Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_930

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
1,041,725	+		PfGW456L13_929	0.17	+0.1
1,041,725	+		PfGW456L13_929	0.17	-0.1
1,041,725	+		PfGW456L13_929	0.17	+1.3
1,041,840	+		PfGW456L13_929	0.28	-2.0
1,041,840	+		PfGW456L13_929	0.28	-1.0
1,041,841	-		PfGW456L13_929	0.28	-3.0
1,041,900	+		PfGW456L13_929	0.33	-0.8
1,041,977	+		PfGW456L13_929	0.40	-0.2
1,042,089	+		PfGW456L13_929	0.51	-0.7
1,042,089	+		PfGW456L13_929	0.51	-0.6
1,042,089	+		PfGW456L13_929	0.51	-0.5
1,042,089	+		PfGW456L13_929	0.51	+1.0
1,042,089	+		PfGW456L13_929	0.51	-2.0
1,042,089	+		PfGW456L13_929	0.51	-0.2
1,042,089	+		PfGW456L13_929	0.51	-1.3
1,042,089	+		PfGW456L13_929	0.51	-0.5
1,042,089	+		PfGW456L13_929	0.51	-1.8
1,042,090	-		PfGW456L13_929	0.51	-1.7
1,042,090	-		PfGW456L13_929	0.51	-2.5
1,042,090	-		PfGW456L13_929	0.51	-2.0
1,042,090	-		PfGW456L13_929	0.51	+0.5
1,042,167	+		PfGW456L13_929	0.58	-0.6
1,042,167	+		PfGW456L13_929	0.58	-0.9
1,042,167	+		PfGW456L13_929	0.58	-1.4
1,042,167	+		PfGW456L13_929	0.58	-0.2
1,042,168	-		PfGW456L13_929	0.58	-3.1
1,042,168	-		PfGW456L13_929	0.58	+0.7
1,042,168	-		PfGW456L13_929	0.58	+0.3
1,042,168	-		PfGW456L13_929	0.58	-1.6
1,042,168	-		PfGW456L13_929	0.58	-0.5
1,042,176	+		PfGW456L13_929	0.59	-2.2
1,042,176	+		PfGW456L13_929	0.59	+1.0
1,042,176	+		PfGW456L13_929	0.59	-1.0
1,042,176	+		PfGW456L13_929	0.59	-0.9
1,042,176	+		PfGW456L13_929	0.59	+0.2
1,042,177	-		PfGW456L13_929	0.59	-0.4
1,042,177	-		PfGW456L13_929	0.59	+0.5
1,042,177	-		PfGW456L13_929	0.59	-0.5
1,042,177	-		PfGW456L13_929	0.59	-1.0
1,042,177	-		PfGW456L13_929	0.59	-1.1
1,042,195	-		PfGW456L13_929	0.60	-0.0
1,042,195	-		PfGW456L13_929	0.60	-1.5
1,042,220	+		PfGW456L13_929	0.63	-1.1
1,042,221	-		PfGW456L13_929	0.63	+1.6
1,042,401	+		PfGW456L13_929	0.80	-1.6
1,042,401	+		PfGW456L13_929	0.80	-0.5
1,042,401	+		PfGW456L13_929	0.80	-1.9
1,042,402	-		PfGW456L13_929	0.80	-0.9
1,042,402	-		PfGW456L13_929	0.80	-0.5
1,042,402	-		PfGW456L13_929	0.80	-0.3
1,042,402	-		PfGW456L13_929	0.80	-1.0
1,042,402	-		PfGW456L13_929	0.80	+0.0
1,042,402	-		PfGW456L13_929	0.80	-0.6
1,042,440	+		PfGW456L13_929	0.83	-0.6
1,042,441	-		PfGW456L13_929	0.83	-0.8
1,042,515	+				-1.3
1,042,545	+				-1.9
1,042,545	+				-0.8
1,042,545	+				-2.0
1,042,545	+				-2.1
1,042,546	-				+1.0
1,042,572	-				-0.7
1,042,572	-				-0.9
1,042,620	+				-0.9
1,042,620	+				+0.9
1,042,620	+				-0.7
1,042,621	-				-2.9
1,042,621	-				-0.6
1,042,621	-				+0.2
1,042,638	+				-0.0
1,042,638	+				-1.3
1,042,638	+				+0.5
1,042,639	-				+0.1
1,042,639	-				-2.5
1,042,693	-				+0.6
1,042,716	+				-0.1
1,042,717	-				-1.3
1,042,718	+				-0.0
1,042,718	+				-0.7
1,042,718	+				-3.6
1,042,718	+				-2.9
1,042,718	+				-1.9
1,042,718	+				-1.1
1,042,719	-				-1.1
1,042,719	-				-2.5
1,042,749	-				-1.2
1,042,946	-		PfGW456L13_930	0.22	-2.2
1,042,958	+		PfGW456L13_930	0.23	-1.0
1,042,959	-		PfGW456L13_930	0.23	-0.6
1,042,968	+		PfGW456L13_930	0.24	-0.8
1,042,968	+		PfGW456L13_930	0.24	+0.6
1,043,001	+		PfGW456L13_930	0.27	-0.0
1,043,002	-		PfGW456L13_930	0.27	-1.5
1,043,113	+		PfGW456L13_930	0.37	-0.9
1,043,127	+		PfGW456L13_930	0.38	+1.0
1,043,415	+		PfGW456L13_930	0.63	-1.4
1,043,415	+		PfGW456L13_930	0.63	-0.9
1,043,415	+		PfGW456L13_930	0.63	-0.9
1,043,416	-		PfGW456L13_930	0.63	-0.3
1,043,416	-		PfGW456L13_930	0.63	-2.4
1,043,416	-		PfGW456L13_930	0.63	-0.2
1,043,416	-		PfGW456L13_930	0.63	-0.9
1,043,513	+		PfGW456L13_930	0.72	-0.8
1,043,514	-		PfGW456L13_930	0.72	-0.2
1,043,541	+		PfGW456L13_930	0.74	-0.1
1,043,541	+		PfGW456L13_930	0.74	-0.5
1,043,541	+		PfGW456L13_930	0.74	-1.4
1,043,541	+		PfGW456L13_930	0.74	-3.0
1,043,542	-		PfGW456L13_930	0.74	-0.1
1,043,542	-		PfGW456L13_930	0.74	-0.2
1,043,542	-		PfGW456L13_930	0.74	-0.8
1,043,589	+		PfGW456L13_930	0.78	+0.4
1,043,590	-		PfGW456L13_930	0.78	-0.8
1,043,590	-		PfGW456L13_930	0.78	-2.2
1,043,590	-		PfGW456L13_930	0.78	-1.2
1,043,643	+		PfGW456L13_930	0.83	-3.0
1,043,680	-		PfGW456L13_930	0.86	-0.8
1,043,703	+		PfGW456L13_930	0.88	-2.2
1,043,703	+		PfGW456L13_930	0.88	-1.2
1,043,703	+		PfGW456L13_930	0.88	-1.7
1,043,703	+		PfGW456L13_930	0.88	-1.2
1,043,704	-		PfGW456L13_930	0.88	-0.5
1,043,704	-		PfGW456L13_930	0.88	-1.1
1,043,793	+				-1.3
1,043,793	+				-1.2
1,043,793	+				-3.2
1,043,793	+				-0.8
1,043,793	+				+0.5
1,043,793	+				-2.7
1,043,793	+				-0.6
1,043,794	-				-3.0
1,043,794	-				-1.0
1,043,794	-				-0.6
1,043,794	-				+0.1
1,043,800	-				-0.4
1,043,800	-				-1.1
1,043,952	+		PfGW456L13_931	0.13	-1.5
1,043,997	-		PfGW456L13_931	0.18	-0.7
1,043,997	-		PfGW456L13_931	0.18	-0.3
1,044,008	+		PfGW456L13_931	0.19	-2.4
1,044,008	+		PfGW456L13_931	0.19	-3.0
1,044,008	+		PfGW456L13_931	0.19	-0.3
1,044,008	+		PfGW456L13_931	0.19	+1.3
1,044,009	-		PfGW456L13_931	0.19	-0.9
1,044,009	-		PfGW456L13_931	0.19	-0.7
1,044,009	-		PfGW456L13_931	0.19	-1.6
1,044,015	-		PfGW456L13_931	0.20	-1.7
1,044,015	-		PfGW456L13_931	0.20	-0.8
1,044,056	+		PfGW456L13_931	0.24	+0.5
1,044,057	-		PfGW456L13_931	0.24	-0.9
1,044,057	-		PfGW456L13_931	0.24	-0.7
1,044,057	-		PfGW456L13_931	0.24	-1.7
1,044,083	+		PfGW456L13_931	0.27	+0.3
1,044,083	+		PfGW456L13_931	0.27	-0.8
1,044,083	+		PfGW456L13_931	0.27	-3.3
1,044,084	-		PfGW456L13_931	0.27	-1.5
1,044,084	-		PfGW456L13_931	0.27	-0.5
1,044,165	-		PfGW456L13_931	0.36	+0.2
1,044,165	-		PfGW456L13_931	0.36	-2.3
1,044,255	-		PfGW456L13_931	0.46	-0.9
1,044,362	+		PfGW456L13_931	0.57	-0.4
1,044,363	-		PfGW456L13_931	0.57	+0.7
1,044,363	-		PfGW456L13_931	0.57	-0.6
1,044,377	+		PfGW456L13_931	0.59	-1.2
1,044,377	+		PfGW456L13_931	0.59	-0.5
1,044,410	+		PfGW456L13_931	0.63	+0.1
1,044,411	-		PfGW456L13_931	0.63	+0.5
1,044,613	+		PfGW456L13_931	0.85	-1.5
1,044,614	-		PfGW456L13_931	0.85	-0.5
1,044,805	+				-1.7
1,044,805	+				+1.3
1,044,805	+				-1.0
1,044,806	-				-1.2
1,044,806	-				-1.2
1,044,806	-				-1.4
1,044,806	-				-0.0
1,044,832	+				+1.7
1,044,833	-				+0.1