Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28775

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
6,400,094	+		PFLU_RS28770	0.39	+1.6
6,400,094	+		PFLU_RS28770	0.39	-0.9
6,400,094	+		PFLU_RS28770	0.39	-1.6
6,400,094	+		PFLU_RS28770	0.39	-1.2
6,400,094	+		PFLU_RS28770	0.39	+0.1
6,400,094	+		PFLU_RS28770	0.39	-3.4
6,400,094	+		PFLU_RS28770	0.39	-0.5
6,400,094	+		PFLU_RS28770	0.39	-2.0
6,400,094	+		PFLU_RS28770	0.39	+2.6
6,400,094	+		PFLU_RS28770	0.39	-2.4
6,400,095	-		PFLU_RS28770	0.39	+3.6
6,400,095	-		PFLU_RS28770	0.39	+3.4
6,400,095	-		PFLU_RS28770	0.39	+4.6
6,400,095	-		PFLU_RS28770	0.39	+2.9
6,400,095	-		PFLU_RS28770	0.39	+0.5
6,400,095	-		PFLU_RS28770	0.39	+1.7
6,400,095	-		PFLU_RS28770	0.39	+4.0
6,400,095	-		PFLU_RS28770	0.39	+3.4
6,400,095	-		PFLU_RS28770	0.39	+1.7
6,400,112	+		PFLU_RS28770	0.41	-1.8
6,400,112	+		PFLU_RS28770	0.41	-0.7
6,400,112	+		PFLU_RS28770	0.41	-0.6
6,400,112	+		PFLU_RS28770	0.41	-0.8
6,400,112	+		PFLU_RS28770	0.41	-0.9
6,400,112	+		PFLU_RS28770	0.41	-0.3
6,400,113	-		PFLU_RS28770	0.41	+0.1
6,400,113	-		PFLU_RS28770	0.41	+0.7
6,400,113	-		PFLU_RS28770	0.41	+0.6
6,400,121	+		PFLU_RS28770	0.41	-0.5
6,400,121	+		PFLU_RS28770	0.41	-3.2
6,400,121	+		PFLU_RS28770	0.41	+0.6
6,400,121	+		PFLU_RS28770	0.41	-2.1
6,400,121	+		PFLU_RS28770	0.41	-1.5
6,400,121	+		PFLU_RS28770	0.41	+0.4
6,400,122	-		PFLU_RS28770	0.42	+1.0
6,400,122	-		PFLU_RS28770	0.42	-0.3
6,400,160	+		PFLU_RS28770	0.45	-1.0
6,400,161	-		PFLU_RS28770	0.45	+1.6
6,400,161	-		PFLU_RS28770	0.45	-0.4
6,400,199	+		PFLU_RS28770	0.49	+0.8
6,400,199	+		PFLU_RS28770	0.49	+0.0
6,400,199	+		PFLU_RS28770	0.49	-1.3
6,400,199	+		PFLU_RS28770	0.49	-1.1
6,400,199	+		PFLU_RS28770	0.49	-0.1
6,400,199	+		PFLU_RS28770	0.49	-1.7
6,400,199	+		PFLU_RS28770	0.49	+1.1
6,400,199	+		PFLU_RS28770	0.49	-1.1
6,400,199	+		PFLU_RS28770	0.49	-1.2
6,400,199	+		PFLU_RS28770	0.49	-2.9
6,400,199	+		PFLU_RS28770	0.49	-3.2
6,400,199	+		PFLU_RS28770	0.49	-1.5
6,400,199	+		PFLU_RS28770	0.49	-1.4
6,400,199	+		PFLU_RS28770	0.49	-2.0
6,400,199	+		PFLU_RS28770	0.49	-1.4
6,400,199	+		PFLU_RS28770	0.49	-1.3
6,400,199	+		PFLU_RS28770	0.49	+2.1
6,400,200	-		PFLU_RS28770	0.49	+0.1
6,400,200	-		PFLU_RS28770	0.49	+0.7
6,400,200	-		PFLU_RS28770	0.49	+2.2
6,400,200	-		PFLU_RS28770	0.49	+0.5
6,400,200	-		PFLU_RS28770	0.49	-0.5
6,400,200	-		PFLU_RS28770	0.49	+0.2
6,400,200	-		PFLU_RS28770	0.49	+1.9
6,400,200	-		PFLU_RS28770	0.49	+2.7
6,400,200	-		PFLU_RS28770	0.49	+1.8
6,400,200	-		PFLU_RS28770	0.49	-1.7
6,400,200	-		PFLU_RS28770	0.49	+1.2
6,400,200	-		PFLU_RS28770	0.49	+1.8
6,400,200	-		PFLU_RS28770	0.49	+0.5
6,400,349	+		PFLU_RS28770	0.62	-2.2
6,400,350	-		PFLU_RS28770	0.62	+1.7
6,400,350	-		PFLU_RS28770	0.62	+1.4
6,400,376	+		PFLU_RS28770	0.65	+1.3
6,400,388	+		PFLU_RS28770	0.66	-1.6
6,400,388	+		PFLU_RS28770	0.66	+1.0
6,400,389	-		PFLU_RS28770	0.66	-0.2
6,400,389	-		PFLU_RS28770	0.66	+0.5
6,400,448	+		PFLU_RS28770	0.71	-0.3
6,400,448	+		PFLU_RS28770	0.71	+0.4
6,400,448	+		PFLU_RS28770	0.71	-0.8
6,400,539	-		PFLU_RS28770	0.80	+1.2
6,400,598	+		PFLU_RS28770	0.85	-1.6
6,400,598	+		PFLU_RS28770	0.85	-2.5
6,400,598	+		PFLU_RS28770	0.85	+1.1
6,400,598	+		PFLU_RS28770	0.85	-0.6
6,400,598	+		PFLU_RS28770	0.85	+1.2
6,400,599	-		PFLU_RS28770	0.85	+1.2
6,400,599	-		PFLU_RS28770	0.85	+0.6
6,400,599	-		PFLU_RS28770	0.85	+1.9
6,400,599	-		PFLU_RS28770	0.85	+0.8
6,400,655	+				-1.4
6,400,668	+				-0.8
6,400,668	+				+1.9
6,400,669	-				-3.3
6,400,669	-				+1.0
6,400,670	+				+0.2
6,400,670	+				-2.2
6,400,670	+				-0.8
6,400,670	+				-2.5
6,400,670	+				-2.0
6,400,671	-				+0.5
6,400,671	-				-2.0
6,400,671	-				-2.8
6,400,671	-				+0.2
6,400,671	-				-0.6
6,400,671	-				+1.7
6,400,671	-				+1.0
6,400,671	-				-1.3
6,400,674	+				-2.4
6,400,674	+				+0.4
6,400,674	+				-1.1
6,400,674	+				+1.7
6,400,674	+				-2.4
6,400,674	+				-2.5
6,400,674	+				-3.7
6,400,674	+				-2.3
6,400,674	+				-0.5
6,400,674	+				-2.6
6,400,675	-				-1.6
6,400,675	-				-1.1
6,400,675	-				-2.6
6,400,675	-				+0.4
6,400,675	-				+1.5
6,400,675	-				+1.8
6,400,675	-				-1.6
6,400,675	-				-0.4
6,400,675	-				-0.3
6,400,716	+				-2.6
6,400,717	-				+0.5
6,400,717	-				+1.0
6,400,775	+				+0.9
6,400,775	+				+0.5
6,400,776	-				+2.7
6,400,776	-				+3.2
6,400,776	-				+1.0
6,400,776	-				+2.4
6,400,779	+				+1.3
6,400,779	+				-0.6
6,400,780	-				+2.6
6,400,780	-				+1.1
6,400,780	-				+4.6
6,400,780	-				+4.5
6,400,780	-				+5.0
6,400,791	-				+0.9
6,400,827	+				-1.8
6,400,828	-				+2.4
6,400,866	+				-1.2
6,400,866	+				+0.0
6,400,866	+				-0.5
6,400,866	+				-3.1
6,400,866	+				+0.7
6,400,866	+				-1.8
6,400,866	+				+0.3
6,400,867	-				+0.2
6,400,867	-				+4.2
6,400,867	-				+1.4
6,400,867	-				+4.2
6,401,004	+				-3.6
6,401,004	+				-2.2
6,401,004	+				-1.4
6,401,005	-				+0.4
6,401,005	-				+4.4
6,401,079	+				+0.2
6,401,080	-				-0.4
6,401,080	-				-0.2
6,401,080	-				+2.4
6,401,080	-				-0.2
6,401,080	-				+0.9
6,401,080	-				+0.8
6,401,109	+				-2.5
6,401,109	+				-1.3
6,401,180	+		PFLU_RS28775	0.16	-2.6
6,401,180	+		PFLU_RS28775	0.16	-2.3
6,401,181	-		PFLU_RS28775	0.16	-0.9
6,401,181	-		PFLU_RS28775	0.16	-0.9
6,401,181	-		PFLU_RS28775	0.16	-0.9
6,401,181	-		PFLU_RS28775	0.16	-0.9
6,401,181	-		PFLU_RS28775	0.16	+0.4
6,401,181	-		PFLU_RS28775	0.16	-0.9
6,401,181	-		PFLU_RS28775	0.16	-1.6
6,401,181	-		PFLU_RS28775	0.16	+1.5
6,401,204	+		PFLU_RS28775	0.18	-2.2
6,401,204	+		PFLU_RS28775	0.18	-4.3
6,401,205	-		PFLU_RS28775	0.18	-1.7
6,401,223	+		PFLU_RS28775	0.20	+1.7
6,401,223	+		PFLU_RS28775	0.20	+2.6
6,401,223	+		PFLU_RS28775	0.20	-2.8
6,401,223	+		PFLU_RS28775	0.20	-3.1
6,401,223	+		PFLU_RS28775	0.20	-1.6
6,401,223	+		PFLU_RS28775	0.20	-1.6
6,401,223	+		PFLU_RS28775	0.20	-2.9
6,401,224	-		PFLU_RS28775	0.20	-2.4
6,401,224	-		PFLU_RS28775	0.20	-1.1
6,401,224	-		PFLU_RS28775	0.20	-1.2
6,401,224	-		PFLU_RS28775	0.20	-3.0
6,401,224	-		PFLU_RS28775	0.20	-0.6
6,401,224	-		PFLU_RS28775	0.20	-3.0
6,401,224	-		PFLU_RS28775	0.20	+0.1
6,401,224	-		PFLU_RS28775	0.20	-1.1
6,401,224	-		PFLU_RS28775	0.20	+2.4
6,401,224	-		PFLU_RS28775	0.20	-0.6
6,401,266	+		PFLU_RS28775	0.24	-2.2
6,401,267	-		PFLU_RS28775	0.24	-2.6
6,401,319	+		PFLU_RS28775	0.29	-2.6
6,401,319	+		PFLU_RS28775	0.29	+0.6
6,401,320	-		PFLU_RS28775	0.29	-2.1
6,401,430	+		PFLU_RS28775	0.39	-2.4
6,401,430	+		PFLU_RS28775	0.39	-2.9
6,401,430	+		PFLU_RS28775	0.39	-1.2
6,401,430	+		PFLU_RS28775	0.39	-0.9
6,401,430	+		PFLU_RS28775	0.39	-1.3
6,401,430	+		PFLU_RS28775	0.39	-2.8
6,401,430	+		PFLU_RS28775	0.39	-3.6
6,401,430	+		PFLU_RS28775	0.39	-3.9
6,401,430	+		PFLU_RS28775	0.39	-2.7
6,401,430	+		PFLU_RS28775	0.39	-3.1
6,401,431	-		PFLU_RS28775	0.39	-2.8
6,401,431	-		PFLU_RS28775	0.39	-3.5
6,401,431	-		PFLU_RS28775	0.39	+1.1
6,401,431	-		PFLU_RS28775	0.39	-2.4
6,401,431	-		PFLU_RS28775	0.39	-0.4
6,401,431	-		PFLU_RS28775	0.39	-1.7
6,401,431	-		PFLU_RS28775	0.39	-2.5
6,401,431	-		PFLU_RS28775	0.39	-2.8
6,401,431	-		PFLU_RS28775	0.39	-1.5
6,401,449	-		PFLU_RS28775	0.41	-0.8
6,401,535	+		PFLU_RS28775	0.49	+2.6
6,401,535	+		PFLU_RS28775	0.49	-1.8
6,401,535	+		PFLU_RS28775	0.49	-3.9
6,401,536	-		PFLU_RS28775	0.49	-1.8
6,401,536	-		PFLU_RS28775	0.49	-1.4
6,401,685	+		PFLU_RS28775	0.62	-3.6
6,401,712	+		PFLU_RS28775	0.65	-2.6
6,401,712	+		PFLU_RS28775	0.65	+0.1
6,401,713	-		PFLU_RS28775	0.65	-3.4
6,401,713	-		PFLU_RS28775	0.65	-3.7
6,401,713	-		PFLU_RS28775	0.65	-0.3
6,401,784	+		PFLU_RS28775	0.71	-1.4
6,401,784	+		PFLU_RS28775	0.71	-3.3
6,401,785	-		PFLU_RS28775	0.71	-1.4
6,401,785	-		PFLU_RS28775	0.71	-4.2
6,401,817	+		PFLU_RS28775	0.74	-3.0
6,401,818	-		PFLU_RS28775	0.74	+0.1
6,401,861	+		PFLU_RS28775	0.78	-0.6
6,401,861	+		PFLU_RS28775	0.78	-2.1
6,401,862	-		PFLU_RS28775	0.78	-3.3
6,401,934	+		PFLU_RS28775	0.85	-3.3
6,401,934	+		PFLU_RS28775	0.85	-1.2
6,401,934	+		PFLU_RS28775	0.85	-1.7
6,401,934	+		PFLU_RS28775	0.85	-2.6
6,401,935	-		PFLU_RS28775	0.85	-3.1
6,401,935	-		PFLU_RS28775	0.85	-2.7
6,401,935	-		PFLU_RS28775	0.85	-1.9
6,401,991	+				-2.0
6,401,991	+				-1.3
6,401,991	+				+0.3
6,401,992	-				-2.4
6,401,992	-				-3.2
6,402,006	+				-3.8
6,402,006	+				-0.9
6,402,007	-				-1.5
6,402,007	-				-0.5
6,402,023	-				-0.8
6,402,101	+				-1.6
6,402,101	+				-1.4
6,402,102	-				+0.2
6,402,102	-				-2.9
6,402,102	-				-2.2
6,402,102	-				-1.4
6,402,152	+				-1.1
6,402,152	+				-2.2
6,402,152	+				-0.1
6,402,152	+				+0.1
6,402,152	+				-1.0
6,402,152	+				-2.2
6,402,152	+				-2.6
6,402,153	-				+1.7
6,402,153	-				+1.1
6,402,153	-				+3.9
6,402,153	-				+2.2
6,402,153	-				+0.5
6,402,153	-				+4.0
6,402,240	+				-3.2
6,402,240	+				+0.1
6,402,240	+				-1.1
6,402,240	+				+0.6
6,402,240	+				-0.2
6,402,240	+				+0.4
6,402,240	+				-2.6
6,402,240	+				-0.2
6,402,240	+				+1.0
6,402,240	+				+0.3
6,402,240	+				+0.4
6,402,240	+				+1.0
6,402,241	-				+3.7
6,402,241	-				+2.5
6,402,241	-				+2.5
6,402,241	-				+3.6
6,402,241	-				-0.7
6,402,241	-				+3.5
6,402,241	-				+1.7
6,402,241	-				+2.2
6,402,241	-				-0.6
6,402,241	-				+3.7
6,402,241	-				+3.2
6,402,242	+				-3.3
6,402,242	+				+0.7
6,402,243	-				-0.1
6,402,243	-				+5.1
6,402,243	-				+3.0
6,402,287	+				+1.0
6,402,287	+				-1.1
6,402,288	-				-0.8
6,402,288	-				+0.4
6,402,288	-				+2.6
6,402,294	+				+2.3
6,402,295	-				+3.0
6,402,295	-				+3.3
6,402,295	-				+1.3
6,402,591	+		PFLU_RS28780	0.22	+1.3
6,402,591	+		PFLU_RS28780	0.22	+1.8
6,402,592	-		PFLU_RS28780	0.22	+2.9
6,402,592	-		PFLU_RS28780	0.22	+2.2
6,402,592	-		PFLU_RS28780	0.22	+2.2
6,402,690	+		PFLU_RS28780	0.29	-0.4
6,402,774	+		PFLU_RS28780	0.35	+1.8
6,402,774	+		PFLU_RS28780	0.35	+2.0
6,402,774	+		PFLU_RS28780	0.35	-1.3
6,402,774	+		PFLU_RS28780	0.35	+1.0
6,402,774	+		PFLU_RS28780	0.35	+1.9
6,402,774	+		PFLU_RS28780	0.35	-1.9
6,402,775	-		PFLU_RS28780	0.35	+1.7
6,402,775	-		PFLU_RS28780	0.35	+2.3
6,402,775	-		PFLU_RS28780	0.35	+2.0
6,402,775	-		PFLU_RS28780	0.35	+0.8
6,402,775	-		PFLU_RS28780	0.35	+4.1
6,402,825	+		PFLU_RS28780	0.39	-1.2
6,402,825	+		PFLU_RS28780	0.39	-0.2
6,402,826	-		PFLU_RS28780	0.39	-1.4
6,402,900	+		PFLU_RS28780	0.44	+1.3
6,402,901	-		PFLU_RS28780	0.45	+1.7
6,402,933	+		PFLU_RS28780	0.47	+0.2
6,402,933	+		PFLU_RS28780	0.47	+1.4
6,402,933	+		PFLU_RS28780	0.47	-1.6
6,402,934	-		PFLU_RS28780	0.47	+2.4