Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07505

Experiment: m.b. Paraquat dichloride 0.025 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_07500 and CA264_07505 are separated by 342 nucleotidesCA264_07505 and CA264_07510 are separated by 57 nucleotides CA264_07500: CA264_07500 - T9SS C-terminal target domain-containing protein, at 1,735,831 to 1,738,479 _07500 CA264_07505: CA264_07505 - GNAT family N-acetyltransferase, at 1,738,822 to 1,739,307 _07505 CA264_07510: CA264_07510 - DUF5103 domain-containing protein, at 1,739,365 to 1,740,675 _07510 Position (kb) 1738 1739 1740Strain fitness (log2 ratio) -2 -1 0 1 2at 1737.895 kb on - strand, within CA264_07500at 1737.932 kb on + strand, within CA264_07500at 1737.970 kb on + strand, within CA264_07500at 1737.970 kb on + strand, within CA264_07500at 1737.970 kb on + strand, within CA264_07500at 1737.970 kb on + strand, within CA264_07500at 1737.970 kb on + strand, within CA264_07500at 1737.970 kb on + strand, within CA264_07500at 1737.970 kb on + strand, within CA264_07500at 1737.970 kb on + strand, within CA264_07500at 1737.971 kb on - strand, within CA264_07500at 1737.971 kb on - strand, within CA264_07500at 1737.971 kb on - strand, within CA264_07500at 1737.971 kb on - strand, within CA264_07500at 1737.971 kb on - strand, within CA264_07500at 1737.973 kb on - strand, within CA264_07500at 1737.995 kb on + strand, within CA264_07500at 1738.033 kb on - strand, within CA264_07500at 1738.061 kb on - strand, within CA264_07500at 1738.078 kb on - strand, within CA264_07500at 1738.078 kb on - strand, within CA264_07500at 1738.113 kb on - strand, within CA264_07500at 1738.129 kb on - strand, within CA264_07500at 1738.130 kb on + strand, within CA264_07500at 1738.130 kb on + strand, within CA264_07500at 1738.131 kb on - strand, within CA264_07500at 1738.131 kb on - strand, within CA264_07500at 1738.131 kb on - strand, within CA264_07500at 1738.132 kb on + strand, within CA264_07500at 1738.132 kb on + strand, within CA264_07500at 1738.142 kb on - strand, within CA264_07500at 1738.142 kb on - strand, within CA264_07500at 1738.143 kb on + strand, within CA264_07500at 1738.144 kb on - strand, within CA264_07500at 1738.353 kb on - strandat 1738.353 kb on - strandat 1738.378 kb on - strandat 1738.398 kb on - strandat 1738.398 kb on - strandat 1738.420 kb on + strandat 1738.421 kb on - strandat 1738.438 kb on - strandat 1738.467 kb on - strandat 1738.469 kb on + strandat 1738.469 kb on + strandat 1738.470 kb on - strandat 1738.470 kb on - strandat 1738.488 kb on - strandat 1738.532 kb on + strandat 1738.542 kb on + strandat 1738.542 kb on + strandat 1738.545 kb on + strandat 1738.548 kb on + strandat 1738.552 kb on + strandat 1738.638 kb on + strandat 1738.640 kb on + strandat 1738.641 kb on - strandat 1738.644 kb on + strandat 1738.645 kb on - strandat 1738.645 kb on - strandat 1738.676 kb on + strandat 1738.677 kb on - strandat 1738.733 kb on - strandat 1738.734 kb on + strandat 1738.734 kb on + strandat 1738.734 kb on + strandat 1738.810 kb on + strandat 1738.817 kb on - strandat 1738.824 kb on - strandat 1738.825 kb on + strandat 1738.825 kb on + strandat 1738.826 kb on - strandat 1738.830 kb on + strandat 1738.881 kb on + strand, within CA264_07505at 1738.881 kb on + strand, within CA264_07505at 1738.882 kb on - strand, within CA264_07505at 1738.902 kb on - strand, within CA264_07505at 1738.968 kb on + strand, within CA264_07505at 1738.969 kb on - strand, within CA264_07505at 1738.969 kb on - strand, within CA264_07505at 1739.068 kb on + strand, within CA264_07505at 1739.073 kb on + strand, within CA264_07505at 1739.083 kb on + strand, within CA264_07505at 1739.083 kb on + strand, within CA264_07505at 1739.084 kb on - strand, within CA264_07505at 1739.084 kb on - strand, within CA264_07505at 1739.084 kb on - strand, within CA264_07505at 1739.084 kb on - strand, within CA264_07505at 1739.084 kb on - strand, within CA264_07505at 1739.085 kb on + strand, within CA264_07505at 1739.085 kb on + strand, within CA264_07505at 1739.086 kb on - strand, within CA264_07505at 1739.086 kb on - strand, within CA264_07505at 1739.100 kb on + strand, within CA264_07505at 1739.135 kb on - strand, within CA264_07505at 1739.186 kb on + strand, within CA264_07505at 1739.186 kb on + strand, within CA264_07505at 1739.187 kb on - strand, within CA264_07505at 1739.265 kb on + strandat 1739.293 kb on + strandat 1739.294 kb on - strandat 1739.361 kb on - strandat 1739.435 kb on + strandat 1739.436 kb on - strandat 1739.436 kb on - strandat 1739.450 kb on + strandat 1739.451 kb on - strandat 1739.486 kb on + strandat 1739.487 kb on - strandat 1739.491 kb on - strandat 1739.523 kb on + strand, within CA264_07510at 1739.523 kb on + strand, within CA264_07510at 1739.525 kb on + strand, within CA264_07510at 1739.525 kb on + strand, within CA264_07510at 1739.525 kb on + strand, within CA264_07510at 1739.525 kb on + strand, within CA264_07510at 1739.526 kb on - strand, within CA264_07510at 1739.526 kb on - strand, within CA264_07510at 1739.526 kb on - strand, within CA264_07510at 1739.526 kb on - strand, within CA264_07510at 1739.528 kb on + strand, within CA264_07510at 1739.528 kb on + strand, within CA264_07510at 1739.528 kb on + strand, within CA264_07510at 1739.529 kb on - strand, within CA264_07510at 1739.531 kb on + strand, within CA264_07510at 1739.531 kb on + strand, within CA264_07510at 1739.531 kb on + strand, within CA264_07510at 1739.531 kb on + strand, within CA264_07510at 1739.532 kb on - strand, within CA264_07510at 1739.535 kb on + strand, within CA264_07510at 1739.535 kb on + strand, within CA264_07510at 1739.536 kb on - strand, within CA264_07510at 1739.536 kb on - strand, within CA264_07510at 1739.536 kb on - strand, within CA264_07510at 1739.536 kb on - strand, within CA264_07510at 1739.538 kb on - strand, within CA264_07510at 1739.538 kb on - strand, within CA264_07510at 1739.572 kb on + strand, within CA264_07510at 1739.611 kb on + strand, within CA264_07510at 1739.629 kb on - strand, within CA264_07510at 1739.645 kb on + strand, within CA264_07510at 1739.646 kb on - strand, within CA264_07510at 1739.678 kb on - strand, within CA264_07510at 1739.699 kb on + strand, within CA264_07510at 1739.700 kb on - strand, within CA264_07510at 1739.745 kb on + strand, within CA264_07510at 1739.844 kb on + strand, within CA264_07510at 1739.844 kb on + strand, within CA264_07510at 1739.845 kb on - strand, within CA264_07510at 1739.866 kb on - strand, within CA264_07510at 1739.907 kb on - strand, within CA264_07510at 1739.914 kb on - strand, within CA264_07510at 1739.968 kb on + strand, within CA264_07510at 1739.968 kb on + strand, within CA264_07510at 1739.968 kb on + strand, within CA264_07510at 1739.968 kb on + strand, within CA264_07510at 1739.968 kb on + strand, within CA264_07510at 1739.968 kb on + strand, within CA264_07510at 1739.968 kb on + strand, within CA264_07510at 1739.968 kb on + strand, within CA264_07510at 1739.969 kb on - strand, within CA264_07510at 1739.969 kb on - strand, within CA264_07510at 1739.969 kb on - strand, within CA264_07510at 1739.969 kb on - strand, within CA264_07510at 1739.969 kb on - strand, within CA264_07510at 1739.969 kb on - strand, within CA264_07510at 1739.969 kb on - strand, within CA264_07510at 1739.969 kb on - strand, within CA264_07510at 1739.970 kb on + strand, within CA264_07510at 1739.970 kb on + strand, within CA264_07510at 1739.972 kb on + strand, within CA264_07510at 1739.972 kb on + strand, within CA264_07510at 1739.972 kb on + strand, within CA264_07510at 1739.973 kb on - strand, within CA264_07510at 1739.973 kb on - strand, within CA264_07510at 1739.977 kb on - strand, within CA264_07510at 1739.990 kb on + strand, within CA264_07510at 1740.052 kb on + strand, within CA264_07510at 1740.063 kb on - strand, within CA264_07510at 1740.081 kb on + strand, within CA264_07510at 1740.241 kb on + strand, within CA264_07510at 1740.264 kb on - strand, within CA264_07510at 1740.272 kb on + strand, within CA264_07510at 1740.273 kb on - strand, within CA264_07510

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml
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1,737,895 - CA264_07500 0.78 -0.0
1,737,932 + CA264_07500 0.79 +0.3
1,737,970 + CA264_07500 0.81 +0.6
1,737,970 + CA264_07500 0.81 -0.5
1,737,970 + CA264_07500 0.81 -0.8
1,737,970 + CA264_07500 0.81 +1.0
1,737,970 + CA264_07500 0.81 +0.0
1,737,970 + CA264_07500 0.81 -0.2
1,737,970 + CA264_07500 0.81 -0.2
1,737,970 + CA264_07500 0.81 +0.4
1,737,971 - CA264_07500 0.81 -0.5
1,737,971 - CA264_07500 0.81 -0.0
1,737,971 - CA264_07500 0.81 +0.3
1,737,971 - CA264_07500 0.81 +0.3
1,737,971 - CA264_07500 0.81 +0.5
1,737,973 - CA264_07500 0.81 -0.2
1,737,995 + CA264_07500 0.82 +0.4
1,738,033 - CA264_07500 0.83 +0.4
1,738,061 - CA264_07500 0.84 -0.6
1,738,078 - CA264_07500 0.85 +0.8
1,738,078 - CA264_07500 0.85 -0.2
1,738,113 - CA264_07500 0.86 -0.3
1,738,129 - CA264_07500 0.87 +0.4
1,738,130 + CA264_07500 0.87 -1.2
1,738,130 + CA264_07500 0.87 -0.1
1,738,131 - CA264_07500 0.87 +0.1
1,738,131 - CA264_07500 0.87 -0.3
1,738,131 - CA264_07500 0.87 +0.3
1,738,132 + CA264_07500 0.87 +0.3
1,738,132 + CA264_07500 0.87 +0.0
1,738,142 - CA264_07500 0.87 -0.7
1,738,142 - CA264_07500 0.87 -0.1
1,738,143 + CA264_07500 0.87 -0.4
1,738,144 - CA264_07500 0.87 +0.5
1,738,353 - -0.1
1,738,353 - +0.5
1,738,378 - +0.2
1,738,398 - +0.1
1,738,398 - +0.4
1,738,420 + +0.7
1,738,421 - +1.1
1,738,438 - -0.3
1,738,467 - -0.7
1,738,469 + +0.3
1,738,469 + -0.5
1,738,470 - +0.4
1,738,470 - -1.3
1,738,488 - +2.0
1,738,532 + -0.4
1,738,542 + -1.1
1,738,542 + -0.1
1,738,545 + +0.4
1,738,548 + +0.4
1,738,552 + +0.7
1,738,638 + -0.0
1,738,640 + +0.1
1,738,641 - +1.0
1,738,644 + +0.1
1,738,645 - +0.9
1,738,645 - +0.7
1,738,676 + -0.7
1,738,677 - +0.2
1,738,733 - -0.4
1,738,734 + -0.4
1,738,734 + -0.5
1,738,734 + +0.2
1,738,810 + -0.1
1,738,817 - -0.6
1,738,824 - +0.4
1,738,825 + -0.3
1,738,825 + +0.5
1,738,826 - -1.6
1,738,830 + +0.3
1,738,881 + CA264_07505 0.12 +0.5
1,738,881 + CA264_07505 0.12 -1.1
1,738,882 - CA264_07505 0.12 +0.5
1,738,902 - CA264_07505 0.16 -0.2
1,738,968 + CA264_07505 0.30 +0.1
1,738,969 - CA264_07505 0.30 +0.6
1,738,969 - CA264_07505 0.30 +1.3
1,739,068 + CA264_07505 0.51 -0.5
1,739,073 + CA264_07505 0.52 -0.0
1,739,083 + CA264_07505 0.54 +0.1
1,739,083 + CA264_07505 0.54 -0.4
1,739,084 - CA264_07505 0.54 +0.3
1,739,084 - CA264_07505 0.54 -0.1
1,739,084 - CA264_07505 0.54 +0.0
1,739,084 - CA264_07505 0.54 +0.1
1,739,084 - CA264_07505 0.54 +0.0
1,739,085 + CA264_07505 0.54 -0.1
1,739,085 + CA264_07505 0.54 +0.6
1,739,086 - CA264_07505 0.54 +0.2
1,739,086 - CA264_07505 0.54 +0.8
1,739,100 + CA264_07505 0.57 +0.6
1,739,135 - CA264_07505 0.64 -0.2
1,739,186 + CA264_07505 0.75 -0.1
1,739,186 + CA264_07505 0.75 +0.4
1,739,187 - CA264_07505 0.75 -0.8
1,739,265 + -0.6
1,739,293 + -1.9
1,739,294 - +0.1
1,739,361 - +0.0
1,739,435 + -0.2
1,739,436 - +0.1
1,739,436 - -0.3
1,739,450 + +0.6
1,739,451 - +0.2
1,739,486 + -0.4
1,739,487 - +0.9
1,739,491 - +0.8
1,739,523 + CA264_07510 0.12 -0.9
1,739,523 + CA264_07510 0.12 +0.2
1,739,525 + CA264_07510 0.12 +0.6
1,739,525 + CA264_07510 0.12 +0.9
1,739,525 + CA264_07510 0.12 +0.0
1,739,525 + CA264_07510 0.12 -0.1
1,739,526 - CA264_07510 0.12 -1.5
1,739,526 - CA264_07510 0.12 +0.2
1,739,526 - CA264_07510 0.12 -0.1
1,739,526 - CA264_07510 0.12 +0.8
1,739,528 + CA264_07510 0.12 -0.3
1,739,528 + CA264_07510 0.12 -0.0
1,739,528 + CA264_07510 0.12 +0.1
1,739,529 - CA264_07510 0.13 -0.5
1,739,531 + CA264_07510 0.13 -0.3
1,739,531 + CA264_07510 0.13 -0.5
1,739,531 + CA264_07510 0.13 -1.4
1,739,531 + CA264_07510 0.13 -0.2
1,739,532 - CA264_07510 0.13 +0.0
1,739,535 + CA264_07510 0.13 +0.5
1,739,535 + CA264_07510 0.13 -0.1
1,739,536 - CA264_07510 0.13 -0.1
1,739,536 - CA264_07510 0.13 -0.0
1,739,536 - CA264_07510 0.13 -1.7
1,739,536 - CA264_07510 0.13 -0.1
1,739,538 - CA264_07510 0.13 -0.3
1,739,538 - CA264_07510 0.13 -0.2
1,739,572 + CA264_07510 0.16 -0.4
1,739,611 + CA264_07510 0.19 -0.0
1,739,629 - CA264_07510 0.20 -1.3
1,739,645 + CA264_07510 0.21 +0.2
1,739,646 - CA264_07510 0.21 +1.0
1,739,678 - CA264_07510 0.24 -0.5
1,739,699 + CA264_07510 0.25 -0.7
1,739,700 - CA264_07510 0.26 -0.8
1,739,745 + CA264_07510 0.29 -0.1
1,739,844 + CA264_07510 0.37 -0.3
1,739,844 + CA264_07510 0.37 -0.3
1,739,845 - CA264_07510 0.37 -2.1
1,739,866 - CA264_07510 0.38 -0.1
1,739,907 - CA264_07510 0.41 +0.5
1,739,914 - CA264_07510 0.42 -1.2
1,739,968 + CA264_07510 0.46 +0.3
1,739,968 + CA264_07510 0.46 -0.0
1,739,968 + CA264_07510 0.46 +0.1
1,739,968 + CA264_07510 0.46 +0.1
1,739,968 + CA264_07510 0.46 +1.1
1,739,968 + CA264_07510 0.46 +0.3
1,739,968 + CA264_07510 0.46 -0.7
1,739,968 + CA264_07510 0.46 +1.1
1,739,969 - CA264_07510 0.46 +0.3
1,739,969 - CA264_07510 0.46 -0.2
1,739,969 - CA264_07510 0.46 +1.4
1,739,969 - CA264_07510 0.46 -0.9
1,739,969 - CA264_07510 0.46 +0.4
1,739,969 - CA264_07510 0.46 +0.7
1,739,969 - CA264_07510 0.46 -0.9
1,739,969 - CA264_07510 0.46 -0.3
1,739,970 + CA264_07510 0.46 -0.0
1,739,970 + CA264_07510 0.46 +1.0
1,739,972 + CA264_07510 0.46 -0.9
1,739,972 + CA264_07510 0.46 -0.4
1,739,972 + CA264_07510 0.46 +0.4
1,739,973 - CA264_07510 0.46 -0.5
1,739,973 - CA264_07510 0.46 +0.3
1,739,977 - CA264_07510 0.47 +0.9
1,739,990 + CA264_07510 0.48 +0.4
1,740,052 + CA264_07510 0.52 -0.6
1,740,063 - CA264_07510 0.53 -0.5
1,740,081 + CA264_07510 0.55 -1.1
1,740,241 + CA264_07510 0.67 -0.1
1,740,264 - CA264_07510 0.69 -0.4
1,740,272 + CA264_07510 0.69 +0.5
1,740,273 - CA264_07510 0.69 +2.3

Or see this region's nucleotide sequence