Experiment: D-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2033 and PfGW456L13_2034 overlap by 4 nucleotides PfGW456L13_2034 and PfGW456L13_2035 overlap by 21 nucleotides
PfGW456L13_2033 - 23S rRNA (Uracil-5-) -methyltransferase RumA (EC 2.1.1.-) ## LSU rRNA m(5)U1939, at 2,235,945 to 2,237,297
_2033
PfGW456L13_2034 - hypothetical protein, at 2,237,294 to 2,237,440
_2034
PfGW456L13_2035 - GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2), at 2,237,420 to 2,239,663
_2035
Position (kb)
2237
2238 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2236.492 kb on + strand, within PfGW456L13_2033 at 2236.493 kb on - strand, within PfGW456L13_2033 at 2236.687 kb on + strand, within PfGW456L13_2033 at 2236.687 kb on + strand, within PfGW456L13_2033 at 2236.688 kb on - strand, within PfGW456L13_2033 at 2236.688 kb on - strand, within PfGW456L13_2033 at 2236.688 kb on - strand, within PfGW456L13_2033 at 2236.770 kb on + strand, within PfGW456L13_2033 at 2236.992 kb on - strand, within PfGW456L13_2033 at 2237.134 kb on + strand, within PfGW456L13_2033 at 2237.154 kb on + strand, within PfGW456L13_2033 at 2237.154 kb on + strand, within PfGW456L13_2033 at 2237.154 kb on + strand, within PfGW456L13_2033 at 2237.154 kb on + strand, within PfGW456L13_2033 at 2237.154 kb on + strand, within PfGW456L13_2033 at 2237.154 kb on + strand, within PfGW456L13_2033 at 2237.154 kb on + strand, within PfGW456L13_2033 at 2237.154 kb on + strand, within PfGW456L13_2033 at 2237.155 kb on - strand, within PfGW456L13_2033 at 2237.155 kb on - strand, within PfGW456L13_2033 at 2237.155 kb on - strand, within PfGW456L13_2033 at 2237.155 kb on - strand, within PfGW456L13_2033 at 2237.155 kb on - strand, within PfGW456L13_2033 at 2237.155 kb on - strand, within PfGW456L13_2033 at 2237.155 kb on - strand, within PfGW456L13_2033 at 2237.155 kb on - strand, within PfGW456L13_2033 at 2237.243 kb on + strand at 2237.243 kb on + strand at 2237.244 kb on - strand at 2237.295 kb on + strand at 2237.295 kb on + strand at 2237.296 kb on - strand at 2237.296 kb on - strand at 2237.404 kb on - strand, within PfGW456L13_2034 at 2237.412 kb on + strand, within PfGW456L13_2034 at 2237.412 kb on + strand, within PfGW456L13_2034 at 2237.413 kb on - strand, within PfGW456L13_2034 at 2237.424 kb on + strand at 2237.425 kb on - strand at 2237.464 kb on + strand at 2237.547 kb on - strand at 2237.603 kb on - strand at 2237.603 kb on - strand at 2237.603 kb on - strand at 2237.690 kb on + strand, within PfGW456L13_2035 at 2237.690 kb on + strand, within PfGW456L13_2035 at 2237.996 kb on + strand, within PfGW456L13_2035 at 2237.996 kb on + strand, within PfGW456L13_2035 at 2237.997 kb on - strand, within PfGW456L13_2035 at 2237.997 kb on - strand, within PfGW456L13_2035 at 2237.997 kb on - strand, within PfGW456L13_2035 at 2237.997 kb on - strand, within PfGW456L13_2035 at 2237.997 kb on - strand, within PfGW456L13_2035 at 2237.997 kb on - strand, within PfGW456L13_2035 at 2237.997 kb on - strand, within PfGW456L13_2035 at 2238.032 kb on - strand, within PfGW456L13_2035 at 2238.065 kb on + strand, within PfGW456L13_2035 at 2238.083 kb on + strand, within PfGW456L13_2035 at 2238.084 kb on - strand, within PfGW456L13_2035 at 2238.084 kb on - strand, within PfGW456L13_2035 at 2238.084 kb on - strand, within PfGW456L13_2035 at 2238.084 kb on - strand, within PfGW456L13_2035 at 2238.221 kb on + strand, within PfGW456L13_2035 at 2238.221 kb on + strand, within PfGW456L13_2035 at 2238.222 kb on - strand, within PfGW456L13_2035 at 2238.222 kb on - strand, within PfGW456L13_2035 at 2238.222 kb on - strand, within PfGW456L13_2035 at 2238.272 kb on + strand, within PfGW456L13_2035 at 2238.273 kb on - strand, within PfGW456L13_2035 at 2238.273 kb on - strand, within PfGW456L13_2035 at 2238.273 kb on - strand, within PfGW456L13_2035 at 2238.320 kb on + strand, within PfGW456L13_2035 at 2238.380 kb on + strand, within PfGW456L13_2035 at 2238.380 kb on + strand, within PfGW456L13_2035 at 2238.381 kb on - strand, within PfGW456L13_2035 at 2238.381 kb on - strand, within PfGW456L13_2035
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (C) remove 2,236,492 + PfGW456L13_2033 0.40 -0.5 2,236,493 - PfGW456L13_2033 0.41 -1.4 2,236,687 + PfGW456L13_2033 0.55 +0.9 2,236,687 + PfGW456L13_2033 0.55 +1.0 2,236,688 - PfGW456L13_2033 0.55 +0.1 2,236,688 - PfGW456L13_2033 0.55 -1.5 2,236,688 - PfGW456L13_2033 0.55 -1.1 2,236,770 + PfGW456L13_2033 0.61 +0.5 2,236,992 - PfGW456L13_2033 0.77 +1.0 2,237,134 + PfGW456L13_2033 0.88 -0.0 2,237,154 + PfGW456L13_2033 0.89 -1.2 2,237,154 + PfGW456L13_2033 0.89 +1.6 2,237,154 + PfGW456L13_2033 0.89 +0.6 2,237,154 + PfGW456L13_2033 0.89 -0.4 2,237,154 + PfGW456L13_2033 0.89 -0.6 2,237,154 + PfGW456L13_2033 0.89 -1.0 2,237,154 + PfGW456L13_2033 0.89 +0.7 2,237,154 + PfGW456L13_2033 0.89 +0.1 2,237,155 - PfGW456L13_2033 0.89 -1.9 2,237,155 - PfGW456L13_2033 0.89 -1.3 2,237,155 - PfGW456L13_2033 0.89 -3.3 2,237,155 - PfGW456L13_2033 0.89 -3.2 2,237,155 - PfGW456L13_2033 0.89 -2.7 2,237,155 - PfGW456L13_2033 0.89 -3.7 2,237,155 - PfGW456L13_2033 0.89 -2.4 2,237,155 - PfGW456L13_2033 0.89 -4.1 2,237,243 + +0.7 2,237,243 + -0.3 2,237,244 - -1.3 2,237,295 + -1.0 2,237,295 + +0.7 2,237,296 - -2.9 2,237,296 - -1.5 2,237,404 - PfGW456L13_2034 0.75 -0.3 2,237,412 + PfGW456L13_2034 0.80 -4.2 2,237,412 + PfGW456L13_2034 0.80 -2.2 2,237,413 - PfGW456L13_2034 0.81 -1.0 2,237,424 + -3.2 2,237,425 - -1.3 2,237,464 + -3.9 2,237,547 - -3.3 2,237,603 - -2.3 2,237,603 - -2.6 2,237,603 - -4.4 2,237,690 + PfGW456L13_2035 0.12 -4.3 2,237,690 + PfGW456L13_2035 0.12 -3.3 2,237,996 + PfGW456L13_2035 0.26 -0.6 2,237,996 + PfGW456L13_2035 0.26 -3.5 2,237,997 - PfGW456L13_2035 0.26 -2.8 2,237,997 - PfGW456L13_2035 0.26 -2.8 2,237,997 - PfGW456L13_2035 0.26 -0.6 2,237,997 - PfGW456L13_2035 0.26 -4.5 2,237,997 - PfGW456L13_2035 0.26 -3.4 2,237,997 - PfGW456L13_2035 0.26 -2.0 2,237,997 - PfGW456L13_2035 0.26 -3.0 2,238,032 - PfGW456L13_2035 0.27 -3.1 2,238,065 + PfGW456L13_2035 0.29 -2.5 2,238,083 + PfGW456L13_2035 0.30 -3.5 2,238,084 - PfGW456L13_2035 0.30 -2.0 2,238,084 - PfGW456L13_2035 0.30 -3.8 2,238,084 - PfGW456L13_2035 0.30 -2.0 2,238,084 - PfGW456L13_2035 0.30 -2.7 2,238,221 + PfGW456L13_2035 0.36 -1.8 2,238,221 + PfGW456L13_2035 0.36 -3.3 2,238,222 - PfGW456L13_2035 0.36 -4.5 2,238,222 - PfGW456L13_2035 0.36 -2.6 2,238,222 - PfGW456L13_2035 0.36 -1.0 2,238,272 + PfGW456L13_2035 0.38 -2.8 2,238,273 - PfGW456L13_2035 0.38 -4.2 2,238,273 - PfGW456L13_2035 0.38 -3.2 2,238,273 - PfGW456L13_2035 0.38 -2.9 2,238,320 + PfGW456L13_2035 0.40 -2.0 2,238,380 + PfGW456L13_2035 0.43 -1.8 2,238,380 + PfGW456L13_2035 0.43 -2.5 2,238,381 - PfGW456L13_2035 0.43 -2.8 2,238,381 - PfGW456L13_2035 0.43 -2.7
Or see this region's nucleotide sequence