Experiment: D-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_440 and PfGW456L13_441 overlap by 21 nucleotides PfGW456L13_441 and PfGW456L13_442 overlap by 14 nucleotides PfGW456L13_442 and PfGW456L13_443 overlap by 12 nucleotides PfGW456L13_443 and PfGW456L13_444 are separated by 302 nucleotides
PfGW456L13_440 - Serine acetyltransferase (EC 2.3.1.30), at 506,437 to 507,363
_440
PfGW456L13_441 - hypothetical protein, at 507,343 to 507,456
_441
PfGW456L13_442 - hypothetical protein, at 507,443 to 507,565
_442
PfGW456L13_443 - D-cysteine desulfhydrase (EC 4.4.1.15), at 507,554 to 508,546
_443
PfGW456L13_444 - Cystine ABC transporter, periplasmic cystine-binding protein FliY, at 508,849 to 509,649
_444
Position (kb) 507
508
509 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 506.580 kb on - strand, within PfGW456L13_440 at 506.684 kb on + strand, within PfGW456L13_440 at 506.684 kb on + strand, within PfGW456L13_440 at 506.684 kb on + strand, within PfGW456L13_440 at 506.684 kb on + strand, within PfGW456L13_440 at 506.685 kb on - strand, within PfGW456L13_440 at 506.685 kb on - strand, within PfGW456L13_440 at 506.685 kb on - strand, within PfGW456L13_440 at 506.685 kb on - strand, within PfGW456L13_440 at 506.685 kb on - strand, within PfGW456L13_440 at 506.685 kb on - strand, within PfGW456L13_440 at 506.852 kb on + strand, within PfGW456L13_440 at 506.949 kb on - strand, within PfGW456L13_440 at 506.949 kb on - strand, within PfGW456L13_440 at 506.959 kb on + strand, within PfGW456L13_440 at 507.074 kb on + strand, within PfGW456L13_440 at 507.140 kb on + strand, within PfGW456L13_440 at 507.366 kb on + strand, within PfGW456L13_441 at 507.367 kb on - strand, within PfGW456L13_441 at 507.415 kb on + strand, within PfGW456L13_441 at 507.415 kb on + strand, within PfGW456L13_441 at 507.416 kb on - strand, within PfGW456L13_441 at 507.416 kb on - strand, within PfGW456L13_441 at 507.416 kb on - strand, within PfGW456L13_441 at 507.420 kb on + strand, within PfGW456L13_441 at 507.444 kb on + strand at 507.444 kb on + strand at 507.445 kb on - strand at 507.445 kb on - strand at 507.445 kb on - strand at 507.454 kb on + strand at 507.455 kb on - strand at 507.480 kb on - strand, within PfGW456L13_442 at 507.481 kb on + strand, within PfGW456L13_442 at 507.518 kb on + strand, within PfGW456L13_442 at 507.518 kb on + strand, within PfGW456L13_442 at 507.518 kb on + strand, within PfGW456L13_442 at 507.518 kb on + strand, within PfGW456L13_442 at 507.519 kb on - strand, within PfGW456L13_442 at 507.519 kb on - strand, within PfGW456L13_442 at 507.519 kb on - strand, within PfGW456L13_442 at 507.519 kb on - strand, within PfGW456L13_442 at 507.519 kb on - strand, within PfGW456L13_442 at 507.520 kb on + strand, within PfGW456L13_442 at 507.520 kb on + strand, within PfGW456L13_442 at 507.520 kb on + strand, within PfGW456L13_442 at 507.521 kb on - strand, within PfGW456L13_442 at 507.660 kb on - strand, within PfGW456L13_443 at 507.660 kb on - strand, within PfGW456L13_443 at 507.723 kb on - strand, within PfGW456L13_443 at 507.723 kb on - strand, within PfGW456L13_443 at 507.723 kb on - strand, within PfGW456L13_443 at 507.840 kb on + strand, within PfGW456L13_443 at 507.881 kb on + strand, within PfGW456L13_443 at 507.881 kb on + strand, within PfGW456L13_443 at 507.881 kb on + strand, within PfGW456L13_443 at 507.881 kb on + strand, within PfGW456L13_443 at 507.882 kb on - strand, within PfGW456L13_443 at 507.882 kb on - strand, within PfGW456L13_443 at 507.882 kb on - strand, within PfGW456L13_443 at 508.058 kb on + strand, within PfGW456L13_443 at 508.058 kb on + strand, within PfGW456L13_443 at 508.058 kb on + strand, within PfGW456L13_443 at 508.059 kb on - strand, within PfGW456L13_443 at 508.059 kb on - strand, within PfGW456L13_443 at 508.059 kb on - strand, within PfGW456L13_443 at 508.059 kb on - strand, within PfGW456L13_443 at 508.062 kb on + strand, within PfGW456L13_443 at 508.063 kb on - strand, within PfGW456L13_443 at 508.328 kb on + strand, within PfGW456L13_443 at 508.329 kb on - strand, within PfGW456L13_443 at 508.329 kb on - strand, within PfGW456L13_443 at 508.329 kb on - strand, within PfGW456L13_443 at 508.329 kb on - strand, within PfGW456L13_443 at 508.329 kb on - strand, within PfGW456L13_443 at 508.329 kb on - strand, within PfGW456L13_443 at 508.421 kb on + strand, within PfGW456L13_443 at 508.421 kb on + strand, within PfGW456L13_443 at 508.421 kb on + strand, within PfGW456L13_443 at 508.422 kb on - strand, within PfGW456L13_443 at 508.489 kb on + strand at 508.489 kb on + strand at 508.490 kb on - strand at 508.529 kb on + strand at 508.529 kb on + strand at 508.544 kb on + strand at 508.638 kb on + strand at 508.638 kb on + strand at 508.638 kb on + strand at 508.638 kb on + strand at 508.639 kb on - strand at 508.643 kb on + strand at 508.643 kb on + strand at 508.644 kb on - strand at 508.644 kb on - strand at 508.644 kb on - strand at 508.644 kb on - strand at 508.644 kb on - strand at 508.644 kb on - strand at 508.644 kb on - strand at 508.644 kb on - strand at 508.644 kb on - strand at 508.644 kb on - strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.716 kb on + strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.717 kb on - strand at 508.718 kb on + strand at 508.718 kb on + strand at 508.718 kb on + strand at 508.718 kb on + strand at 508.718 kb on + strand at 508.719 kb on - strand at 508.719 kb on - strand at 508.719 kb on - strand at 508.727 kb on + strand at 508.727 kb on + strand at 508.728 kb on - strand at 508.728 kb on - strand at 508.753 kb on + strand at 508.753 kb on + strand at 508.753 kb on + strand at 508.754 kb on - strand at 508.786 kb on + strand at 508.786 kb on + strand at 508.786 kb on + strand at 508.786 kb on + strand at 508.787 kb on - strand at 508.787 kb on - strand at 508.827 kb on + strand at 508.828 kb on - strand at 508.865 kb on + strand at 508.865 kb on + strand at 508.865 kb on + strand at 508.865 kb on + strand at 508.865 kb on + strand at 508.865 kb on + strand at 508.865 kb on + strand at 508.866 kb on - strand at 508.866 kb on - strand at 508.866 kb on - strand at 508.866 kb on - strand at 508.866 kb on - strand at 508.970 kb on + strand, within PfGW456L13_444 at 508.996 kb on + strand, within PfGW456L13_444 at 508.997 kb on - strand, within PfGW456L13_444 at 508.997 kb on - strand, within PfGW456L13_444 at 508.997 kb on - strand, within PfGW456L13_444 at 509.197 kb on + strand, within PfGW456L13_444 at 509.197 kb on + strand, within PfGW456L13_444 at 509.197 kb on + strand, within PfGW456L13_444 at 509.197 kb on + strand, within PfGW456L13_444 at 509.197 kb on + strand, within PfGW456L13_444 at 509.197 kb on + strand, within PfGW456L13_444 at 509.197 kb on + strand, within PfGW456L13_444 at 509.197 kb on + strand, within PfGW456L13_444 at 509.197 kb on + strand, within PfGW456L13_444 at 509.197 kb on + strand, within PfGW456L13_444 at 509.198 kb on - strand, within PfGW456L13_444 at 509.198 kb on - strand, within PfGW456L13_444 at 509.198 kb on - strand, within PfGW456L13_444 at 509.216 kb on - strand, within PfGW456L13_444 at 509.216 kb on - strand, within PfGW456L13_444 at 509.216 kb on - strand, within PfGW456L13_444 at 509.312 kb on + strand, within PfGW456L13_444 at 509.329 kb on + strand, within PfGW456L13_444 at 509.329 kb on + strand, within PfGW456L13_444 at 509.329 kb on + strand, within PfGW456L13_444 at 509.330 kb on - strand, within PfGW456L13_444 at 509.330 kb on - strand, within PfGW456L13_444 at 509.330 kb on - strand, within PfGW456L13_444 at 509.330 kb on - strand, within PfGW456L13_444 at 509.359 kb on - strand, within PfGW456L13_444 at 509.359 kb on - strand, within PfGW456L13_444 at 509.377 kb on + strand, within PfGW456L13_444 at 509.377 kb on + strand, within PfGW456L13_444 at 509.378 kb on - strand, within PfGW456L13_444 at 509.378 kb on - strand, within PfGW456L13_444 at 509.378 kb on - strand, within PfGW456L13_444 at 509.378 kb on - strand, within PfGW456L13_444 at 509.523 kb on + strand, within PfGW456L13_444
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (C) remove 506,580 - PfGW456L13_440 0.15 +0.4 506,684 + PfGW456L13_440 0.27 +1.1 506,684 + PfGW456L13_440 0.27 +0.6 506,684 + PfGW456L13_440 0.27 +1.2 506,684 + PfGW456L13_440 0.27 +1.8 506,685 - PfGW456L13_440 0.27 -0.8 506,685 - PfGW456L13_440 0.27 -0.5 506,685 - PfGW456L13_440 0.27 -3.1 506,685 - PfGW456L13_440 0.27 -0.9 506,685 - PfGW456L13_440 0.27 +0.1 506,685 - PfGW456L13_440 0.27 +0.3 506,852 + PfGW456L13_440 0.45 +0.3 506,949 - PfGW456L13_440 0.55 -1.1 506,949 - PfGW456L13_440 0.55 -0.3 506,959 + PfGW456L13_440 0.56 -0.3 507,074 + PfGW456L13_440 0.69 +0.7 507,140 + PfGW456L13_440 0.76 +0.4 507,366 + PfGW456L13_441 0.20 +0.4 507,367 - PfGW456L13_441 0.21 +0.1 507,415 + PfGW456L13_441 0.63 +1.3 507,415 + PfGW456L13_441 0.63 -0.9 507,416 - PfGW456L13_441 0.64 +0.1 507,416 - PfGW456L13_441 0.64 -1.9 507,416 - PfGW456L13_441 0.64 +0.5 507,420 + PfGW456L13_441 0.68 +0.5 507,444 + -0.1 507,444 + -0.2 507,445 - -0.7 507,445 - -1.0 507,445 - -0.2 507,454 + +0.2 507,455 - -0.6 507,480 - PfGW456L13_442 0.30 -0.0 507,481 + PfGW456L13_442 0.31 -0.0 507,518 + PfGW456L13_442 0.61 +0.7 507,518 + PfGW456L13_442 0.61 +0.9 507,518 + PfGW456L13_442 0.61 +0.4 507,518 + PfGW456L13_442 0.61 +0.4 507,519 - PfGW456L13_442 0.62 -0.1 507,519 - PfGW456L13_442 0.62 +0.2 507,519 - PfGW456L13_442 0.62 +0.3 507,519 - PfGW456L13_442 0.62 +0.5 507,519 - PfGW456L13_442 0.62 -0.6 507,520 + PfGW456L13_442 0.63 +1.2 507,520 + PfGW456L13_442 0.63 -0.0 507,520 + PfGW456L13_442 0.63 +0.5 507,521 - PfGW456L13_442 0.63 +0.6 507,660 - PfGW456L13_443 0.11 +0.8 507,660 - PfGW456L13_443 0.11 +0.8 507,723 - PfGW456L13_443 0.17 +0.9 507,723 - PfGW456L13_443 0.17 +0.2 507,723 - PfGW456L13_443 0.17 -0.1 507,840 + PfGW456L13_443 0.29 -0.1 507,881 + PfGW456L13_443 0.33 +1.3 507,881 + PfGW456L13_443 0.33 -0.2 507,881 + PfGW456L13_443 0.33 +0.6 507,881 + PfGW456L13_443 0.33 +0.6 507,882 - PfGW456L13_443 0.33 -1.3 507,882 - PfGW456L13_443 0.33 +1.1 507,882 - PfGW456L13_443 0.33 -2.0 508,058 + PfGW456L13_443 0.51 +0.1 508,058 + PfGW456L13_443 0.51 +0.8 508,058 + PfGW456L13_443 0.51 +0.1 508,059 - PfGW456L13_443 0.51 +0.1 508,059 - PfGW456L13_443 0.51 +1.3 508,059 - PfGW456L13_443 0.51 +0.1 508,059 - PfGW456L13_443 0.51 +1.0 508,062 + PfGW456L13_443 0.51 -1.4 508,063 - PfGW456L13_443 0.51 +0.6 508,328 + PfGW456L13_443 0.78 +0.2 508,329 - PfGW456L13_443 0.78 -0.4 508,329 - PfGW456L13_443 0.78 -0.0 508,329 - PfGW456L13_443 0.78 +0.9 508,329 - PfGW456L13_443 0.78 +0.3 508,329 - PfGW456L13_443 0.78 -0.7 508,329 - PfGW456L13_443 0.78 +0.5 508,421 + PfGW456L13_443 0.87 +0.8 508,421 + PfGW456L13_443 0.87 +0.3 508,421 + PfGW456L13_443 0.87 +0.5 508,422 - PfGW456L13_443 0.87 +0.7 508,489 + +1.7 508,489 + +0.7 508,490 - -1.4 508,529 + -1.2 508,529 + +0.7 508,544 + -2.9 508,638 + +1.1 508,638 + -0.2 508,638 + -0.9 508,638 + -0.6 508,639 - -0.3 508,643 + -0.5 508,643 + -0.1 508,644 - +0.3 508,644 - -0.3 508,644 - +0.1 508,644 - -0.4 508,644 - +0.2 508,644 - -0.4 508,644 - -0.0 508,644 - -0.5 508,644 - +1.3 508,644 - +0.7 508,716 + -0.1 508,716 + +0.6 508,716 + -1.0 508,716 + +0.5 508,716 + +0.4 508,716 + -1.0 508,716 + -0.3 508,716 + -0.7 508,716 + +0.1 508,716 + +1.9 508,716 + +1.0 508,716 + +0.9 508,716 + -3.0 508,716 + -0.5 508,716 + -0.2 508,717 - -0.8 508,717 - +0.2 508,717 - +1.0 508,717 - -0.0 508,717 - -0.0 508,717 - +0.1 508,717 - -0.5 508,717 - +1.2 508,717 - +0.3 508,717 - -1.5 508,717 - +0.9 508,717 - -0.6 508,717 - +0.5 508,717 - +1.1 508,717 - -0.2 508,717 - +0.7 508,717 - +1.4 508,717 - +1.0 508,717 - +1.0 508,718 + +0.5 508,718 + +0.4 508,718 + -1.3 508,718 + +1.6 508,718 + -2.3 508,719 - +0.5 508,719 - -0.1 508,719 - +1.4 508,727 + +0.6 508,727 + -0.3 508,728 - -0.9 508,728 - +0.7 508,753 + -2.1 508,753 + -0.7 508,753 + +1.2 508,754 - -0.3 508,786 + -0.8 508,786 + +0.3 508,786 + +0.8 508,786 + +1.1 508,787 - -1.2 508,787 - +0.4 508,827 + +1.2 508,828 - -1.8 508,865 + -0.3 508,865 + -0.5 508,865 + -0.4 508,865 + +0.2 508,865 + -1.4 508,865 + -0.2 508,865 + +0.3 508,866 - +0.4 508,866 - +0.6 508,866 - +1.4 508,866 - -0.8 508,866 - +0.9 508,970 + PfGW456L13_444 0.15 +1.5 508,996 + PfGW456L13_444 0.18 -0.3 508,997 - PfGW456L13_444 0.18 +0.4 508,997 - PfGW456L13_444 0.18 +0.2 508,997 - PfGW456L13_444 0.18 +0.7 509,197 + PfGW456L13_444 0.43 +0.2 509,197 + PfGW456L13_444 0.43 -0.1 509,197 + PfGW456L13_444 0.43 -3.4 509,197 + PfGW456L13_444 0.43 -0.1 509,197 + PfGW456L13_444 0.43 -2.1 509,197 + PfGW456L13_444 0.43 +2.0 509,197 + PfGW456L13_444 0.43 -0.4 509,197 + PfGW456L13_444 0.43 -0.1 509,197 + PfGW456L13_444 0.43 -1.1 509,197 + PfGW456L13_444 0.43 -1.3 509,198 - PfGW456L13_444 0.44 +0.5 509,198 - PfGW456L13_444 0.44 +0.4 509,198 - PfGW456L13_444 0.44 +0.4 509,216 - PfGW456L13_444 0.46 +0.3 509,216 - PfGW456L13_444 0.46 -1.5 509,216 - PfGW456L13_444 0.46 +0.2 509,312 + PfGW456L13_444 0.58 +1.0 509,329 + PfGW456L13_444 0.60 +1.5 509,329 + PfGW456L13_444 0.60 -0.2 509,329 + PfGW456L13_444 0.60 +1.5 509,330 - PfGW456L13_444 0.60 -0.1 509,330 - PfGW456L13_444 0.60 -0.6 509,330 - PfGW456L13_444 0.60 -1.0 509,330 - PfGW456L13_444 0.60 +0.6 509,359 - PfGW456L13_444 0.64 +0.5 509,359 - PfGW456L13_444 0.64 +0.7 509,377 + PfGW456L13_444 0.66 -0.7 509,377 + PfGW456L13_444 0.66 -0.5 509,378 - PfGW456L13_444 0.66 -0.3 509,378 - PfGW456L13_444 0.66 -0.9 509,378 - PfGW456L13_444 0.66 +0.1 509,378 - PfGW456L13_444 0.66 +0.2 509,523 + PfGW456L13_444 0.84 +0.3
Or see this region's nucleotide sequence