Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3649

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
4,106,419	+		PfGW456L13_3648	0.30	-4.2
4,106,419	+		PfGW456L13_3648	0.30	-2.4
4,106,420	-		PfGW456L13_3648	0.30	-2.9
4,106,420	-		PfGW456L13_3648	0.30	-1.8
4,106,420	-		PfGW456L13_3648	0.30	-2.4
4,106,545	+		PfGW456L13_3648	0.39	-2.8
4,106,545	+		PfGW456L13_3648	0.39	-3.1
4,106,545	+		PfGW456L13_3648	0.39	-2.7
4,106,546	-		PfGW456L13_3648	0.39	-4.2
4,106,722	+		PfGW456L13_3648	0.52	-2.9
4,106,723	-		PfGW456L13_3648	0.52	-1.6
4,106,734	+		PfGW456L13_3648	0.53	-2.7
4,106,734	+		PfGW456L13_3648	0.53	-2.2
4,106,734	+		PfGW456L13_3648	0.53	-2.4
4,106,763	+		PfGW456L13_3648	0.55	-3.6
4,106,763	+		PfGW456L13_3648	0.55	-3.6
4,106,763	+		PfGW456L13_3648	0.55	-1.0
4,106,763	+		PfGW456L13_3648	0.55	-2.3
4,106,764	-		PfGW456L13_3648	0.55	-2.7
4,106,764	-		PfGW456L13_3648	0.55	-2.2
4,106,764	-		PfGW456L13_3648	0.55	-2.7
4,106,764	-		PfGW456L13_3648	0.55	-2.6
4,106,801	+		PfGW456L13_3648	0.58	-1.9
4,106,801	+		PfGW456L13_3648	0.58	-3.3
4,106,801	+		PfGW456L13_3648	0.58	-3.7
4,106,801	+		PfGW456L13_3648	0.58	-2.7
4,106,801	+		PfGW456L13_3648	0.58	-1.7
4,106,801	+		PfGW456L13_3648	0.58	-3.4
4,106,801	+		PfGW456L13_3648	0.58	-3.1
4,106,801	+		PfGW456L13_3648	0.58	-2.4
4,106,802	-		PfGW456L13_3648	0.58	-2.9
4,106,802	-		PfGW456L13_3648	0.58	-3.5
4,106,802	-		PfGW456L13_3648	0.58	-4.2
4,106,802	-		PfGW456L13_3648	0.58	-2.6
4,106,802	-		PfGW456L13_3648	0.58	-2.7
4,106,802	-		PfGW456L13_3648	0.58	-2.6
4,106,802	-		PfGW456L13_3648	0.58	-1.1
4,106,802	-		PfGW456L13_3648	0.58	-1.2
4,106,802	-		PfGW456L13_3648	0.58	-3.5
4,106,802	-		PfGW456L13_3648	0.58	-2.6
4,106,802	-		PfGW456L13_3648	0.58	-0.8
4,106,802	-		PfGW456L13_3648	0.58	-3.2
4,106,802	-		PfGW456L13_3648	0.58	-4.0
4,106,802	-		PfGW456L13_3648	0.58	-4.2
4,106,802	-		PfGW456L13_3648	0.58	-3.2
4,106,880	+		PfGW456L13_3648	0.64	-2.9
4,106,881	-		PfGW456L13_3648	0.64	-2.9
4,106,998	+		PfGW456L13_3648	0.72	-2.2
4,106,998	+		PfGW456L13_3648	0.72	-3.8
4,106,998	+		PfGW456L13_3648	0.72	-2.2
4,106,998	+		PfGW456L13_3648	0.72	-3.6
4,106,998	+		PfGW456L13_3648	0.72	-0.2
4,106,998	+		PfGW456L13_3648	0.72	-3.1
4,106,998	+		PfGW456L13_3648	0.72	-2.6
4,106,998	+		PfGW456L13_3648	0.72	-2.7
4,106,998	+		PfGW456L13_3648	0.72	-2.2
4,106,998	+		PfGW456L13_3648	0.72	-1.3
4,106,999	-		PfGW456L13_3648	0.72	-2.4
4,106,999	-		PfGW456L13_3648	0.72	-4.2
4,106,999	-		PfGW456L13_3648	0.72	-1.8
4,106,999	-		PfGW456L13_3648	0.72	-2.7
4,106,999	-		PfGW456L13_3648	0.72	-2.7
4,106,999	-		PfGW456L13_3648	0.72	-3.2
4,106,999	-		PfGW456L13_3648	0.72	-3.2
4,106,999	-		PfGW456L13_3648	0.72	-3.8
4,106,999	-		PfGW456L13_3648	0.72	-4.3
4,106,999	-		PfGW456L13_3648	0.72	-1.8
4,106,999	-		PfGW456L13_3648	0.72	-3.6
4,106,999	-		PfGW456L13_3648	0.72	-2.2
4,107,002	+		PfGW456L13_3648	0.73	-1.6
4,107,003	-		PfGW456L13_3648	0.73	-3.9
4,107,003	-		PfGW456L13_3648	0.73	-2.8
4,107,184	+		PfGW456L13_3648	0.86	-2.6
4,107,185	-		PfGW456L13_3648	0.86	-3.9
4,107,185	-		PfGW456L13_3648	0.86	-2.4
4,107,185	-		PfGW456L13_3648	0.86	-3.6
4,107,331	+				-2.1
4,107,470	-				+3.8
4,107,475	-				+5.1
4,107,521	+				-2.1
4,107,521	+				-3.2
4,107,522	-				+3.8
4,107,606	+		PfGW456L13_3649	0.14	-4.9
4,107,607	-		PfGW456L13_3649	0.14	+3.8
4,107,886	+		PfGW456L13_3649	0.35	-2.2
4,107,944	-		PfGW456L13_3649	0.39	+1.1
4,108,212	-		PfGW456L13_3649	0.59	-1.6
4,108,212	-		PfGW456L13_3649	0.59	-3.6
4,108,328	+		PfGW456L13_3649	0.68	-4.3
4,108,328	+		PfGW456L13_3649	0.68	-4.3
4,108,328	+		PfGW456L13_3649	0.68	-1.8
4,108,328	+		PfGW456L13_3649	0.68	-2.2
4,108,328	+		PfGW456L13_3649	0.68	-1.6
4,108,328	+		PfGW456L13_3649	0.68	-2.9
4,108,329	-		PfGW456L13_3649	0.68	-3.5
4,108,329	-		PfGW456L13_3649	0.68	-2.9
4,108,329	-		PfGW456L13_3649	0.68	-2.9
4,108,329	-		PfGW456L13_3649	0.68	-3.6
4,108,329	-		PfGW456L13_3649	0.68	-2.1
4,108,329	-		PfGW456L13_3649	0.68	-3.8
4,108,329	-		PfGW456L13_3649	0.68	-3.6
4,108,329	-		PfGW456L13_3649	0.68	-4.4
4,108,329	-		PfGW456L13_3649	0.68	-3.8
4,108,329	-		PfGW456L13_3649	0.68	-3.9
4,108,329	-		PfGW456L13_3649	0.68	-0.6
4,108,329	-		PfGW456L13_3649	0.68	-2.6
4,108,330	+		PfGW456L13_3649	0.68	-3.9
4,108,330	+		PfGW456L13_3649	0.68	-3.1
4,108,330	+		PfGW456L13_3649	0.68	-3.4
4,108,330	+		PfGW456L13_3649	0.68	-2.8
4,108,330	+		PfGW456L13_3649	0.68	-0.8
4,108,330	+		PfGW456L13_3649	0.68	-3.2
4,108,331	-		PfGW456L13_3649	0.68	-2.6
4,108,331	-		PfGW456L13_3649	0.68	-0.8
4,108,331	-		PfGW456L13_3649	0.68	-2.6
4,108,331	-		PfGW456L13_3649	0.68	-2.6
4,108,331	-		PfGW456L13_3649	0.68	-2.6
4,108,331	-		PfGW456L13_3649	0.68	-3.1
4,108,331	-		PfGW456L13_3649	0.68	-4.6
4,108,364	+		PfGW456L13_3649	0.71	-3.2
4,108,364	+		PfGW456L13_3649	0.71	-3.2
4,108,364	+		PfGW456L13_3649	0.71	-3.6
4,108,364	+		PfGW456L13_3649	0.71	-2.9
4,108,364	+		PfGW456L13_3649	0.71	-4.1
4,108,364	+		PfGW456L13_3649	0.71	-2.9
4,108,365	-		PfGW456L13_3649	0.71	-3.9
4,108,365	-		PfGW456L13_3649	0.71	-3.6
4,108,365	-		PfGW456L13_3649	0.71	-2.2
4,108,365	-		PfGW456L13_3649	0.71	-3.9
4,108,365	-		PfGW456L13_3649	0.71	-3.6
4,108,365	-		PfGW456L13_3649	0.71	-3.1
4,108,422	+				-0.2
4,108,429	+		PfGW456L13_3649	0.76	-2.2
4,108,432	+		PfGW456L13_3649	0.76	-3.6
4,108,432	+		PfGW456L13_3649	0.76	-2.9
4,108,432	+		PfGW456L13_3649	0.76	-0.4
4,108,432	+		PfGW456L13_3649	0.76	-1.6
4,108,432	+		PfGW456L13_3649	0.76	-2.1
4,108,432	+		PfGW456L13_3649	0.76	-3.4
4,108,433	-		PfGW456L13_3649	0.76	-3.8
4,108,433	-		PfGW456L13_3649	0.76	-2.8
4,108,433	-		PfGW456L13_3649	0.76	-3.2
4,108,433	-		PfGW456L13_3649	0.76	-4.6
4,108,433	-		PfGW456L13_3649	0.76	-1.4
4,108,478	-		PfGW456L13_3649	0.79	-2.1
4,108,531	+		PfGW456L13_3649	0.83	-2.7
4,108,531	+		PfGW456L13_3649	0.83	-3.5
4,108,532	-		PfGW456L13_3649	0.83	-3.2
4,108,532	-		PfGW456L13_3649	0.83	-3.6
4,108,593	-		PfGW456L13_3649	0.88	-4.2
4,108,735	+				-1.6
4,108,735	+				-2.2
4,108,736	-				-3.6
4,108,736	-				-3.3
4,108,736	-				-2.1
4,108,755	+				-3.6
4,108,755	+				-4.1
4,108,755	+				-2.8
4,108,755	+				-3.9
4,108,755	+				-4.1
4,108,755	+				-3.5
4,108,755	+				-3.8
4,108,755	+				-3.4
4,108,755	+				-3.2
4,108,755	+				-2.4
4,108,755	+				-1.8
4,108,755	+				-2.8
4,108,755	+				-3.7
4,108,755	+				-3.9
4,108,756	-				-2.1
4,108,756	-				-2.2
4,108,756	-				-4.0
4,108,756	-				-3.5
4,108,756	-				-1.6
4,108,756	-				-4.4
4,108,756	-				-3.9
4,108,756	-				-2.6
4,108,756	-				-3.6
4,108,756	-				-3.6
4,108,756	-				-2.7
4,108,756	-				-1.2
4,108,756	-				-0.3
4,108,756	-				-4.5
4,108,777	+				-4.7
4,108,777	+				-3.5
4,108,777	+				-4.0
4,108,777	+				-4.4
4,108,778	-				+5.0
4,108,778	-				+5.6
4,108,778	-				+5.0
4,108,778	-				+3.9
4,108,778	-				+3.0
4,108,821	-				-0.9
4,108,886	+				+1.2
4,108,886	+				+0.8
4,108,886	+				+0.2
4,108,886	+				+1.4
4,108,886	+				-0.4
4,108,886	+				-0.2
4,108,887	-				+2.6
4,108,887	-				+3.5
4,108,931	+				-0.8
4,108,931	+				-1.6
4,108,931	+				-1.0
4,108,932	-				+4.5
4,108,932	-				+2.4
4,109,013	+				+0.8
4,109,014	-				+3.4
4,109,080	+				+0.6
4,109,081	-				+3.4
4,109,413	+		PfGW456L13_3650	0.20	-0.1
4,109,413	+		PfGW456L13_3650	0.20	+0.8
4,109,413	+				+1.5
4,109,414	-		PfGW456L13_3650	0.21	+0.5
4,109,414	-		PfGW456L13_3650	0.21	+3.4
4,109,414	-		PfGW456L13_3650	0.21	+2.9
4,109,467	+		PfGW456L13_3650	0.25	-0.4
4,109,553	-		PfGW456L13_3650	0.32	+1.7
4,109,567	+		PfGW456L13_3650	0.33	+0.5
4,109,585	+		PfGW456L13_3650	0.35	+2.1
4,109,586	-		PfGW456L13_3650	0.35	+0.6
4,109,659	+		PfGW456L13_3650	0.41	+0.5
4,109,660	-		PfGW456L13_3650	0.41	-0.3
4,109,661	+		PfGW456L13_3650	0.41	-0.3
4,109,699	+		PfGW456L13_3650	0.44	+0.7
4,109,699	+				-0.6
4,109,699	+		PfGW456L13_3650	0.44	+0.8
4,109,699	+		PfGW456L13_3650	0.44	+0.6
4,109,699	+		PfGW456L13_3650	0.44	+0.6
4,109,699	+		PfGW456L13_3650	0.44	+0.5
4,109,699	+		PfGW456L13_3650	0.44	+1.3
4,109,699	+		PfGW456L13_3650	0.44	+0.4
4,109,699	+		PfGW456L13_3650	0.44	+0.7
4,109,700	-		PfGW456L13_3650	0.44	+0.4
4,109,700	-		PfGW456L13_3650	0.44	+0.2
4,109,700	-		PfGW456L13_3650	0.44	+1.9