Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_11150

Experiment: m.b. Paraquat dichloride 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_11145 and CA264_11150 are separated by 24 nucleotidesCA264_11150 and CA264_11155 are separated by 215 nucleotides CA264_11145: CA264_11145 - maltose alpha-D-glucosyltransferase, at 2,574,892 to 2,578,227 _11145 CA264_11150: CA264_11150 - alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase, at 2,578,252 to 2,580,273 _11150 CA264_11155: CA264_11155 - malto-oligosyltrehalose trehalohydrolase, at 2,580,489 to 2,582,339 _11155 Position (kb) 2578 2579 2580 2581Strain fitness (log2 ratio) -3 -2 -1 0 1at 2577.378 kb on + strand, within CA264_11145at 2577.379 kb on - strand, within CA264_11145at 2577.407 kb on + strand, within CA264_11145at 2577.498 kb on - strand, within CA264_11145at 2577.587 kb on + strand, within CA264_11145at 2577.588 kb on - strand, within CA264_11145at 2577.648 kb on + strand, within CA264_11145at 2577.648 kb on + strand, within CA264_11145at 2577.649 kb on - strand, within CA264_11145at 2577.722 kb on + strand, within CA264_11145at 2577.764 kb on + strand, within CA264_11145at 2577.764 kb on + strand, within CA264_11145at 2577.765 kb on - strand, within CA264_11145at 2577.765 kb on - strand, within CA264_11145at 2577.795 kb on - strand, within CA264_11145at 2577.795 kb on - strand, within CA264_11145at 2577.821 kb on + strand, within CA264_11145at 2577.822 kb on - strand, within CA264_11145at 2577.822 kb on - strand, within CA264_11145at 2577.838 kb on - strand, within CA264_11145at 2577.891 kb on + strand, within CA264_11145at 2577.891 kb on + strand, within CA264_11145at 2577.934 kb on - strandat 2577.977 kb on + strandat 2577.995 kb on - strandat 2577.999 kb on - strandat 2578.014 kb on - strandat 2578.041 kb on - strandat 2578.067 kb on - strandat 2578.072 kb on + strandat 2578.153 kb on + strandat 2578.153 kb on + strandat 2578.155 kb on + strandat 2578.155 kb on + strandat 2578.167 kb on - strandat 2578.171 kb on - strandat 2578.171 kb on - strandat 2578.183 kb on - strandat 2578.185 kb on - strandat 2578.185 kb on - strandat 2578.228 kb on - strandat 2578.228 kb on - strandat 2578.372 kb on + strandat 2578.372 kb on + strandat 2578.376 kb on + strandat 2578.404 kb on + strandat 2578.433 kb on + strandat 2578.433 kb on + strandat 2578.433 kb on + strandat 2578.433 kb on + strandat 2578.434 kb on - strandat 2578.531 kb on - strand, within CA264_11150at 2578.608 kb on + strand, within CA264_11150at 2578.627 kb on + strand, within CA264_11150at 2578.653 kb on + strand, within CA264_11150at 2578.706 kb on + strand, within CA264_11150at 2578.721 kb on + strand, within CA264_11150at 2578.721 kb on + strand, within CA264_11150at 2578.722 kb on - strand, within CA264_11150at 2578.725 kb on - strand, within CA264_11150at 2578.725 kb on - strand, within CA264_11150at 2578.788 kb on - strand, within CA264_11150at 2578.881 kb on + strand, within CA264_11150at 2578.882 kb on - strand, within CA264_11150at 2578.882 kb on - strand, within CA264_11150at 2578.941 kb on - strand, within CA264_11150at 2578.979 kb on + strand, within CA264_11150at 2578.979 kb on + strand, within CA264_11150at 2578.980 kb on - strand, within CA264_11150at 2578.984 kb on - strand, within CA264_11150at 2578.986 kb on - strand, within CA264_11150at 2579.271 kb on - strand, within CA264_11150at 2579.298 kb on + strand, within CA264_11150at 2579.298 kb on + strand, within CA264_11150at 2579.299 kb on - strand, within CA264_11150at 2579.321 kb on - strand, within CA264_11150at 2579.324 kb on + strand, within CA264_11150at 2579.730 kb on - strand, within CA264_11150at 2579.978 kb on + strand, within CA264_11150at 2579.989 kb on + strand, within CA264_11150at 2580.008 kb on + strand, within CA264_11150at 2580.238 kb on + strandat 2580.239 kb on - strandat 2580.301 kb on + strandat 2580.305 kb on + strandat 2580.305 kb on + strandat 2580.306 kb on - strandat 2580.310 kb on - strandat 2580.310 kb on - strandat 2580.310 kb on - strandat 2580.310 kb on - strandat 2580.310 kb on - strandat 2580.319 kb on - strandat 2580.319 kb on - strandat 2580.323 kb on - strandat 2580.323 kb on - strandat 2580.334 kb on + strandat 2580.334 kb on + strandat 2580.353 kb on + strandat 2580.428 kb on - strandat 2580.442 kb on + strandat 2580.465 kb on - strandat 2580.465 kb on - strandat 2580.496 kb on + strandat 2580.496 kb on + strandat 2580.496 kb on + strandat 2580.496 kb on + strandat 2580.496 kb on + strandat 2580.496 kb on + strandat 2580.497 kb on - strandat 2580.497 kb on - strandat 2580.497 kb on - strandat 2580.497 kb on - strandat 2580.508 kb on + strandat 2580.509 kb on - strandat 2580.509 kb on - strandat 2580.509 kb on - strandat 2580.605 kb on - strandat 2580.678 kb on + strand, within CA264_11155at 2580.678 kb on + strand, within CA264_11155at 2580.766 kb on + strand, within CA264_11155at 2580.766 kb on + strand, within CA264_11155at 2580.766 kb on + strand, within CA264_11155at 2580.767 kb on - strand, within CA264_11155at 2580.767 kb on - strand, within CA264_11155at 2580.767 kb on - strand, within CA264_11155at 2580.826 kb on - strand, within CA264_11155at 2580.835 kb on - strand, within CA264_11155at 2580.881 kb on + strand, within CA264_11155at 2580.975 kb on + strand, within CA264_11155at 2581.089 kb on + strand, within CA264_11155at 2581.138 kb on - strand, within CA264_11155at 2581.153 kb on - strand, within CA264_11155at 2581.154 kb on + strand, within CA264_11155at 2581.154 kb on + strand, within CA264_11155

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml
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2,577,378 + CA264_11145 0.75 -0.9
2,577,379 - CA264_11145 0.75 +0.0
2,577,407 + CA264_11145 0.75 +0.5
2,577,498 - CA264_11145 0.78 -0.7
2,577,587 + CA264_11145 0.81 -0.0
2,577,588 - CA264_11145 0.81 -0.2
2,577,648 + CA264_11145 0.83 +1.5
2,577,648 + CA264_11145 0.83 -1.7
2,577,649 - CA264_11145 0.83 +0.2
2,577,722 + CA264_11145 0.85 -0.6
2,577,764 + CA264_11145 0.86 +0.0
2,577,764 + CA264_11145 0.86 +0.7
2,577,765 - CA264_11145 0.86 -0.3
2,577,765 - CA264_11145 0.86 +0.3
2,577,795 - CA264_11145 0.87 -0.1
2,577,795 - CA264_11145 0.87 -0.5
2,577,821 + CA264_11145 0.88 +0.2
2,577,822 - CA264_11145 0.88 -0.3
2,577,822 - CA264_11145 0.88 +0.1
2,577,838 - CA264_11145 0.88 -0.6
2,577,891 + CA264_11145 0.90 +0.8
2,577,891 + CA264_11145 0.90 -0.9
2,577,934 - -0.4
2,577,977 + -0.4
2,577,995 - +0.2
2,577,999 - -0.5
2,578,014 - +0.2
2,578,041 - +1.0
2,578,067 - -0.2
2,578,072 + -0.4
2,578,153 + +0.1
2,578,153 + -0.8
2,578,155 + -0.5
2,578,155 + +0.7
2,578,167 - +0.3
2,578,171 - -0.4
2,578,171 - -0.2
2,578,183 - -0.4
2,578,185 - -0.5
2,578,185 - -0.4
2,578,228 - +0.2
2,578,228 - -0.0
2,578,372 + -0.0
2,578,372 + -1.8
2,578,376 + +0.0
2,578,404 + -1.7
2,578,433 + -1.1
2,578,433 + -0.1
2,578,433 + -0.4
2,578,433 + -1.1
2,578,434 - +1.7
2,578,531 - CA264_11150 0.14 -0.2
2,578,608 + CA264_11150 0.18 -0.5
2,578,627 + CA264_11150 0.19 -0.5
2,578,653 + CA264_11150 0.20 -0.3
2,578,706 + CA264_11150 0.22 +1.0
2,578,721 + CA264_11150 0.23 -0.5
2,578,721 + CA264_11150 0.23 -0.4
2,578,722 - CA264_11150 0.23 +0.2
2,578,725 - CA264_11150 0.23 -0.5
2,578,725 - CA264_11150 0.23 +0.5
2,578,788 - CA264_11150 0.27 -0.4
2,578,881 + CA264_11150 0.31 +0.6
2,578,882 - CA264_11150 0.31 -0.6
2,578,882 - CA264_11150 0.31 +0.9
2,578,941 - CA264_11150 0.34 -0.3
2,578,979 + CA264_11150 0.36 +0.2
2,578,979 + CA264_11150 0.36 -0.4
2,578,980 - CA264_11150 0.36 +0.2
2,578,984 - CA264_11150 0.36 +0.3
2,578,986 - CA264_11150 0.36 -0.2
2,579,271 - CA264_11150 0.50 -0.6
2,579,298 + CA264_11150 0.52 -0.2
2,579,298 + CA264_11150 0.52 -0.3
2,579,299 - CA264_11150 0.52 -1.0
2,579,321 - CA264_11150 0.53 -0.8
2,579,324 + CA264_11150 0.53 -1.0
2,579,730 - CA264_11150 0.73 -0.3
2,579,978 + CA264_11150 0.85 -0.8
2,579,989 + CA264_11150 0.86 +1.0
2,580,008 + CA264_11150 0.87 -0.3
2,580,238 + +0.5
2,580,239 - +0.2
2,580,301 + +0.9
2,580,305 + +0.0
2,580,305 + +0.4
2,580,306 - -0.2
2,580,310 - -0.5
2,580,310 - +1.2
2,580,310 - +0.6
2,580,310 - -0.2
2,580,310 - +0.0
2,580,319 - +1.0
2,580,319 - +0.1
2,580,323 - -0.1
2,580,323 - -0.3
2,580,334 + +0.2
2,580,334 + -1.1
2,580,353 + +0.6
2,580,428 - -1.1
2,580,442 + +0.1
2,580,465 - +0.2
2,580,465 - -1.8
2,580,496 + -0.1
2,580,496 + +0.0
2,580,496 + -0.5
2,580,496 + -0.6
2,580,496 + -1.6
2,580,496 + -1.7
2,580,497 - -0.0
2,580,497 - -0.9
2,580,497 - -2.9
2,580,497 - -0.7
2,580,508 + +1.1
2,580,509 - -1.1
2,580,509 - -0.7
2,580,509 - -0.7
2,580,605 - -1.0
2,580,678 + CA264_11155 0.10 +0.1
2,580,678 + CA264_11155 0.10 +0.4
2,580,766 + CA264_11155 0.15 -0.1
2,580,766 + CA264_11155 0.15 -1.0
2,580,766 + CA264_11155 0.15 +0.1
2,580,767 - CA264_11155 0.15 -0.1
2,580,767 - CA264_11155 0.15 -0.1
2,580,767 - CA264_11155 0.15 -0.6
2,580,826 - CA264_11155 0.18 -0.5
2,580,835 - CA264_11155 0.19 +0.3
2,580,881 + CA264_11155 0.21 -1.5
2,580,975 + CA264_11155 0.26 -0.1
2,581,089 + CA264_11155 0.32 -0.5
2,581,138 - CA264_11155 0.35 +0.3
2,581,153 - CA264_11155 0.36 -0.3
2,581,154 + CA264_11155 0.36 -2.6
2,581,154 + CA264_11155 0.36 -0.3

Or see this region's nucleotide sequence