Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_08965 and CA264_08970 are separated by 213 nucleotides CA264_08970 and CA264_08975 are separated by 137 nucleotides
CA264_08965: CA264_08965 - ketoacyl reductase, at 2,093,491 to 2,094,306
_08965
CA264_08970: CA264_08970 - glycoside hydrolase family 15, at 2,094,520 to 2,096,244
_08970
CA264_08975: CA264_08975 - hypothetical protein, at 2,096,382 to 2,097,305
_08975
Position (kb)
2094
2095
2096
2097 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2093.525 kb on - strand at 2093.570 kb on - strand at 2093.617 kb on + strand, within CA264_08965 at 2093.668 kb on + strand, within CA264_08965 at 2093.668 kb on + strand, within CA264_08965 at 2093.751 kb on + strand, within CA264_08965 at 2093.775 kb on - strand, within CA264_08965 at 2093.775 kb on - strand, within CA264_08965 at 2093.829 kb on - strand, within CA264_08965 at 2093.935 kb on + strand, within CA264_08965 at 2093.936 kb on - strand, within CA264_08965 at 2093.953 kb on + strand, within CA264_08965 at 2094.027 kb on - strand, within CA264_08965 at 2094.037 kb on + strand, within CA264_08965 at 2094.037 kb on + strand, within CA264_08965 at 2094.115 kb on + strand, within CA264_08965 at 2094.298 kb on + strand at 2094.298 kb on + strand at 2094.299 kb on - strand at 2094.416 kb on + strand at 2094.484 kb on + strand at 2094.551 kb on + strand at 2094.556 kb on + strand at 2094.779 kb on + strand, within CA264_08970 at 2094.818 kb on + strand, within CA264_08970 at 2094.939 kb on - strand, within CA264_08970 at 2094.964 kb on - strand, within CA264_08970 at 2095.069 kb on + strand, within CA264_08970 at 2095.077 kb on + strand, within CA264_08970 at 2095.077 kb on + strand, within CA264_08970 at 2095.085 kb on + strand, within CA264_08970 at 2095.085 kb on + strand, within CA264_08970 at 2095.086 kb on - strand, within CA264_08970 at 2095.086 kb on - strand, within CA264_08970 at 2095.086 kb on - strand, within CA264_08970 at 2095.161 kb on - strand, within CA264_08970 at 2095.273 kb on + strand, within CA264_08970 at 2095.274 kb on - strand, within CA264_08970 at 2095.298 kb on + strand, within CA264_08970 at 2095.502 kb on + strand, within CA264_08970 at 2095.502 kb on + strand, within CA264_08970 at 2095.554 kb on + strand, within CA264_08970 at 2095.634 kb on + strand, within CA264_08970 at 2095.710 kb on + strand, within CA264_08970 at 2095.828 kb on + strand, within CA264_08970 at 2095.829 kb on - strand, within CA264_08970 at 2095.834 kb on + strand, within CA264_08970 at 2095.898 kb on - strand, within CA264_08970 at 2095.970 kb on + strand, within CA264_08970 at 2095.970 kb on + strand, within CA264_08970 at 2095.970 kb on + strand, within CA264_08970 at 2095.970 kb on + strand, within CA264_08970 at 2095.970 kb on + strand, within CA264_08970 at 2096.151 kb on - strand at 2096.158 kb on + strand at 2096.178 kb on + strand at 2096.178 kb on + strand at 2096.181 kb on - strand at 2096.181 kb on - strand at 2096.250 kb on - strand at 2096.285 kb on - strand at 2096.287 kb on - strand at 2096.287 kb on - strand at 2096.325 kb on + strand at 2096.374 kb on + strand at 2096.383 kb on + strand at 2096.384 kb on - strand at 2096.394 kb on + strand at 2096.509 kb on - strand, within CA264_08975 at 2096.583 kb on - strand, within CA264_08975 at 2096.584 kb on + strand, within CA264_08975 at 2096.850 kb on - strand, within CA264_08975 at 2096.852 kb on - strand, within CA264_08975 at 2096.937 kb on - strand, within CA264_08975 at 2096.941 kb on + strand, within CA264_08975 at 2096.941 kb on + strand, within CA264_08975 at 2096.941 kb on + strand, within CA264_08975 at 2096.951 kb on + strand, within CA264_08975 at 2096.974 kb on + strand, within CA264_08975 at 2096.974 kb on + strand, within CA264_08975 at 2096.981 kb on - strand, within CA264_08975 at 2097.096 kb on + strand, within CA264_08975 at 2097.158 kb on - strand, within CA264_08975 at 2097.158 kb on - strand, within CA264_08975 at 2097.184 kb on + strand, within CA264_08975 at 2097.191 kb on - strand, within CA264_08975 at 2097.214 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 2,093,525 - +0.2 2,093,570 - +0.2 2,093,617 + CA264_08965 0.15 +0.6 2,093,668 + CA264_08965 0.22 -0.3 2,093,668 + CA264_08965 0.22 -0.1 2,093,751 + CA264_08965 0.32 -0.6 2,093,775 - CA264_08965 0.35 +2.1 2,093,775 - CA264_08965 0.35 +0.0 2,093,829 - CA264_08965 0.41 -0.0 2,093,935 + CA264_08965 0.54 -1.4 2,093,936 - CA264_08965 0.55 +1.9 2,093,953 + CA264_08965 0.57 -1.2 2,094,027 - CA264_08965 0.66 -0.7 2,094,037 + CA264_08965 0.67 -0.2 2,094,037 + CA264_08965 0.67 -0.4 2,094,115 + CA264_08965 0.76 -0.3 2,094,298 + -1.2 2,094,298 + -0.2 2,094,299 - -0.9 2,094,416 + +0.5 2,094,484 + -0.6 2,094,551 + -0.4 2,094,556 + -0.0 2,094,779 + CA264_08970 0.15 -1.0 2,094,818 + CA264_08970 0.17 -0.9 2,094,939 - CA264_08970 0.24 -0.1 2,094,964 - CA264_08970 0.26 -0.4 2,095,069 + CA264_08970 0.32 -1.5 2,095,077 + CA264_08970 0.32 -0.0 2,095,077 + CA264_08970 0.32 -0.5 2,095,085 + CA264_08970 0.33 +1.7 2,095,085 + CA264_08970 0.33 -0.4 2,095,086 - CA264_08970 0.33 -0.5 2,095,086 - CA264_08970 0.33 -0.1 2,095,086 - CA264_08970 0.33 +0.3 2,095,161 - CA264_08970 0.37 -0.3 2,095,273 + CA264_08970 0.44 -0.2 2,095,274 - CA264_08970 0.44 -0.9 2,095,298 + CA264_08970 0.45 -0.3 2,095,502 + CA264_08970 0.57 +0.1 2,095,502 + CA264_08970 0.57 -2.2 2,095,554 + CA264_08970 0.60 +0.5 2,095,634 + CA264_08970 0.65 -0.8 2,095,710 + CA264_08970 0.69 +0.6 2,095,828 + CA264_08970 0.76 +0.2 2,095,829 - CA264_08970 0.76 -0.8 2,095,834 + CA264_08970 0.76 -0.2 2,095,898 - CA264_08970 0.80 +0.1 2,095,970 + CA264_08970 0.84 +0.2 2,095,970 + CA264_08970 0.84 -0.9 2,095,970 + CA264_08970 0.84 -1.1 2,095,970 + CA264_08970 0.84 -0.4 2,095,970 + CA264_08970 0.84 -0.8 2,096,151 - +0.4 2,096,158 + -0.1 2,096,178 + +0.5 2,096,178 + -0.4 2,096,181 - -0.9 2,096,181 - -0.7 2,096,250 - -0.5 2,096,285 - -0.5 2,096,287 - -0.2 2,096,287 - -1.4 2,096,325 + +0.9 2,096,374 + -0.1 2,096,383 + -0.3 2,096,384 - +0.7 2,096,394 + -0.2 2,096,509 - CA264_08975 0.14 -0.2 2,096,583 - CA264_08975 0.22 -1.0 2,096,584 + CA264_08975 0.22 +0.2 2,096,850 - CA264_08975 0.51 -0.4 2,096,852 - CA264_08975 0.51 +1.7 2,096,937 - CA264_08975 0.60 -0.4 2,096,941 + CA264_08975 0.60 +1.0 2,096,941 + CA264_08975 0.60 +0.3 2,096,941 + CA264_08975 0.60 +0.4 2,096,951 + CA264_08975 0.62 +0.5 2,096,974 + CA264_08975 0.64 -1.1 2,096,974 + CA264_08975 0.64 +0.1 2,096,981 - CA264_08975 0.65 +0.0 2,097,096 + CA264_08975 0.77 +0.2 2,097,158 - CA264_08975 0.84 +0.1 2,097,158 - CA264_08975 0.84 +0.5 2,097,184 + CA264_08975 0.87 +1.2 2,097,191 - CA264_08975 0.88 -0.4 2,097,214 - -0.7
Or see this region's nucleotide sequence