Experiment: D-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5006 and PfGW456L13_5007 overlap by 1 nucleotides PfGW456L13_5007 and PfGW456L13_5008 overlap by 1 nucleotides PfGW456L13_5008 and PfGW456L13_5009 are separated by 275 nucleotides
PfGW456L13_5006 - Uncharacterized ABC transporter, periplasmic component YrbD, at 5,583,120 to 5,583,587
_5006
PfGW456L13_5007 - Uncharacterized ABC transporter, permease component YrbE, at 5,583,587 to 5,584,384
_5007
PfGW456L13_5008 - Uncharacterized ABC transporter, ATP-binding protein YrbF, at 5,584,384 to 5,585,193
_5008
PfGW456L13_5009 - Arabinose 5-phosphate isomerase (EC 5.3.1.13), at 5,585,469 to 5,586,443
_5009
Position (kb) 5584
5585
5586 Strain fitness (log2 ratio) -2
-1
0
1 at 5583.468 kb on - strand, within PfGW456L13_5006 at 5583.469 kb on + strand, within PfGW456L13_5006 at 5583.653 kb on + strand at 5583.653 kb on + strand at 5583.653 kb on + strand at 5583.653 kb on + strand at 5583.653 kb on + strand at 5584.547 kb on + strand, within PfGW456L13_5008 at 5584.591 kb on + strand, within PfGW456L13_5008 at 5584.691 kb on + strand, within PfGW456L13_5008 at 5585.103 kb on + strand, within PfGW456L13_5008 at 5585.252 kb on + strand at 5585.252 kb on + strand at 5585.252 kb on + strand at 5585.253 kb on - strand at 5585.253 kb on - strand at 5585.253 kb on - strand at 5585.253 kb on - strand at 5585.253 kb on - strand at 5585.284 kb on + strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.285 kb on - strand at 5585.287 kb on - strand at 5585.287 kb on - strand at 5585.361 kb on + strand at 5585.362 kb on - strand at 5585.402 kb on + strand at 5585.402 kb on + strand at 5585.423 kb on - strand at 5585.429 kb on + strand at 5585.429 kb on + strand at 5585.431 kb on + strand at 5585.456 kb on + strand at 5585.456 kb on + strand at 5585.456 kb on + strand at 5585.456 kb on + strand at 5585.456 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (C) remove 5,583,468 - PfGW456L13_5006 0.74 -1.6 5,583,469 + PfGW456L13_5006 0.75 -0.4 5,583,653 + -1.6 5,583,653 + +1.2 5,583,653 + -1.6 5,583,653 + -0.4 5,583,653 + -1.4 5,584,547 + PfGW456L13_5008 0.20 -1.6 5,584,591 + PfGW456L13_5008 0.26 -1.4 5,584,691 + PfGW456L13_5008 0.38 -2.0 5,585,103 + PfGW456L13_5008 0.89 -1.0 5,585,252 + +0.6 5,585,252 + +1.2 5,585,252 + -2.5 5,585,253 - -0.3 5,585,253 - +0.5 5,585,253 - -0.4 5,585,253 - +1.3 5,585,253 - -0.9 5,585,284 + -0.6 5,585,285 - -0.6 5,585,285 - -1.3 5,585,285 - -0.9 5,585,285 - +0.1 5,585,285 - -1.5 5,585,285 - -1.0 5,585,285 - +0.5 5,585,285 - -0.1 5,585,285 - -1.2 5,585,285 - +0.1 5,585,285 - -1.4 5,585,285 - -0.5 5,585,285 - -0.1 5,585,285 - -0.4 5,585,285 - -0.3 5,585,285 - +0.2 5,585,285 - -0.6 5,585,287 - +0.1 5,585,287 - -1.0 5,585,361 + +1.2 5,585,362 - -0.4 5,585,402 + +0.7 5,585,402 + +0.0 5,585,423 - -0.0 5,585,429 + +1.5 5,585,429 + -2.6 5,585,431 + +0.4 5,585,456 + +1.3 5,585,456 + -0.4 5,585,456 + +0.0 5,585,456 + -0.4 5,585,456 + +0.1
Or see this region's nucleotide sequence