Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_10505

Experiment: m.b. Paraquat dichloride 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_10500 and CA264_10505 overlap by 4 nucleotidesCA264_10505 and CA264_10510 overlap by 4 nucleotidesCA264_10510 and CA264_10515 are separated by 332 nucleotides CA264_10500: CA264_10500 - aldehyde oxidase, at 2,434,302 to 2,436,521 _10500 CA264_10505: CA264_10505 - FAD-binding molybdopterin dehydrogenase, at 2,436,518 to 2,437,513 _10505 CA264_10510: CA264_10510 - (2Fe-2S)-binding protein, at 2,437,510 to 2,438,010 _10510 CA264_10515: CA264_10515 - anion permease, at 2,438,343 to 2,439,101 _10515 Position (kb) 2436 2437 2438Strain fitness (log2 ratio) -1 0 1 2at 2435.561 kb on + strand, within CA264_10500at 2435.634 kb on - strand, within CA264_10500at 2435.866 kb on + strand, within CA264_10500at 2435.866 kb on + strand, within CA264_10500at 2435.866 kb on + strand, within CA264_10500at 2435.867 kb on - strand, within CA264_10500at 2435.867 kb on - strand, within CA264_10500at 2435.867 kb on - strand, within CA264_10500at 2435.897 kb on + strand, within CA264_10500at 2435.898 kb on - strand, within CA264_10500at 2435.898 kb on - strand, within CA264_10500at 2435.898 kb on - strand, within CA264_10500at 2435.903 kb on - strand, within CA264_10500at 2435.915 kb on + strand, within CA264_10500at 2436.065 kb on + strand, within CA264_10500at 2436.066 kb on - strand, within CA264_10500at 2436.082 kb on + strand, within CA264_10500at 2436.082 kb on + strand, within CA264_10500at 2436.082 kb on + strand, within CA264_10500at 2436.083 kb on - strand, within CA264_10500at 2436.083 kb on - strand, within CA264_10500at 2436.083 kb on - strand, within CA264_10500at 2436.083 kb on - strand, within CA264_10500at 2436.161 kb on - strand, within CA264_10500at 2436.277 kb on + strand, within CA264_10500at 2436.278 kb on - strand, within CA264_10500at 2436.298 kb on + strand, within CA264_10500at 2436.299 kb on - strand, within CA264_10500at 2436.366 kb on + strandat 2436.367 kb on - strandat 2436.369 kb on - strandat 2436.402 kb on + strandat 2436.449 kb on - strandat 2436.538 kb on + strandat 2436.538 kb on + strandat 2436.540 kb on + strandat 2436.627 kb on + strand, within CA264_10505at 2436.805 kb on - strand, within CA264_10505at 2436.829 kb on + strand, within CA264_10505at 2436.831 kb on + strand, within CA264_10505at 2436.831 kb on + strand, within CA264_10505at 2436.831 kb on + strand, within CA264_10505at 2436.837 kb on + strand, within CA264_10505at 2436.838 kb on - strand, within CA264_10505at 2436.838 kb on - strand, within CA264_10505at 2436.838 kb on - strand, within CA264_10505at 2436.838 kb on - strand, within CA264_10505at 2436.980 kb on + strand, within CA264_10505at 2437.083 kb on + strand, within CA264_10505at 2437.127 kb on - strand, within CA264_10505at 2437.127 kb on - strand, within CA264_10505at 2437.198 kb on + strand, within CA264_10505at 2437.263 kb on - strand, within CA264_10505at 2437.263 kb on - strand, within CA264_10505at 2437.276 kb on - strand, within CA264_10505at 2437.387 kb on + strand, within CA264_10505at 2437.495 kb on + strandat 2437.497 kb on + strandat 2437.497 kb on + strandat 2437.497 kb on + strandat 2437.497 kb on + strandat 2437.497 kb on + strandat 2437.498 kb on - strandat 2437.501 kb on + strandat 2437.552 kb on + strandat 2437.561 kb on + strand, within CA264_10510at 2437.562 kb on - strand, within CA264_10510at 2437.562 kb on - strand, within CA264_10510at 2437.565 kb on + strand, within CA264_10510at 2437.566 kb on - strand, within CA264_10510at 2437.607 kb on - strand, within CA264_10510at 2437.607 kb on - strand, within CA264_10510at 2437.608 kb on + strand, within CA264_10510at 2437.660 kb on + strand, within CA264_10510at 2437.660 kb on + strand, within CA264_10510at 2437.661 kb on - strand, within CA264_10510at 2437.675 kb on - strand, within CA264_10510at 2437.729 kb on + strand, within CA264_10510at 2437.730 kb on - strand, within CA264_10510at 2437.730 kb on - strand, within CA264_10510at 2437.730 kb on - strand, within CA264_10510at 2437.987 kb on + strandat 2437.987 kb on + strandat 2437.988 kb on - strandat 2438.190 kb on - strandat 2438.190 kb on - strandat 2438.241 kb on - strandat 2438.257 kb on - strandat 2438.267 kb on - strandat 2438.307 kb on + strandat 2438.307 kb on + strandat 2438.307 kb on + strandat 2438.467 kb on + strand, within CA264_10515

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml
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2,435,561 + CA264_10500 0.57 +0.7
2,435,634 - CA264_10500 0.60 +0.7
2,435,866 + CA264_10500 0.70 +2.0
2,435,866 + CA264_10500 0.70 -0.2
2,435,866 + CA264_10500 0.70 -0.7
2,435,867 - CA264_10500 0.70 +0.6
2,435,867 - CA264_10500 0.70 +0.4
2,435,867 - CA264_10500 0.70 -0.1
2,435,897 + CA264_10500 0.72 -0.4
2,435,898 - CA264_10500 0.72 -0.1
2,435,898 - CA264_10500 0.72 +0.3
2,435,898 - CA264_10500 0.72 +0.1
2,435,903 - CA264_10500 0.72 -0.1
2,435,915 + CA264_10500 0.73 +1.0
2,436,065 + CA264_10500 0.79 -0.9
2,436,066 - CA264_10500 0.79 +0.1
2,436,082 + CA264_10500 0.80 -0.3
2,436,082 + CA264_10500 0.80 -0.6
2,436,082 + CA264_10500 0.80 -0.3
2,436,083 - CA264_10500 0.80 +0.2
2,436,083 - CA264_10500 0.80 -0.4
2,436,083 - CA264_10500 0.80 +0.2
2,436,083 - CA264_10500 0.80 +0.3
2,436,161 - CA264_10500 0.84 +0.1
2,436,277 + CA264_10500 0.89 -0.1
2,436,278 - CA264_10500 0.89 -0.0
2,436,298 + CA264_10500 0.90 +0.2
2,436,299 - CA264_10500 0.90 -0.9
2,436,366 + +0.4
2,436,367 - +0.6
2,436,369 - -0.2
2,436,402 + -0.7
2,436,449 - +0.6
2,436,538 + -0.3
2,436,538 + +0.4
2,436,540 + -1.4
2,436,627 + CA264_10505 0.11 -0.4
2,436,805 - CA264_10505 0.29 -0.3
2,436,829 + CA264_10505 0.31 -0.9
2,436,831 + CA264_10505 0.31 -0.6
2,436,831 + CA264_10505 0.31 -0.9
2,436,831 + CA264_10505 0.31 -0.1
2,436,837 + CA264_10505 0.32 -0.4
2,436,838 - CA264_10505 0.32 -0.4
2,436,838 - CA264_10505 0.32 -0.9
2,436,838 - CA264_10505 0.32 +1.0
2,436,838 - CA264_10505 0.32 -0.3
2,436,980 + CA264_10505 0.46 -0.5
2,437,083 + CA264_10505 0.57 -0.9
2,437,127 - CA264_10505 0.61 +0.0
2,437,127 - CA264_10505 0.61 -0.0
2,437,198 + CA264_10505 0.68 -0.6
2,437,263 - CA264_10505 0.75 +0.5
2,437,263 - CA264_10505 0.75 -0.7
2,437,276 - CA264_10505 0.76 -0.4
2,437,387 + CA264_10505 0.87 +0.1
2,437,495 + -0.9
2,437,497 + +1.6
2,437,497 + +0.3
2,437,497 + +0.4
2,437,497 + -0.3
2,437,497 + -0.6
2,437,498 - -0.6
2,437,501 + +1.1
2,437,552 + -0.5
2,437,561 + CA264_10510 0.10 +1.3
2,437,562 - CA264_10510 0.10 -1.0
2,437,562 - CA264_10510 0.10 +0.8
2,437,565 + CA264_10510 0.11 -0.2
2,437,566 - CA264_10510 0.11 +0.3
2,437,607 - CA264_10510 0.19 +0.3
2,437,607 - CA264_10510 0.19 +0.5
2,437,608 + CA264_10510 0.20 +0.1
2,437,660 + CA264_10510 0.30 -0.8
2,437,660 + CA264_10510 0.30 -0.2
2,437,661 - CA264_10510 0.30 +2.0
2,437,675 - CA264_10510 0.33 -0.2
2,437,729 + CA264_10510 0.44 -0.5
2,437,730 - CA264_10510 0.44 -0.8
2,437,730 - CA264_10510 0.44 -0.1
2,437,730 - CA264_10510 0.44 +0.1
2,437,987 + +0.2
2,437,987 + +0.3
2,437,988 - -0.5
2,438,190 - +0.1
2,438,190 - -0.2
2,438,241 - -0.2
2,438,257 - -0.0
2,438,267 - -0.3
2,438,307 + +0.8
2,438,307 + +0.2
2,438,307 + -0.9
2,438,467 + CA264_10515 0.16 -1.3

Or see this region's nucleotide sequence