0.28 +0.1 3,046,563 + CA264_13065 0.28 -1.2 3,046,564 - CA264_13065 0.28 +0.1 3,046,564 - CA264_13065 0.28 -0.2 3,046,564 - CA264_13065 0.28 -0.3 3,046,565 + CA264_13065 0.28 +0.2 3,046,565 + CA264_13065 0.28 +0.1 3,046,565 + CA264_13065 0.28 +0.7 3,046,565 + CA264_13065 0.28 -0.7 3,046,565 + CA264_13065 0.28 +0.4 3,046,568 + CA264_13065 0.28 -0.1 3,046,820 + CA264_13065 0.42 -2.0 3,046,820 + CA264_13065 0.42 -0.3 3,046,827 + CA264_13065 0.42 -0.4 3,046,829 + CA264_13065 0.42 +0.7 3,046,830 - CA264_13065 0.42 -0.3 3,046,910 - CA264_13065 0.46 +0.1 3,046,910 - CA264_13065 0.46 +0.3
Or see this region's nucleotide sequence