Experiment: D-Sorbitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS04130 and ABID97_RS04135 are separated by 9 nucleotides ABID97_RS04135 and ABID97_RS04140 are separated by 5 nucleotides
ABID97_RS04130: ABID97_RS04130 - DEAD/DEAH box helicase, at 846,268 to 847,545
_RS04130
ABID97_RS04135: ABID97_RS04135 - acyl-CoA dehydrogenase family protein, at 847,555 to 848,721
_RS04135
ABID97_RS04140: ABID97_RS04140 - acyl-CoA dehydrogenase family protein, at 848,727 to 849,887
_RS04140
Position (kb) 847
848
849 Strain fitness (log2 ratio) -1
0
1 at 847.063 kb on + strand, within ABID97_RS04130 at 847.063 kb on + strand, within ABID97_RS04130 at 847.078 kb on + strand, within ABID97_RS04130 at 847.078 kb on + strand, within ABID97_RS04130 at 847.078 kb on + strand, within ABID97_RS04130 at 847.078 kb on + strand, within ABID97_RS04130 at 847.079 kb on - strand, within ABID97_RS04130 at 847.225 kb on + strand, within ABID97_RS04130 at 847.225 kb on + strand, within ABID97_RS04130 at 847.225 kb on + strand, within ABID97_RS04130 at 847.226 kb on - strand, within ABID97_RS04130 at 847.252 kb on + strand, within ABID97_RS04130 at 847.252 kb on + strand, within ABID97_RS04130 at 847.253 kb on - strand, within ABID97_RS04130 at 847.253 kb on - strand, within ABID97_RS04130 at 847.253 kb on - strand, within ABID97_RS04130 at 847.641 kb on - strand at 848.276 kb on + strand, within ABID97_RS04135 at 848.276 kb on + strand, within ABID97_RS04135 at 848.276 kb on + strand, within ABID97_RS04135 at 848.277 kb on - strand, within ABID97_RS04135 at 848.277 kb on - strand, within ABID97_RS04135 at 848.277 kb on - strand, within ABID97_RS04135 at 848.525 kb on + strand, within ABID97_RS04135 at 848.526 kb on - strand, within ABID97_RS04135 at 848.597 kb on + strand, within ABID97_RS04135 at 849.445 kb on + strand, within ABID97_RS04140
Per-strain Table
Position Strand Gene LocusTag Fraction D-Sorbitol (C) remove 847,063 + ABID97_RS04130 0.62 +0.3 847,063 + ABID97_RS04130 0.62 +0.1 847,078 + ABID97_RS04130 0.63 +0.7 847,078 + ABID97_RS04130 0.63 -0.2 847,078 + ABID97_RS04130 0.63 +0.4 847,078 + ABID97_RS04130 0.63 -0.8 847,079 - ABID97_RS04130 0.63 +0.1 847,225 + ABID97_RS04130 0.75 +0.1 847,225 + ABID97_RS04130 0.75 +0.4 847,225 + ABID97_RS04130 0.75 -0.1 847,226 - ABID97_RS04130 0.75 -0.2 847,252 + ABID97_RS04130 0.77 +0.6 847,252 + ABID97_RS04130 0.77 +0.0 847,253 - ABID97_RS04130 0.77 -0.4 847,253 - ABID97_RS04130 0.77 +0.3 847,253 - ABID97_RS04130 0.77 +0.6 847,641 - +0.1 848,276 + ABID97_RS04135 0.62 +0.9 848,276 + ABID97_RS04135 0.62 +0.3 848,276 + ABID97_RS04135 0.62 +0.3 848,277 - ABID97_RS04135 0.62 +0.2 848,277 - ABID97_RS04135 0.62 +0.2 848,277 - ABID97_RS04135 0.62 -0.1 848,525 + ABID97_RS04135 0.83 +0.5 848,526 - ABID97_RS04135 0.83 -0.8 848,597 + ABID97_RS04135 0.89 +0.5 849,445 + ABID97_RS04140 0.62 +0.4
Or see this region's nucleotide sequence