Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4287

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
4,801,638	+		PfGW456L13_4286	0.39	+0.7
4,801,639	-		PfGW456L13_4286	0.39	-0.7
4,801,639	-		PfGW456L13_4286	0.39	-0.6
4,801,639	-		PfGW456L13_4286	0.39	+0.0
4,801,733	+		PfGW456L13_4286	0.46	+1.1
4,801,734	-		PfGW456L13_4286	0.46	+0.4
4,801,734	-		PfGW456L13_4286	0.46	+1.6
4,801,734	-		PfGW456L13_4286	0.46	-0.4
4,801,734	-		PfGW456L13_4286	0.46	+0.4
4,801,734	-		PfGW456L13_4286	0.46	-0.6
4,801,750	+		PfGW456L13_4286	0.47	-0.6
4,801,751	-		PfGW456L13_4286	0.47	-1.7
4,801,838	+		PfGW456L13_4286	0.53	+1.4
4,801,913	+		PfGW456L13_4286	0.59	+0.5
4,801,913	+		PfGW456L13_4286	0.59	-1.4
4,801,913	+		PfGW456L13_4286	0.59	+0.3
4,801,913	+		PfGW456L13_4286	0.59	+0.2
4,801,914	-		PfGW456L13_4286	0.59	+0.1
4,801,914	-		PfGW456L13_4286	0.59	-0.5
4,801,914	-		PfGW456L13_4286	0.59	+0.0
4,801,914	-		PfGW456L13_4286	0.59	-0.3
4,801,914	-		PfGW456L13_4286	0.59	+0.9
4,801,929	-		PfGW456L13_4286	0.60	-0.2
4,801,950	-		PfGW456L13_4286	0.61	-0.5
4,801,950	-		PfGW456L13_4286	0.61	+1.0
4,801,950	-		PfGW456L13_4286	0.61	+0.4
4,801,950	-		PfGW456L13_4286	0.61	+0.4
4,801,958	+		PfGW456L13_4286	0.62	-0.2
4,801,958	+		PfGW456L13_4286	0.62	+2.0
4,801,958	+		PfGW456L13_4286	0.62	-1.1
4,801,958	+		PfGW456L13_4286	0.62	-2.7
4,801,958	+		PfGW456L13_4286	0.62	-1.0
4,801,958	+		PfGW456L13_4286	0.62	-0.3
4,801,958	+		PfGW456L13_4286	0.62	-0.1
4,801,959	-		PfGW456L13_4286	0.62	+0.0
4,801,959	-		PfGW456L13_4286	0.62	+0.2
4,801,959	-		PfGW456L13_4286	0.62	+0.8
4,801,959	-		PfGW456L13_4286	0.62	-0.8
4,801,959	-		PfGW456L13_4286	0.62	+1.0
4,801,959	-		PfGW456L13_4286	0.62	+0.0
4,801,959	-		PfGW456L13_4286	0.62	+0.0
4,802,015	+		PfGW456L13_4286	0.66	-0.5
4,802,117	+		PfGW456L13_4286	0.73	+1.0
4,802,117	+		PfGW456L13_4286	0.73	+0.1
4,802,118	-		PfGW456L13_4286	0.73	+0.0
4,802,118	-		PfGW456L13_4286	0.73	-0.5
4,802,118	-		PfGW456L13_4286	0.73	+1.8
4,802,126	+		PfGW456L13_4286	0.74	-2.4
4,802,126	+		PfGW456L13_4286	0.74	-1.1
4,802,126	+		PfGW456L13_4286	0.74	+0.0
4,802,126	+		PfGW456L13_4286	0.74	-0.2
4,802,126	+		PfGW456L13_4286	0.74	-0.4
4,802,127	-		PfGW456L13_4286	0.74	-1.0
4,802,127	-		PfGW456L13_4286	0.74	-0.1
4,802,127	-		PfGW456L13_4286	0.74	-1.0
4,802,127	-		PfGW456L13_4286	0.74	-0.1
4,802,127	-		PfGW456L13_4286	0.74	-1.0
4,802,127	-		PfGW456L13_4286	0.74	-0.3
4,802,127	-		PfGW456L13_4286	0.74	+0.5
4,802,180	+		PfGW456L13_4286	0.78	-1.2
4,802,187	-		PfGW456L13_4286	0.78	+0.1
4,802,219	+		PfGW456L13_4286	0.80	+1.0
4,802,219	+		PfGW456L13_4286	0.80	-0.5
4,802,219	+		PfGW456L13_4286	0.80	-1.4
4,802,219	+		PfGW456L13_4286	0.80	+0.3
4,802,219	+		PfGW456L13_4286	0.80	+1.0
4,802,220	-		PfGW456L13_4286	0.81	+1.5
4,802,231	+		PfGW456L13_4286	0.81	+0.2
4,802,231	+		PfGW456L13_4286	0.81	+0.1
4,802,231	+		PfGW456L13_4286	0.81	-0.3
4,802,321	+		PfGW456L13_4286	0.88	-0.9
4,802,360	+				-0.6
4,802,495	+				-0.1
4,802,495	+				-0.1
4,802,495	+				-1.3
4,802,495	+				-1.9
4,802,495	+				+0.3
4,802,495	+				-0.3
4,802,495	+				+1.2
4,802,496	-				-1.3
4,802,496	-				-0.3
4,802,496	-				-0.1
4,802,496	-				+0.5
4,802,496	-				-0.4
4,802,496	-				-1.2
4,802,496	-				-0.0
4,802,511	-				+0.6
4,802,576	+				+0.5
4,802,576	+				-1.4
4,802,577	-				-0.3
4,802,577	-				+1.6
4,802,577	-				-0.1
4,802,588	-				-0.0
4,802,655	+				+0.9
4,802,655	+				+0.5
4,802,655	+				-1.1
4,802,655	+				-0.4
4,802,655	+				-1.7
4,802,655	+				+0.8
4,802,655	+				+0.5
4,802,655	+				+0.3
4,802,655	+				-0.1
4,802,655	+				-0.4
4,802,655	+				+0.3
4,802,655	+				+0.5
4,802,655	+				-0.1
4,802,655	+				+0.6
4,802,655	+				+0.0
4,802,656	-				+0.2
4,802,656	-				-0.6
4,802,656	-				-1.4
4,802,656	-				-1.1
4,802,656	-				+1.6
4,802,656	-				-0.4
4,802,656	-				+1.1
4,802,656	-				-0.9
4,802,656	-				+2.0
4,802,656	-				-0.2
4,802,656	-				+0.4
4,802,658	-				+0.9
4,802,658	-				+0.4
4,802,676	+				+3.2
4,802,677	-				-2.4
4,802,713	+		PfGW456L13_4287	0.11	+0.0
4,802,714	-		PfGW456L13_4287	0.11	+2.2
4,802,768	-		PfGW456L13_4287	0.15	+1.7
4,802,792	-		PfGW456L13_4287	0.17	-0.6
4,802,824	+		PfGW456L13_4287	0.19	+0.9
4,802,825	-		PfGW456L13_4287	0.20	+0.1
4,802,946	+		PfGW456L13_4287	0.29	-0.3
4,802,946	+		PfGW456L13_4287	0.29	-1.7
4,803,046	+		PfGW456L13_4287	0.36	-1.5
4,803,046	+		PfGW456L13_4287	0.36	-1.0
4,803,046	+		PfGW456L13_4287	0.36	+0.1
4,803,068	+		PfGW456L13_4287	0.38	+0.1
4,803,068	+		PfGW456L13_4287	0.38	+0.4
4,803,068	+		PfGW456L13_4287	0.38	-1.0
4,803,068	+		PfGW456L13_4287	0.38	-2.9
4,803,069	-		PfGW456L13_4287	0.38	+0.0
4,803,069	-		PfGW456L13_4287	0.38	+0.7
4,803,069	-		PfGW456L13_4287	0.38	-1.6
4,803,069	-		PfGW456L13_4287	0.38	+0.4
4,803,163	+		PfGW456L13_4287	0.45	-0.9
4,803,163	+		PfGW456L13_4287	0.45	+1.0
4,803,163	+		PfGW456L13_4287	0.45	+0.3
4,803,163	+		PfGW456L13_4287	0.45	-0.1
4,803,163	+		PfGW456L13_4287	0.45	+0.5
4,803,163	+		PfGW456L13_4287	0.45	+0.3
4,803,164	-		PfGW456L13_4287	0.45	-1.7
4,803,169	+		PfGW456L13_4287	0.46	-0.1
4,803,169	+		PfGW456L13_4287	0.46	+2.3
4,803,169	+		PfGW456L13_4287	0.46	+1.0
4,803,169	+		PfGW456L13_4287	0.46	+0.3
4,803,169	+		PfGW456L13_4287	0.46	-0.7
4,803,169	+		PfGW456L13_4287	0.46	-0.8
4,803,169	+		PfGW456L13_4287	0.46	+0.1
4,803,169	+		PfGW456L13_4287	0.46	+0.5
4,803,169	+		PfGW456L13_4287	0.46	-0.1
4,803,169	+		PfGW456L13_4287	0.46	-0.9
4,803,170	-		PfGW456L13_4287	0.46	+1.2
4,803,170	-		PfGW456L13_4287	0.46	+0.9
4,803,170	-		PfGW456L13_4287	0.46	-0.8
4,803,170	-		PfGW456L13_4287	0.46	-2.1
4,803,170	-		PfGW456L13_4287	0.46	+0.0
4,803,170	-		PfGW456L13_4287	0.46	+0.5
4,803,170	-				+1.9
4,803,170	-		PfGW456L13_4287	0.46	-1.1
4,803,170	-		PfGW456L13_4287	0.46	+1.0
4,803,187	+		PfGW456L13_4287	0.47	+1.2
4,803,187	+		PfGW456L13_4287	0.47	-0.7
4,803,188	-		PfGW456L13_4287	0.47	+0.7
4,803,200	+		PfGW456L13_4287	0.48	+0.4
4,803,200	+		PfGW456L13_4287	0.48	-0.3
4,803,253	+		PfGW456L13_4287	0.52	-1.3
4,803,253	+		PfGW456L13_4287	0.52	+0.2
4,803,253	+		PfGW456L13_4287	0.52	-1.2
4,803,253	+		PfGW456L13_4287	0.52	-0.0
4,803,253	+		PfGW456L13_4287	0.52	+2.3
4,803,254	-		PfGW456L13_4287	0.52	+1.4
4,803,254	-		PfGW456L13_4287	0.52	+0.8
4,803,279	-		PfGW456L13_4287	0.54	+0.6
4,803,298	+		PfGW456L13_4287	0.56	+1.2
4,803,298	+		PfGW456L13_4287	0.56	+0.6
4,803,299	-		PfGW456L13_4287	0.56	-1.3
4,803,299	-		PfGW456L13_4287	0.56	-0.9
4,803,299	-		PfGW456L13_4287	0.56	-2.7
4,803,299	-		PfGW456L13_4287	0.56	+0.3
4,803,299	-		PfGW456L13_4287	0.56	+1.5
4,803,418	+		PfGW456L13_4287	0.65	-0.2
4,803,418	+		PfGW456L13_4287	0.65	+0.5
4,803,418	+		PfGW456L13_4287	0.65	+0.1
4,803,418	+		PfGW456L13_4287	0.65	+1.9
4,803,418	+		PfGW456L13_4287	0.65	+0.0
4,803,419	-		PfGW456L13_4287	0.65	-0.5
4,803,419	-		PfGW456L13_4287	0.65	+0.5
4,803,419	-		PfGW456L13_4287	0.65	+0.1
4,803,419	-		PfGW456L13_4287	0.65	-0.2
4,803,482	-		PfGW456L13_4287	0.70	+0.4
4,803,535	+		PfGW456L13_4287	0.74	-2.9
4,803,535	+		PfGW456L13_4287	0.74	-1.4
4,803,535	+		PfGW456L13_4287	0.74	-0.6
4,803,536	-		PfGW456L13_4287	0.74	+0.1
4,803,536	-		PfGW456L13_4287	0.74	+0.1
4,803,573	+		PfGW456L13_4287	0.76	-0.2
4,803,574	-		PfGW456L13_4287	0.77	-0.0
4,803,629	-		PfGW456L13_4287	0.81	-0.6
4,803,663	-		PfGW456L13_4287	0.83	-0.1
4,803,665	-		PfGW456L13_4287	0.83	-0.9
4,803,665	-		PfGW456L13_4287	0.83	-0.0
4,803,712	+		PfGW456L13_4287	0.87	+0.6
4,803,713	-		PfGW456L13_4287	0.87	+1.9
4,803,713	-		PfGW456L13_4287	0.87	+0.4
4,803,734	+		PfGW456L13_4287	0.89	+2.5
4,803,734	+		PfGW456L13_4287	0.89	-0.6
4,803,734	+		PfGW456L13_4287	0.89	+0.7
4,803,817	+				+0.1
4,803,817	+				-0.4
4,803,895	+				+0.1
4,803,895	+				-0.2
4,803,895	+				+0.3
4,803,895	+				-1.1
4,803,898	+				-1.2
4,803,898	+				-0.3
4,803,898	+				+0.5
4,803,986	-				-0.6
4,804,044	+				-0.5
4,804,044	+				-1.1
4,804,044	+				+1.5
4,804,045	-				-0.7
4,804,045	-				-1.0
4,804,045	-				+0.5
4,804,045	-				-1.0
4,804,093	+				-0.6
4,804,093	+				+0.4
4,804,093	+				-0.5
4,804,094	-				+0.3
4,804,094	-				+0.1
4,804,180	+		PfGW456L13_4288	0.15	+0.8
4,804,180	+		PfGW456L13_4288	0.15	+0.4
4,804,180	+		PfGW456L13_4288	0.15	+0.6
4,804,181	-		PfGW456L13_4288	0.16	+0.5
4,804,406	-		PfGW456L13_4288	0.33	-1.2
4,804,406	-		PfGW456L13_4288	0.33	+2.2
4,804,432	+		PfGW456L13_4288	0.36	-1.4
4,804,433	-		PfGW456L13_4288	0.36	+0.9
4,804,556	-		PfGW456L13_4288	0.45	+0.0
4,804,556	-		PfGW456L13_4288	0.45	+1.1
4,804,561	+		PfGW456L13_4288	0.46	-0.7
4,804,561	+		PfGW456L13_4288	0.46	+0.7
4,804,561	+		PfGW456L13_4288	0.46	+0.6
4,804,561	+		PfGW456L13_4288	0.46	+1.3
4,804,561	+		PfGW456L13_4288	0.46	+0.4
4,804,562	-		PfGW456L13_4288	0.46	+0.6
4,804,562	-		PfGW456L13_4288	0.46	-0.2
4,804,562	-		PfGW456L13_4288	0.46	+2.2
4,804,579	+		PfGW456L13_4288	0.47	+0.6
4,804,700	-		PfGW456L13_4288	0.57	-0.2
4,804,700	-		PfGW456L13_4288	0.57	+1.6
4,804,700	-		PfGW456L13_4288	0.57	-0.2
4,804,711	+		PfGW456L13_4288	0.58	-0.6
4,804,711	+		PfGW456L13_4288	0.58	-0.2
4,804,711	+		PfGW456L13_4288	0.58	-0.1
4,804,712	-		PfGW456L13_4288	0.58	+0.5
4,804,712	-		PfGW456L13_4288	0.58	+1.2
4,804,712	-		PfGW456L13_4288	0.58	-0.1
4,804,712	-		PfGW456L13_4288	0.58	-0.0
4,804,712	-		PfGW456L13_4288	0.58	+0.6
4,804,798	+		PfGW456L13_4288	0.65	-0.1
4,804,835	+		PfGW456L13_4288	0.68	+0.4
4,804,837	+		PfGW456L13_4288	0.68	-0.5
4,804,837	+		PfGW456L13_4288	0.68	+0.9
4,804,837	+		PfGW456L13_4288	0.68	+0.8
4,804,838	-		PfGW456L13_4288	0.68	+0.3
4,804,838	-		PfGW456L13_4288	0.68	+0.0
4,804,838	-		PfGW456L13_4288	0.68	+0.5
4,804,838	-		PfGW456L13_4288	0.68	+0.4
4,804,838	-		PfGW456L13_4288	0.68	+0.5
4,804,838	-		PfGW456L13_4288	0.68	-0.2
4,804,838	-		PfGW456L13_4288	0.68	+0.4
4,804,838	-		PfGW456L13_4288	0.68	-0.2
4,804,838	-		PfGW456L13_4288	0.68	+0.9