Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS29750

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
6,610,685	-		PFLU_RS29745	0.66	-2.7
6,610,921	+				+1.1
6,610,921	+				-1.6
6,610,921	+				+0.4
6,610,921	+				-0.9
6,610,921	+				-0.7
6,610,922	-				-3.6
6,610,922	-				-1.4
6,610,922	-				+0.7
6,610,922	-				+0.0
6,610,922	-				-1.7
6,610,922	-				-2.7
6,610,922	-				+0.1
6,610,922	-				+1.4
6,610,922	-				-1.5
6,610,980	+				+0.2
6,610,980	+				+0.3
6,610,980	+				+1.7
6,610,980	+				+1.4
6,610,980	+				-3.5
6,610,980	+				+0.9
6,610,981	-				+1.0
6,610,981	-				-2.9
6,610,981	-				+0.7
6,610,981	-				-0.3
6,610,981	-				-0.4
6,610,981	-				-1.8
6,610,981	-				-1.9
6,610,981	-				-1.4
6,610,981	-				+0.8
6,610,981	-				-2.2
6,610,991	+				+0.6
6,610,991	+				-0.1
6,610,992	-				+0.8
6,610,992	-				+1.7
6,611,011	+				-1.3
6,611,011	+				-0.8
6,611,011	+				+0.3
6,611,012	-				+0.8
6,611,012	-				-0.3
6,611,012	-				+0.8
6,611,013	+				-0.4
6,611,090	-				+1.2
6,611,165	+				+1.6
6,611,165	+				-0.2
6,611,165	+				+1.5
6,611,165	+				-0.8
6,611,165	+				+2.3
6,611,165	+				-2.4
6,611,165	+				+1.1
6,611,165	+				+1.0
6,611,165	+				-1.5
6,611,165	+				+0.3
6,611,165	+				-0.6
6,611,165	+				-4.1
6,611,165	+				-1.0
6,611,165	+				-0.3
6,611,165	+				-1.4
6,611,165	+				-0.2
6,611,165	+				-0.8
6,611,165	+				-1.7
6,611,166	-				+0.5
6,611,166	-				+0.2
6,611,166	-				-1.2
6,611,166	-				-1.2
6,611,166	-				-0.7
6,611,166	-				-1.9
6,611,169	+				-1.5
6,611,170	-				+1.6
6,611,170	-				-0.6
6,611,170	-				+1.8
6,611,254	+		PFLU_RS29750	0.12	-2.6
6,611,254	+		PFLU_RS29750	0.12	-2.8
6,611,254	+		PFLU_RS29750	0.12	-1.7
6,611,255	-		PFLU_RS29750	0.12	-1.8
6,611,276	+		PFLU_RS29750	0.15	-3.3
6,611,276	+		PFLU_RS29750	0.15	-2.6
6,611,276	+		PFLU_RS29750	0.15	-1.1
6,611,276	+		PFLU_RS29750	0.15	+1.4
6,611,276	+		PFLU_RS29750	0.15	-3.2
6,611,277	-		PFLU_RS29750	0.15	-4.0
6,611,277	-		PFLU_RS29750	0.15	-2.6
6,611,277	-		PFLU_RS29750	0.15	-2.0
6,611,277	-		PFLU_RS29750	0.15	-1.9
6,611,277	-		PFLU_RS29750	0.15	+1.2
6,611,295	+		PFLU_RS29750	0.17	+0.4
6,611,295	+		PFLU_RS29750	0.17	-0.6
6,611,299	-		PFLU_RS29750	0.18	+1.4
6,611,364	+		PFLU_RS29750	0.26	-0.2
6,611,365	-		PFLU_RS29750	0.26	+1.4
6,611,387	+		PFLU_RS29750	0.29	+1.4
6,611,388	-		PFLU_RS29750	0.29	-0.6
6,611,388	-		PFLU_RS29750	0.29	+0.4
6,611,388	-		PFLU_RS29750	0.29	+0.8
6,611,417	+		PFLU_RS29750	0.33	+0.4
6,611,418	-		PFLU_RS29750	0.33	-0.4
6,611,418	-		PFLU_RS29750	0.33	+2.4
6,611,418	-		PFLU_RS29750	0.33	+0.8
6,611,442	-		PFLU_RS29750	0.36	+0.4
6,611,442	-		PFLU_RS29750	0.36	-0.4
6,611,920	-				+0.4
6,612,018	+				+2.6
6,612,018	+				+0.6
6,612,018	+				-0.7
6,612,018	+				+3.0
6,612,018	+				-0.2
6,612,018	+				-2.1
6,612,018	+				-1.2
6,612,018	+				+1.9
6,612,018	+				+1.6
6,612,019	-				-0.8
6,612,019	-				+1.2
6,612,019	-				+0.6
6,612,019	-				+3.7
6,612,019	-				-1.0
6,612,019	-				+1.1
6,612,093	+		PFLU_RS29755	0.12	+1.1
6,612,093	+		PFLU_RS29755	0.12	+2.0
6,612,093	+		PFLU_RS29755	0.12	+0.3
6,612,093	+		PFLU_RS29755	0.12	-0.4
6,612,093	+		PFLU_RS29755	0.12	+0.9
6,612,093	+		PFLU_RS29755	0.12	+0.6
6,612,093	+		PFLU_RS29755	0.12	+3.5
6,612,093	+		PFLU_RS29755	0.12	-1.9
6,612,093	+		PFLU_RS29755	0.12	+2.1
6,612,093	+		PFLU_RS29755	0.12	+0.3
6,612,093	+		PFLU_RS29755	0.12	+1.9
6,612,093	+		PFLU_RS29755	0.12	-2.8
6,612,093	+		PFLU_RS29755	0.12	+2.3
6,612,093	+		PFLU_RS29755	0.12	+0.9
6,612,093	+		PFLU_RS29755	0.12	-2.0
6,612,093	+		PFLU_RS29755	0.12	+1.9
6,612,093	+		PFLU_RS29755	0.12	-0.2
6,612,094	-		PFLU_RS29755	0.12	-1.2
6,612,094	-		PFLU_RS29755	0.12	+3.7
6,612,094	-		PFLU_RS29755	0.12	-0.8
6,612,094	-		PFLU_RS29755	0.12	+2.4
6,612,094	-		PFLU_RS29755	0.12	+2.0
6,612,094	-		PFLU_RS29755	0.12	+2.2
6,612,094	-		PFLU_RS29755	0.12	+1.1
6,612,094	-		PFLU_RS29755	0.12	+0.2
6,612,094	-		PFLU_RS29755	0.12	+0.1
6,612,094	-		PFLU_RS29755	0.12	+0.8
6,612,094	-		PFLU_RS29755	0.12	-0.2
6,612,094	-		PFLU_RS29755	0.12	+2.6
6,612,094	-		PFLU_RS29755	0.12	+0.5
6,612,094	-		PFLU_RS29755	0.12	+2.8
6,612,094	-		PFLU_RS29755	0.12	-2.1
6,612,108	+		PFLU_RS29755	0.13	+1.1
6,612,109	-		PFLU_RS29755	0.14	+0.9
6,612,180	+		PFLU_RS29755	0.22	+2.1
6,612,180	+		PFLU_RS29755	0.22	+1.6
6,612,180	+		PFLU_RS29755	0.22	-0.1
6,612,181	-		PFLU_RS29755	0.22	-2.2
6,612,181	-		PFLU_RS29755	0.22	+1.5
6,612,181	-		PFLU_RS29755	0.22	+2.2
6,612,181	-		PFLU_RS29755	0.22	+1.9
6,612,181	-		PFLU_RS29755	0.22	-1.8
6,612,181	-		PFLU_RS29755	0.22	-0.2
6,612,271	+		PFLU_RS29755	0.33	+1.8
6,612,272	-		PFLU_RS29755	0.33	+2.5
6,612,422	-		PFLU_RS29755	0.51	-2.2
6,612,432	+		PFLU_RS29755	0.52	+2.2
6,612,432	+		PFLU_RS29755	0.52	-0.4
6,612,432	+		PFLU_RS29755	0.52	+0.4
6,612,433	-		PFLU_RS29755	0.52	-0.5
6,612,433	-		PFLU_RS29755	0.52	-0.0
6,612,433	-		PFLU_RS29755	0.52	+3.4
6,612,433	-		PFLU_RS29755	0.52	+1.8
6,612,532	-		PFLU_RS29755	0.64	+3.3
6,612,532	-		PFLU_RS29755	0.64	+2.5
6,612,711	+		PFLU_RS29755	0.86	-0.7
6,612,711	+		PFLU_RS29755	0.86	-0.3
6,612,712	-		PFLU_RS29755	0.86	+0.7
6,612,714	+		PFLU_RS29755	0.86	+1.3
6,612,714	+		PFLU_RS29755	0.86	-1.9
6,612,714	+		PFLU_RS29755	0.86	+2.4
6,612,715	-		PFLU_RS29755	0.86	+4.9
6,612,715	-		PFLU_RS29755	0.86	-0.7
6,612,715	-		PFLU_RS29755	0.86	+1.9
6,612,715	-		PFLU_RS29755	0.86	-1.9
6,612,715	-		PFLU_RS29755	0.86	+0.3
6,612,899	+				+0.4
6,612,899	+				+1.7
6,612,899	+				-0.6
6,612,899	+				+1.1
6,612,900	-				+1.7
6,612,900	-				-1.9
6,612,900	-				-1.0
6,612,900	-				-0.6
6,612,900	-				+0.9
6,612,917	+				+0.4