Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2900

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
3,238,918	+		PfGW456L13_2899	0.39	+0.2
3,238,918	+		PfGW456L13_2899	0.39	-0.1
3,238,918	+		PfGW456L13_2899	0.39	-0.9
3,238,918	+		PfGW456L13_2899	0.39	+0.2
3,238,918	+		PfGW456L13_2899	0.39	+0.2
3,238,919	-		PfGW456L13_2899	0.39	+0.2
3,238,919	-		PfGW456L13_2899	0.39	-0.9
3,238,919	-		PfGW456L13_2899	0.39	+0.4
3,238,919	-		PfGW456L13_2899	0.39	-0.2
3,238,919	-		PfGW456L13_2899	0.39	+0.6
3,238,919	-		PfGW456L13_2899	0.39	-0.1
3,239,244	+		PfGW456L13_2899	0.64	+1.1
3,239,244	+		PfGW456L13_2899	0.64	+0.1
3,239,244	+		PfGW456L13_2899	0.64	+0.3
3,239,244	+		PfGW456L13_2899	0.64	+0.4
3,239,245	-		PfGW456L13_2899	0.64	-0.2
3,239,245	-		PfGW456L13_2899	0.64	+0.7
3,239,245	-		PfGW456L13_2899	0.64	+1.3
3,239,245	-		PfGW456L13_2899	0.64	+1.3
3,239,245	-		PfGW456L13_2899	0.64	+0.8
3,239,245	-		PfGW456L13_2899	0.64	+0.1
3,239,246	+		PfGW456L13_2899	0.64	-0.4
3,239,246	+		PfGW456L13_2899	0.64	+0.5
3,239,246	+		PfGW456L13_2899	0.64	+0.3
3,239,246	+		PfGW456L13_2899	0.64	+0.3
3,239,246	+		PfGW456L13_2899	0.64	+0.6
3,239,246	+		PfGW456L13_2899	0.64	+0.6
3,239,247	-		PfGW456L13_2899	0.64	+0.2
3,239,247	-		PfGW456L13_2899	0.64	-0.4
3,239,247	-		PfGW456L13_2899	0.64	-0.1
3,239,247	-		PfGW456L13_2899	0.64	+1.0
3,239,247	-		PfGW456L13_2899	0.64	-2.3
3,239,247	-				+0.2
3,239,247	-		PfGW456L13_2899	0.64	+1.5
3,239,248	+		PfGW456L13_2899	0.64	-0.8
3,239,248	+		PfGW456L13_2899	0.64	-0.5
3,239,248	+		PfGW456L13_2899	0.64	+0.4
3,239,248	+		PfGW456L13_2899	0.64	+1.1
3,239,248	+		PfGW456L13_2899	0.64	-0.1
3,239,283	+		PfGW456L13_2899	0.67	+0.5
3,239,284	-		PfGW456L13_2899	0.67	+0.9
3,239,284	-		PfGW456L13_2899	0.67	+0.2
3,239,284	-		PfGW456L13_2899	0.67	-0.7
3,239,351	-		PfGW456L13_2899	0.72	-1.3
3,239,359	-		PfGW456L13_2899	0.73	-0.8
3,239,421	-		PfGW456L13_2899	0.78	+0.5
3,239,525	-		PfGW456L13_2899	0.86	+2.3
3,239,535	+		PfGW456L13_2899	0.86	-0.5
3,239,536	-		PfGW456L13_2899	0.87	-0.2
3,239,559	-		PfGW456L13_2899	0.88	+0.5
3,239,596	+				+0.3
3,239,596	+				+0.0
3,239,596	+				+0.2
3,239,597	-				-0.4
3,239,813	-				+1.3
3,239,820	+				+0.7
3,239,820	+				-1.1
3,239,841	+				+0.6
3,239,841	+				-0.4
3,239,841	+				-0.1
3,239,841	+				-0.8
3,239,841	+				+0.1
3,239,841	+				+0.3
3,239,841	+				-0.2
3,239,841	+				+0.1
3,239,841	+				+1.2
3,239,842	-				-0.7
3,239,842	-				+1.1
3,239,842	-				-1.7
3,239,842	-				+0.5
3,239,842	-				-0.2
3,239,842	-				+0.2
3,239,842	-				-0.0
3,239,842	-				+1.3
3,240,072	-				+0.4
3,240,072	-				-0.2
3,240,072	-				+1.1
3,240,072	-				+0.8
3,240,139	+				+0.8
3,240,139	+				+0.2
3,240,140	-				+1.4
3,240,178	+		PfGW456L13_2900	0.11	-0.0
3,240,263	-		PfGW456L13_2900	0.14	+0.2
3,240,314	-		PfGW456L13_2900	0.15	+0.9
3,240,314	-		PfGW456L13_2900	0.15	-0.2
3,240,338	+		PfGW456L13_2900	0.16	-0.0
3,240,338	+		PfGW456L13_2900	0.16	+1.2
3,240,339	-		PfGW456L13_2900	0.16	-0.2
3,240,339	-		PfGW456L13_2900	0.16	+0.8
3,240,339	-		PfGW456L13_2900	0.16	-0.1
3,240,345	+		PfGW456L13_2900	0.16	-1.2
3,240,346	-		PfGW456L13_2900	0.17	+0.6
3,240,504	+		PfGW456L13_2900	0.22	+0.4
3,240,504	+		PfGW456L13_2900	0.22	+0.4
3,240,504	+		PfGW456L13_2900	0.22	+0.2
3,240,505	-		PfGW456L13_2900	0.22	+0.3
3,240,505	-		PfGW456L13_2900	0.22	-0.7
3,240,505	-		PfGW456L13_2900	0.22	+0.1
3,240,505	-		PfGW456L13_2900	0.22	-0.2
3,240,505	-		PfGW456L13_2900	0.22	+4.1
3,240,529	+		PfGW456L13_2900	0.23	+1.4
3,240,558	-		PfGW456L13_2900	0.24	-0.8
3,240,590	+		PfGW456L13_2900	0.25	-1.4
3,240,738	+		PfGW456L13_2900	0.30	+0.3
3,240,738	+		PfGW456L13_2900	0.30	+0.3
3,240,738	+		PfGW456L13_2900	0.30	+0.3
3,240,738	+		PfGW456L13_2900	0.30	+0.6
3,240,738	+		PfGW456L13_2900	0.30	+0.1
3,240,739	-		PfGW456L13_2900	0.30	-1.4
3,240,739	-		PfGW456L13_2900	0.30	+0.2
3,240,739	-		PfGW456L13_2900	0.30	+0.4
3,240,739	-		PfGW456L13_2900	0.30	+0.5
3,240,739	-		PfGW456L13_2900	0.30	+1.2
3,240,753	-		PfGW456L13_2900	0.31	-1.3
3,240,870	+		PfGW456L13_2900	0.35	+0.7
3,240,870	+		PfGW456L13_2900	0.35	-0.3
3,240,870	+		PfGW456L13_2900	0.35	+0.1
3,240,870	+		PfGW456L13_2900	0.35	+0.5
3,240,870	+		PfGW456L13_2900	0.35	+0.6
3,240,870	+				-0.2
3,240,870	+		PfGW456L13_2900	0.35	+0.8
3,240,871	-				+2.4
3,240,871	-		PfGW456L13_2900	0.35	+0.5
3,240,871	-		PfGW456L13_2900	0.35	+0.1
3,240,871	-		PfGW456L13_2900	0.35	-1.7
3,240,871	-		PfGW456L13_2900	0.35	-0.2
3,240,871	-		PfGW456L13_2900	0.35	-0.2
3,240,912	+		PfGW456L13_2900	0.36	-2.0
3,240,912	+		PfGW456L13_2900	0.36	-1.2
3,240,915	+		PfGW456L13_2900	0.37	+0.5
3,240,915	+		PfGW456L13_2900	0.37	-0.2
3,240,916	-		PfGW456L13_2900	0.37	+0.1
3,241,029	+		PfGW456L13_2900	0.41	-0.0
3,241,030	-		PfGW456L13_2900	0.41	+0.4
3,241,448	+		PfGW456L13_2900	0.55	+0.3
3,241,461	+		PfGW456L13_2900	0.56	-0.1
3,241,462	-		PfGW456L13_2900	0.56	-1.0
3,241,462	-		PfGW456L13_2900	0.56	-0.1
3,241,464	+		PfGW456L13_2900	0.56	-0.1
3,241,465	-		PfGW456L13_2900	0.56	-0.3
3,241,530	+		PfGW456L13_2900	0.58	+2.2
3,241,530	+		PfGW456L13_2900	0.58	+0.1
3,241,530	+		PfGW456L13_2900	0.58	+0.2
3,241,530	+		PfGW456L13_2900	0.58	+0.7
3,241,531	-		PfGW456L13_2900	0.58	-2.4
3,241,551	+		PfGW456L13_2900	0.59	-1.0
3,241,551	+		PfGW456L13_2900	0.59	+0.0
3,241,552	-		PfGW456L13_2900	0.59	-1.3
3,241,552	-		PfGW456L13_2900	0.59	+0.3
3,241,602	+		PfGW456L13_2900	0.61	+0.2
3,241,602	+		PfGW456L13_2900	0.61	-0.7
3,241,602	+		PfGW456L13_2900	0.61	-0.8
3,241,602	+		PfGW456L13_2900	0.61	-0.1
3,241,602	+		PfGW456L13_2900	0.61	+0.9
3,241,602	+		PfGW456L13_2900	0.61	+0.8
3,241,603	-		PfGW456L13_2900	0.61	+0.2
3,241,608	+		PfGW456L13_2900	0.61	+0.4
3,241,726	-		PfGW456L13_2900	0.65	+0.7
3,241,726	-		PfGW456L13_2900	0.65	-0.4
3,241,726	-		PfGW456L13_2900	0.65	+0.1
3,241,832	+		PfGW456L13_2900	0.69	+0.7
3,241,887	+		PfGW456L13_2900	0.71	-0.8
3,241,887	+		PfGW456L13_2900	0.71	+0.1
3,241,888	-		PfGW456L13_2900	0.71	+0.5
3,241,949	-		PfGW456L13_2900	0.73	-1.6
3,241,949	-		PfGW456L13_2900	0.73	+1.3
3,242,007	+		PfGW456L13_2900	0.75	-0.7
3,242,008	-		PfGW456L13_2900	0.75	-0.1
3,242,008	-		PfGW456L13_2900	0.75	-0.9
3,242,008	-		PfGW456L13_2900	0.75	-0.1
3,242,008	-		PfGW456L13_2900	0.75	+0.2
3,242,008	-		PfGW456L13_2900	0.75	-0.8
3,242,008	-		PfGW456L13_2900	0.75	+0.5
3,242,016	+		PfGW456L13_2900	0.75	-0.2
3,242,016	+		PfGW456L13_2900	0.75	+0.5
3,242,016	+		PfGW456L13_2900	0.75	-0.6
3,242,016	+		PfGW456L13_2900	0.75	-0.3
3,242,016	+		PfGW456L13_2900	0.75	-0.5
3,242,016	+		PfGW456L13_2900	0.75	+0.1
3,242,017	-		PfGW456L13_2900	0.75	-2.5
3,242,017	-		PfGW456L13_2900	0.75	-0.2
3,242,017	-		PfGW456L13_2900	0.75	+1.9
3,242,017	-		PfGW456L13_2900	0.75	+1.0
3,242,017	-		PfGW456L13_2900	0.75	-0.0
3,242,017	-		PfGW456L13_2900	0.75	-2.0
3,242,217	+		PfGW456L13_2900	0.82	+0.2
3,242,217	+		PfGW456L13_2900	0.82	-0.9
3,242,218	-		PfGW456L13_2900	0.82	+0.4
3,242,672	-				+0.7
3,242,720	+				-0.4
3,242,720	+				+0.5
3,242,721	-				-1.2
3,242,752	+				+0.6
3,242,753	-				+1.7
3,242,754	+				-0.8
3,242,754	+				-0.3
3,242,754	+				+0.7
3,242,754	+				+2.2
3,242,755	-				+0.3
3,242,755	-				+1.4
3,242,755	-				+0.7
3,242,755	-				-0.1
3,242,778	-				+2.1
3,242,897	+				-0.1
3,242,897	+				+0.9
3,242,922	+				+0.0
3,242,922	+				-0.7
3,242,922	+				+0.1
3,242,923	-				+1.4
3,242,923	-				-0.9
3,242,923	-				-0.2
3,242,930	+				+1.1
3,242,973	+				+0.3
3,242,974	-				-1.3
3,242,974	-				+1.1
3,242,974	-				-2.2
3,242,976	-				-0.9
3,242,976	-				+0.0
3,243,038	+				-1.1
3,243,039	-				-2.5
3,243,039	-				+0.2
3,243,089	+				-0.2
3,243,089	+				+0.5
3,243,119	+				-0.0
3,243,119	+				+0.8
3,243,145	+				-1.3
3,243,146	-				-0.4
3,243,146	-				-1.1
3,243,174	+				+0.2
3,243,422	+		PfGW456L13_2901	0.24	+1.4
3,243,422	+		PfGW456L13_2901	0.24	+1.9
3,243,422	+		PfGW456L13_2901	0.24	+0.7
3,243,422	+		PfGW456L13_2901	0.24	+0.2
3,243,422	+		PfGW456L13_2901	0.24	+0.6
3,243,423	-		PfGW456L13_2901	0.24	-1.1
3,243,425	+		PfGW456L13_2901	0.24	+0.6
3,243,425	+		PfGW456L13_2901	0.24	+0.3
3,243,425	+		PfGW456L13_2901	0.24	+0.2
3,243,425	+		PfGW456L13_2901	0.24	+1.2
3,243,425	+		PfGW456L13_2901	0.24	+0.8
3,243,425	+		PfGW456L13_2901	0.24	-0.8
3,243,425	+		PfGW456L13_2901	0.24	+0.4
3,243,425	+		PfGW456L13_2901	0.24	+0.3
3,243,425	+		PfGW456L13_2901	0.24	-0.4
3,243,425	+		PfGW456L13_2901	0.24	+0.4
3,243,425	+		PfGW456L13_2901	0.24	+1.0
3,243,425	+		PfGW456L13_2901	0.24	-0.0
3,243,426	-		PfGW456L13_2901	0.24	+1.0
3,243,426	-		PfGW456L13_2901	0.24	+1.2
3,243,426	-		PfGW456L13_2901	0.24	-0.4
3,243,426	-		PfGW456L13_2901	0.24	+0.5
3,243,426	-		PfGW456L13_2901	0.24	+1.1
3,243,426	-		PfGW456L13_2901	0.24	-0.1
3,243,426	-		PfGW456L13_2901	0.24	+0.9
3,243,426	-		PfGW456L13_2901	0.24	-0.7
3,243,426	-		PfGW456L13_2901	0.24	+0.3