Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1007

Experiment: D-Serine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Serine (C)
1,118,676	+		PfGW456L13_1005	0.26	+0.5
1,118,676	+		PfGW456L13_1005	0.26	+0.3
1,118,677	-		PfGW456L13_1005	0.27	-0.3
1,118,677	-		PfGW456L13_1005	0.27	-0.6
1,118,677	-		PfGW456L13_1005	0.27	+0.0
1,118,677	-		PfGW456L13_1005	0.27	+0.3
1,118,677	-		PfGW456L13_1005	0.27	-0.1
1,118,677	-		PfGW456L13_1005	0.27	+1.1
1,118,677	-		PfGW456L13_1005	0.27	-0.6
1,118,677	-		PfGW456L13_1005	0.27	-2.9
1,118,677	-		PfGW456L13_1005	0.27	+0.3
1,118,679	+		PfGW456L13_1005	0.27	+0.9
1,118,679	+		PfGW456L13_1005	0.27	-0.8
1,118,679	+		PfGW456L13_1005	0.27	-1.3
1,118,679	+		PfGW456L13_1005	0.27	+0.9
1,118,679	+		PfGW456L13_1005	0.27	+0.8
1,118,679	+		PfGW456L13_1005	0.27	-0.1
1,118,679	+		PfGW456L13_1005	0.27	-1.9
1,118,680	-		PfGW456L13_1005	0.27	-0.3
1,118,680	-		PfGW456L13_1005	0.27	-2.4
1,118,721	+		PfGW456L13_1005	0.37	+0.1
1,118,721	+		PfGW456L13_1005	0.37	+0.2
1,118,721	+		PfGW456L13_1005	0.37	+1.7
1,118,721	+		PfGW456L13_1005	0.37	+0.7
1,118,722	-		PfGW456L13_1005	0.37	-0.0
1,118,722	-		PfGW456L13_1005	0.37	+0.0
1,118,722	-		PfGW456L13_1005	0.37	+0.1
1,118,722	-		PfGW456L13_1005	0.37	-1.6
1,118,862	+		PfGW456L13_1005	0.69	+0.6
1,118,863	-		PfGW456L13_1005	0.69	-0.3
1,118,863	-		PfGW456L13_1005	0.69	+3.3
1,118,863	-		PfGW456L13_1005	0.69	-0.1
1,118,863	-		PfGW456L13_1005	0.69	-0.5
1,118,863	-		PfGW456L13_1005	0.69	+0.3
1,118,863	-		PfGW456L13_1005	0.69	-0.1
1,118,863	-		PfGW456L13_1005	0.69	+0.8
1,118,883	+		PfGW456L13_1005	0.74	+1.1
1,118,883	+		PfGW456L13_1005	0.74	-0.1
1,118,883	+		PfGW456L13_1005	0.74	+1.3
1,118,884	-		PfGW456L13_1005	0.74	-0.4
1,118,884	-		PfGW456L13_1005	0.74	-0.2
1,118,884	-		PfGW456L13_1005	0.74	-0.0
1,118,884	-		PfGW456L13_1005	0.74	-0.4
1,118,884	-		PfGW456L13_1005	0.74	+1.6
1,118,884	-		PfGW456L13_1005	0.74	-1.5
1,118,884	-		PfGW456L13_1005	0.74	+0.1
1,118,972	+				-0.0
1,118,973	-				+0.3
1,118,973	-				+2.3
1,118,984	+				-0.6
1,119,013	+				-0.2
1,119,013	+				-1.4
1,119,014	-				+0.7
1,119,068	+				-4.1
1,119,068	+				-3.7
1,119,069	-				-3.4
1,119,069	-				-2.9
1,119,069	-				-2.7
1,119,072	+				-3.8
1,119,073	-				-2.4
1,119,085	+		PfGW456L13_1006	0.10	-0.4
1,119,086	-		PfGW456L13_1006	0.10	-3.0
1,119,093	+		PfGW456L13_1006	0.11	-2.1
1,119,100	+		PfGW456L13_1006	0.13	-3.7
1,119,100	+		PfGW456L13_1006	0.13	-0.4
1,119,100	+		PfGW456L13_1006	0.13	-4.0
1,119,100	+		PfGW456L13_1006	0.13	-2.8
1,119,100	+		PfGW456L13_1006	0.13	-2.2
1,119,101	-		PfGW456L13_1006	0.13	-2.0
1,119,101	-		PfGW456L13_1006	0.13	-3.6
1,119,101	-		PfGW456L13_1006	0.13	-3.4
1,119,101	-		PfGW456L13_1006	0.13	-0.3
1,119,227	+		PfGW456L13_1006	0.33	-3.4
1,119,236	+		PfGW456L13_1006	0.34	-2.9
1,119,281	+		PfGW456L13_1006	0.42	-4.3
1,119,658	+				-4.0
1,119,658	+				-3.8
1,119,658	+				-4.1
1,119,658	+				-1.3
1,119,659	-				-0.3
1,119,659	-				+0.1
1,119,672	+				-2.3
1,119,672	+				-2.5
1,119,672	+				-3.3
1,119,672	+				-1.0
1,119,672	+				-3.2
1,119,672	+				-3.5
1,119,673	-				-2.2
1,119,673	-				-1.3
1,119,673	-				-2.3
1,119,673	-				-0.9
1,119,673	-				-3.8
1,119,673	-				-3.5
1,119,912	+		PfGW456L13_1007	0.23	-3.3
1,119,939	+		PfGW456L13_1007	0.25	-4.4
1,119,990	+		PfGW456L13_1007	0.30	-1.7
1,119,990	+		PfGW456L13_1007	0.30	-3.5
1,119,990	+		PfGW456L13_1007	0.30	-3.6
1,119,990	+		PfGW456L13_1007	0.30	-2.5
1,120,026	+		PfGW456L13_1007	0.33	-3.3
1,120,027	-		PfGW456L13_1007	0.33	-1.8
1,120,027	-		PfGW456L13_1007	0.33	-1.7
1,120,027	-		PfGW456L13_1007	0.33	-3.2
1,120,089	+		PfGW456L13_1007	0.39	-2.7
1,120,089	+		PfGW456L13_1007	0.39	-4.6
1,120,089	+		PfGW456L13_1007	0.39	-3.7
1,120,089	+		PfGW456L13_1007	0.39	-3.9
1,120,089	+		PfGW456L13_1007	0.39	-2.8
1,120,090	-		PfGW456L13_1007	0.39	-3.9
1,120,090	-		PfGW456L13_1007	0.39	-2.8
1,120,281	+		PfGW456L13_1007	0.55	-2.0
1,120,281	+		PfGW456L13_1007	0.55	-2.2
1,120,281	+		PfGW456L13_1007	0.55	-4.6
1,120,281	+		PfGW456L13_1007	0.55	-2.9
1,120,282	-		PfGW456L13_1007	0.55	-3.3
1,120,282	-		PfGW456L13_1007	0.55	-1.1
1,120,282	-		PfGW456L13_1007	0.55	-2.5
1,120,406	+		PfGW456L13_1007	0.66	-3.3
1,120,665	+		PfGW456L13_1007	0.89	-3.7
1,120,665	+		PfGW456L13_1007	0.89	-2.3
1,120,666	-		PfGW456L13_1007	0.89	-0.7
1,120,666	-		PfGW456L13_1007	0.89	-3.3
1,120,666	-		PfGW456L13_1007	0.89	-2.9
1,120,674	+		PfGW456L13_1007	0.90	-2.8
1,120,674	+		PfGW456L13_1007	0.90	-2.8
1,120,674	+		PfGW456L13_1007	0.90	-2.7
1,120,674	+		PfGW456L13_1007	0.90	-4.2
1,120,675	-		PfGW456L13_1007	0.90	-3.7
1,120,675	-		PfGW456L13_1007	0.90	-3.5
1,120,675	-		PfGW456L13_1007	0.90	-4.1
1,120,686	+				-3.3
1,120,687	-				-3.2
1,120,752	-				-2.1
1,120,817	+				-3.2
1,120,817	+				-3.6
1,120,817	+				-2.2
1,120,817	+				-2.4
1,120,817	+				-1.6
1,120,818	-				-0.6
1,120,818	-				+0.5
1,120,818	-				+0.3
1,120,818	-				-0.3
1,120,818	-				-0.3
1,120,823	+				-1.7
1,120,824	-				+1.0
1,120,824	-				-0.1
1,121,119	+		PfGW456L13_1008	0.50	+0.3
1,121,119	+		PfGW456L13_1008	0.50	-0.3
1,121,119	+		PfGW456L13_1008	0.50	-0.4
1,121,119	+		PfGW456L13_1008	0.50	+0.2
1,121,120	-		PfGW456L13_1008	0.50	+0.2
1,121,120	-		PfGW456L13_1008	0.50	+0.4
1,121,120	-		PfGW456L13_1008	0.50	+0.5
1,121,467	-		PfGW456L13_1009	0.33	-0.6
1,121,678	-		PfGW456L13_1009	0.69	-0.0
1,121,753	+		PfGW456L13_1009	0.81	-0.8
1,121,753	+		PfGW456L13_1009	0.81	-0.3
1,121,754	-		PfGW456L13_1009	0.82	-1.5
1,121,779	+		PfGW456L13_1009	0.86	-2.2