Experiment: D-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2631 and PfGW456L13_2632 are separated by 72 nucleotides
PfGW456L13_2631 - NADH-ubiquinone oxidoreductase chain C (EC 1.6.5.3) / NADH-ubiquinone oxidoreductase chain D (EC 1.6.5.3), at 2,929,278 to 2,931,062
_2631
PfGW456L13_2632 - NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3), at 2,931,135 to 2,931,809
_2632
Position (kb)
2931
2932 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2930.779 kb on + strand, within PfGW456L13_2631 at 2930.780 kb on - strand, within PfGW456L13_2631 at 2930.858 kb on - strand, within PfGW456L13_2631 at 2931.041 kb on - strand at 2931.066 kb on + strand at 2931.066 kb on + strand at 2931.071 kb on - strand at 2931.089 kb on - strand at 2931.089 kb on - strand at 2931.114 kb on + strand at 2931.115 kb on - strand at 2931.115 kb on - strand at 2931.220 kb on + strand, within PfGW456L13_2632 at 2931.383 kb on - strand, within PfGW456L13_2632 at 2931.604 kb on + strand, within PfGW456L13_2632 at 2931.628 kb on + strand, within PfGW456L13_2632 at 2931.723 kb on + strand, within PfGW456L13_2632 at 2931.889 kb on + strand at 2931.890 kb on - strand at 2931.893 kb on + strand at 2931.920 kb on - strand at 2932.071 kb on + strand at 2932.075 kb on + strand at 2932.326 kb on + strand at 2932.371 kb on + strand at 2932.388 kb on - strand at 2932.448 kb on + strand at 2932.466 kb on + strand at 2932.467 kb on - strand at 2932.475 kb on + strand at 2932.475 kb on + strand at 2932.475 kb on + strand at 2932.475 kb on + strand at 2932.475 kb on + strand at 2932.475 kb on + strand at 2932.476 kb on - strand at 2932.476 kb on - strand at 2932.476 kb on - strand at 2932.476 kb on - strand at 2932.476 kb on - strand at 2932.518 kb on + strand at 2932.527 kb on + strand at 2932.555 kb on + strand at 2932.555 kb on + strand at 2932.555 kb on + strand at 2932.555 kb on + strand at 2932.555 kb on + strand at 2932.555 kb on + strand at 2932.555 kb on + strand at 2932.556 kb on - strand at 2932.556 kb on - strand at 2932.556 kb on - strand at 2932.556 kb on - strand at 2932.556 kb on - strand at 2932.556 kb on - strand at 2932.556 kb on - strand at 2932.557 kb on + strand at 2932.557 kb on + strand at 2932.557 kb on + strand at 2932.557 kb on + strand at 2932.557 kb on + strand at 2932.558 kb on - strand at 2932.558 kb on - strand at 2932.558 kb on - strand at 2932.567 kb on - strand at 2932.575 kb on + strand at 2932.576 kb on - strand at 2932.615 kb on + strand at 2932.753 kb on + strand at 2932.754 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (C) remove 2,930,779 + PfGW456L13_2631 0.84 +1.1 2,930,780 - PfGW456L13_2631 0.84 +2.6 2,930,858 - PfGW456L13_2631 0.89 -2.3 2,931,041 - -0.3 2,931,066 + -0.3 2,931,066 + +0.5 2,931,071 - +1.1 2,931,089 - +1.3 2,931,089 - +0.3 2,931,114 + -0.1 2,931,115 - -1.2 2,931,115 - -1.5 2,931,220 + PfGW456L13_2632 0.13 -0.6 2,931,383 - PfGW456L13_2632 0.37 +0.3 2,931,604 + PfGW456L13_2632 0.69 -1.9 2,931,628 + PfGW456L13_2632 0.73 -0.4 2,931,723 + PfGW456L13_2632 0.87 -0.1 2,931,889 + -1.0 2,931,890 - +1.4 2,931,893 + -0.5 2,931,920 - -0.6 2,932,071 + +0.4 2,932,075 + +1.5 2,932,326 + +0.9 2,932,371 + -0.0 2,932,388 - -0.7 2,932,448 + +0.8 2,932,466 + +1.1 2,932,467 - +1.3 2,932,475 + +0.1 2,932,475 + +0.2 2,932,475 + +0.7 2,932,475 + -0.9 2,932,475 + -1.6 2,932,475 + +0.6 2,932,476 - -0.4 2,932,476 - -0.6 2,932,476 - -0.7 2,932,476 - -0.7 2,932,476 - -1.9 2,932,518 + +0.2 2,932,527 + +1.3 2,932,555 + +0.2 2,932,555 + +0.7 2,932,555 + +2.1 2,932,555 + -0.4 2,932,555 + +0.4 2,932,555 + +1.2 2,932,555 + -0.4 2,932,556 - +1.2 2,932,556 - -2.9 2,932,556 - -1.9 2,932,556 - +0.1 2,932,556 - -0.1 2,932,556 - +0.1 2,932,556 - -1.6 2,932,557 + -1.7 2,932,557 + -0.1 2,932,557 + -0.6 2,932,557 + -1.9 2,932,557 + +0.6 2,932,558 - -0.1 2,932,558 - +0.2 2,932,558 - -0.9 2,932,567 - -1.4 2,932,575 + +0.7 2,932,576 - -0.3 2,932,615 + +0.6 2,932,753 + +1.2 2,932,754 - +0.3
Or see this region's nucleotide sequence