Experiment: m.b. Paraquat dichloride 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_05005 and CA264_05010 are separated by 69 nucleotides CA264_05010 and CA264_05015 overlap by 2 nucleotides CA264_05015 and CA264_05020 are separated by 3 nucleotides CA264_05020 and CA264_05025 are separated by 124 nucleotides
CA264_05005: CA264_05005 - colicin receptor, at 1,161,370 to 1,163,796
_05005
CA264_05010: CA264_05010 - hypothetical protein, at 1,163,866 to 1,164,732
_05010
CA264_05015: CA264_05015 - hypothetical protein, at 1,164,731 to 1,164,955
_05015
CA264_05020: CA264_05020 - hypothetical protein, at 1,164,959 to 1,165,408
_05020
CA264_05025: CA264_05025 - ATP phosphoribosyltransferase, at 1,165,533 to 1,166,384
_05025
Position (kb)
1164
1165 Strain fitness (log2 ratio)
-1
0
1
2 at 1163.731 kb on - strand at 1163.735 kb on - strand at 1163.735 kb on - strand at 1163.859 kb on - strand at 1163.916 kb on - strand at 1163.922 kb on + strand at 1163.922 kb on + strand at 1163.987 kb on + strand, within CA264_05010 at 1163.988 kb on - strand, within CA264_05010 at 1163.999 kb on + strand, within CA264_05010 at 1163.999 kb on + strand, within CA264_05010 at 1164.000 kb on - strand, within CA264_05010 at 1164.032 kb on + strand, within CA264_05010 at 1164.061 kb on - strand, within CA264_05010 at 1164.063 kb on + strand, within CA264_05010 at 1164.110 kb on + strand, within CA264_05010 at 1164.110 kb on + strand, within CA264_05010 at 1164.111 kb on - strand, within CA264_05010 at 1164.134 kb on + strand, within CA264_05010 at 1164.135 kb on - strand, within CA264_05010 at 1164.135 kb on - strand, within CA264_05010 at 1164.166 kb on + strand, within CA264_05010 at 1164.167 kb on - strand, within CA264_05010 at 1164.167 kb on - strand, within CA264_05010 at 1164.356 kb on + strand, within CA264_05010 at 1164.430 kb on - strand, within CA264_05010 at 1164.440 kb on + strand, within CA264_05010 at 1164.441 kb on - strand, within CA264_05010 at 1164.476 kb on - strand, within CA264_05010 at 1164.476 kb on - strand, within CA264_05010 at 1164.476 kb on - strand, within CA264_05010 at 1164.587 kb on + strand, within CA264_05010 at 1164.597 kb on + strand, within CA264_05010 at 1164.764 kb on - strand at 1164.764 kb on - strand, within CA264_05015 at 1164.764 kb on - strand, within CA264_05015 at 1164.764 kb on - strand, within CA264_05015 at 1164.771 kb on + strand, within CA264_05015 at 1164.771 kb on + strand, within CA264_05015 at 1164.772 kb on - strand, within CA264_05015 at 1165.073 kb on + strand, within CA264_05020 at 1165.075 kb on + strand, within CA264_05020 at 1165.076 kb on - strand, within CA264_05020 at 1165.076 kb on - strand, within CA264_05020 at 1165.076 kb on - strand, within CA264_05020 at 1165.078 kb on + strand, within CA264_05020 at 1165.165 kb on + strand, within CA264_05020 at 1165.184 kb on - strand, within CA264_05020 at 1165.231 kb on + strand, within CA264_05020 at 1165.231 kb on + strand, within CA264_05020 at 1165.250 kb on + strand, within CA264_05020 at 1165.252 kb on + strand, within CA264_05020 at 1165.262 kb on + strand, within CA264_05020 at 1165.263 kb on - strand, within CA264_05020 at 1165.268 kb on + strand, within CA264_05020 at 1165.269 kb on - strand, within CA264_05020 at 1165.269 kb on - strand, within CA264_05020 at 1165.282 kb on + strand, within CA264_05020 at 1165.308 kb on + strand, within CA264_05020 at 1165.317 kb on - strand, within CA264_05020 at 1165.337 kb on + strand, within CA264_05020 at 1165.338 kb on - strand, within CA264_05020 at 1165.399 kb on + strand at 1165.416 kb on - strand at 1165.424 kb on + strand at 1165.425 kb on - strand at 1165.431 kb on - strand at 1165.431 kb on - strand at 1165.435 kb on + strand at 1165.435 kb on + strand at 1165.435 kb on + strand at 1165.497 kb on - strand at 1165.499 kb on + strand at 1165.511 kb on + strand at 1165.516 kb on + strand at 1165.516 kb on + strand at 1165.525 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.529 kb on + strand at 1165.538 kb on - strand at 1165.543 kb on + strand at 1165.543 kb on + strand at 1165.544 kb on - strand at 1165.544 kb on - strand at 1165.604 kb on + strand at 1165.616 kb on - strand at 1165.616 kb on - strand at 1165.633 kb on + strand, within CA264_05025 at 1165.836 kb on + strand, within CA264_05025 at 1165.931 kb on + strand, within CA264_05025 at 1165.938 kb on - strand, within CA264_05025
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.025 mg/ml remove 1,163,731 - -1.0 1,163,735 - -0.9 1,163,735 - -0.3 1,163,859 - -0.3 1,163,916 - -0.1 1,163,922 + -0.5 1,163,922 + +0.5 1,163,987 + CA264_05010 0.14 -0.0 1,163,988 - CA264_05010 0.14 +1.5 1,163,999 + CA264_05010 0.15 +0.4 1,163,999 + CA264_05010 0.15 -0.2 1,164,000 - CA264_05010 0.15 -0.6 1,164,032 + CA264_05010 0.19 -0.4 1,164,061 - CA264_05010 0.22 +0.7 1,164,063 + CA264_05010 0.23 -0.2 1,164,110 + CA264_05010 0.28 -0.4 1,164,110 + CA264_05010 0.28 -0.4 1,164,111 - CA264_05010 0.28 -0.4 1,164,134 + CA264_05010 0.31 -0.1 1,164,135 - CA264_05010 0.31 -0.5 1,164,135 - CA264_05010 0.31 -0.5 1,164,166 + CA264_05010 0.35 -0.2 1,164,167 - CA264_05010 0.35 -0.7 1,164,167 - CA264_05010 0.35 -0.4 1,164,356 + CA264_05010 0.57 +0.4 1,164,430 - CA264_05010 0.65 -0.1 1,164,440 + CA264_05010 0.66 -0.2 1,164,441 - CA264_05010 0.66 -0.9 1,164,476 - CA264_05010 0.70 -1.2 1,164,476 - CA264_05010 0.70 -0.9 1,164,476 - CA264_05010 0.70 +2.0 1,164,587 + CA264_05010 0.83 +0.0 1,164,597 + CA264_05010 0.84 +0.9 1,164,764 - -0.3 1,164,764 - CA264_05015 0.15 -1.1 1,164,764 - CA264_05015 0.15 -0.9 1,164,764 - CA264_05015 0.15 -0.6 1,164,771 + CA264_05015 0.18 -0.0 1,164,771 + CA264_05015 0.18 -0.2 1,164,772 - CA264_05015 0.18 -1.2 1,165,073 + CA264_05020 0.25 +2.7 1,165,075 + CA264_05020 0.26 -0.6 1,165,076 - CA264_05020 0.26 -0.2 1,165,076 - CA264_05020 0.26 -1.3 1,165,076 - CA264_05020 0.26 -0.4 1,165,078 + CA264_05020 0.26 +0.5 1,165,165 + CA264_05020 0.46 +0.7 1,165,184 - CA264_05020 0.50 -1.2 1,165,231 + CA264_05020 0.60 -0.6 1,165,231 + CA264_05020 0.60 -0.3 1,165,250 + CA264_05020 0.65 +0.2 1,165,252 + CA264_05020 0.65 -0.0 1,165,262 + CA264_05020 0.67 -0.2 1,165,263 - CA264_05020 0.68 +0.3 1,165,268 + CA264_05020 0.69 -0.0 1,165,269 - CA264_05020 0.69 -0.1 1,165,269 - CA264_05020 0.69 +0.0 1,165,282 + CA264_05020 0.72 -0.0 1,165,308 + CA264_05020 0.78 -0.8 1,165,317 - CA264_05020 0.80 -0.5 1,165,337 + CA264_05020 0.84 -0.3 1,165,338 - CA264_05020 0.84 +0.1 1,165,399 + +0.2 1,165,416 - -0.6 1,165,424 + +0.0 1,165,425 - +0.4 1,165,431 - -0.0 1,165,431 - -0.4 1,165,435 + -1.0 1,165,435 + -0.2 1,165,435 + +0.0 1,165,497 - -0.4 1,165,499 + +0.1 1,165,511 + +0.3 1,165,516 + -0.4 1,165,516 + +0.2 1,165,525 + -0.4 1,165,529 + +0.5 1,165,529 + +1.0 1,165,529 + -0.5 1,165,529 + -0.4 1,165,538 - -0.3 1,165,543 + -0.5 1,165,543 + -0.0 1,165,544 - -0.4 1,165,544 - -0.1 1,165,604 + +0.1 1,165,616 - +0.4 1,165,616 - -0.3 1,165,633 + CA264_05025 0.12 -0.0 1,165,836 + CA264_05025 0.36 -0.1 1,165,931 + CA264_05025 0.47 +0.4 1,165,938 - CA264_05025 0.48 -0.0
Or see this region's nucleotide sequence