Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28760

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
6,396,595	+				-0.4
6,396,595	+				-1.2
6,396,595	+				-0.1
6,396,596	-				+0.8
6,396,596	-				-2.4
6,397,095	+		PFLU_RS28755	0.49	-2.9
6,397,096	-		PFLU_RS28755	0.49	-1.9
6,397,096	-		PFLU_RS28755	0.49	-0.7
6,397,099	+		PFLU_RS28755	0.50	-0.3
6,397,099	+		PFLU_RS28755	0.50	-2.5
6,397,099	+		PFLU_RS28755	0.50	-0.9
6,397,099	+		PFLU_RS28755	0.50	-3.1
6,397,099	+		PFLU_RS28755	0.50	-0.1
6,397,099	+		PFLU_RS28755	0.50	-2.8
6,397,099	+		PFLU_RS28755	0.50	-1.2
6,397,099	+		PFLU_RS28755	0.50	-2.4
6,397,099	+		PFLU_RS28755	0.50	-1.2
6,397,100	-		PFLU_RS28755	0.50	+0.1
6,397,100	-		PFLU_RS28755	0.50	-2.8
6,397,100	-		PFLU_RS28755	0.50	-0.7
6,397,100	-		PFLU_RS28755	0.50	-2.5
6,397,100	-		PFLU_RS28755	0.50	-2.2
6,397,100	-		PFLU_RS28755	0.50	-2.1
6,397,100	-		PFLU_RS28755	0.50	-0.8
6,397,310	+		PFLU_RS28755	0.73	-1.1
6,397,311	-		PFLU_RS28755	0.74	-0.2
6,397,339	+		PFLU_RS28755	0.77	-1.8
6,397,340	-		PFLU_RS28755	0.77	-0.9
6,397,340	-		PFLU_RS28755	0.77	+0.6
6,397,340	-		PFLU_RS28755	0.77	-2.5
6,397,405	+		PFLU_RS28755	0.84	-0.1
6,397,405	+		PFLU_RS28755	0.84	-3.5
6,397,405	+		PFLU_RS28755	0.84	+1.7
6,397,405	+		PFLU_RS28755	0.84	-2.4
6,397,405	+		PFLU_RS28755	0.84	-0.8
6,397,405	+		PFLU_RS28755	0.84	-2.8
6,397,405	+		PFLU_RS28755	0.84	+0.3
6,397,406	-		PFLU_RS28755	0.84	+2.4
6,397,406	-		PFLU_RS28755	0.84	-0.6
6,397,406	-		PFLU_RS28755	0.84	-0.2
6,397,406	-		PFLU_RS28755	0.84	-2.2
6,397,406	-		PFLU_RS28755	0.84	-0.1
6,397,462	+				-1.6
6,397,489	+				-0.9
6,397,489	+				-3.3
6,397,489	+				-2.6
6,397,489	+				-0.2
6,397,489	+				-1.9
6,397,489	+				-1.6
6,397,489	+				-1.5
6,397,489	+				-3.7
6,397,489	+				-0.0
6,397,490	-				-2.8
6,397,490	-				-2.3
6,397,544	+				+0.1
6,397,544	+				-2.7
6,397,544	+				-0.5
6,397,544	+				-2.1
6,397,545	-				+0.9
6,397,545	-				-1.4
6,397,545	-				-1.1
6,397,545	-				-1.4
6,397,545	-				-0.3
6,397,682	-		PFLU_RS28760	0.15	-1.8
6,397,748	-		PFLU_RS28760	0.22	-0.4
6,397,884	+		PFLU_RS28760	0.37	-2.2
6,397,885	-		PFLU_RS28760	0.37	-3.2
6,397,911	+		PFLU_RS28760	0.40	-2.8
6,397,917	+		PFLU_RS28760	0.41	-1.9
6,397,917	+		PFLU_RS28760	0.41	-0.5
6,397,917	+		PFLU_RS28760	0.41	-1.2
6,397,917	+		PFLU_RS28760	0.41	-0.2
6,397,932	+		PFLU_RS28760	0.42	-3.1
6,397,932	+		PFLU_RS28760	0.42	-1.7
6,397,932	+		PFLU_RS28760	0.42	+0.6
6,397,932	+		PFLU_RS28760	0.42	-0.4
6,397,932	+		PFLU_RS28760	0.42	-2.8
6,397,932	+		PFLU_RS28760	0.42	-1.4
6,397,932	+		PFLU_RS28760	0.42	-3.2
6,397,933	-		PFLU_RS28760	0.43	-1.3
6,397,933	-		PFLU_RS28760	0.43	-2.5
6,397,933	-		PFLU_RS28760	0.43	-2.5
6,397,933	-		PFLU_RS28760	0.43	+0.8
6,397,933	-		PFLU_RS28760	0.43	-1.9
6,397,933	-		PFLU_RS28760	0.43	-0.6
6,397,933	-		PFLU_RS28760	0.43	-3.2
6,398,040	+		PFLU_RS28760	0.54	-0.9
6,398,040	+		PFLU_RS28760	0.54	-3.6
6,398,041	-		PFLU_RS28760	0.54	-2.8
6,398,041	-		PFLU_RS28760	0.54	-1.5
6,398,041	-		PFLU_RS28760	0.54	-0.2
6,398,130	+		PFLU_RS28760	0.64	-1.8
6,398,130	+		PFLU_RS28760	0.64	-2.6
6,398,131	-		PFLU_RS28760	0.64	-0.0
6,398,131	-		PFLU_RS28760	0.64	-2.8
6,398,200	-		PFLU_RS28760	0.72	-2.8
6,398,211	+		PFLU_RS28760	0.73	-3.5
6,398,212	-		PFLU_RS28760	0.73	+1.2
6,398,212	-		PFLU_RS28760	0.73	-1.4
6,398,212	-		PFLU_RS28760	0.73	-0.4
6,398,212	-		PFLU_RS28760	0.73	-0.6
6,398,212	-		PFLU_RS28760	0.73	-2.3
6,398,238	+		PFLU_RS28760	0.76	-2.2
6,398,238	+		PFLU_RS28760	0.76	-1.2
6,398,238	+		PFLU_RS28760	0.76	-3.4
6,398,238	+		PFLU_RS28760	0.76	-1.5
6,398,238	+		PFLU_RS28760	0.76	-1.7
6,398,239	-		PFLU_RS28760	0.76	-3.2
6,398,280	+		PFLU_RS28760	0.80	-0.5
6,398,280	+		PFLU_RS28760	0.80	-2.5
6,398,280	+		PFLU_RS28760	0.80	-0.3
6,398,280	+		PFLU_RS28760	0.80	-0.7
6,398,280	+		PFLU_RS28760	0.80	-1.1
6,398,280	+		PFLU_RS28760	0.80	+1.3
6,398,280	+		PFLU_RS28760	0.80	-1.8
6,398,280	+		PFLU_RS28760	0.80	-1.8
6,398,280	+		PFLU_RS28760	0.80	-2.8
6,398,280	+		PFLU_RS28760	0.80	-2.6
6,398,280	+		PFLU_RS28760	0.80	+0.0
6,398,281	-		PFLU_RS28760	0.80	-3.3
6,398,281	-		PFLU_RS28760	0.80	-2.5
6,398,281	-		PFLU_RS28760	0.80	-1.8
6,398,281	-		PFLU_RS28760	0.80	-1.9
6,398,281	-		PFLU_RS28760	0.80	-1.2
6,398,281	-		PFLU_RS28760	0.80	-0.8
6,398,281	-		PFLU_RS28760	0.80	-1.3
6,398,281	-		PFLU_RS28760	0.80	-3.6
6,398,281	-		PFLU_RS28760	0.80	+1.0
6,398,281	-		PFLU_RS28760	0.80	-2.0
6,398,281	-		PFLU_RS28760	0.80	-1.8
6,398,281	-		PFLU_RS28760	0.80	-2.7
6,398,281	-		PFLU_RS28760	0.80	-1.2
6,398,286	+		PFLU_RS28760	0.81	-0.8
6,398,286	+		PFLU_RS28760	0.81	-2.2
6,398,286	+		PFLU_RS28760	0.81	-2.4
6,398,286	+		PFLU_RS28760	0.81	-0.9
6,398,286	+		PFLU_RS28760	0.81	-2.6
6,398,286	+		PFLU_RS28760	0.81	-1.4
6,398,286	+		PFLU_RS28760	0.81	-2.8
6,398,286	+		PFLU_RS28760	0.81	-0.8
6,398,286	+		PFLU_RS28760	0.81	-2.6
6,398,286	+		PFLU_RS28760	0.81	+0.2
6,398,286	+		PFLU_RS28760	0.81	-3.0
6,398,286	+		PFLU_RS28760	0.81	-0.6
6,398,286	+		PFLU_RS28760	0.81	+0.2
6,398,286	+		PFLU_RS28760	0.81	-2.6
6,398,286	+		PFLU_RS28760	0.81	-3.1
6,398,286	+		PFLU_RS28760	0.81	-3.2
6,398,286	+		PFLU_RS28760	0.81	-1.7
6,398,287	-		PFLU_RS28760	0.81	-2.0
6,398,287	-		PFLU_RS28760	0.81	-0.6
6,398,287	-		PFLU_RS28760	0.81	-4.0
6,398,287	-		PFLU_RS28760	0.81	-2.7
6,398,287	-		PFLU_RS28760	0.81	-2.8
6,398,287	-		PFLU_RS28760	0.81	-2.0
6,398,287	-		PFLU_RS28760	0.81	-1.5
6,398,287	-		PFLU_RS28760	0.81	-1.8
6,398,298	+		PFLU_RS28760	0.82	-1.8
6,398,423	+				-1.9
6,398,424	-				-2.6
6,398,424	-				+0.5
6,398,455	+				+0.7
6,398,455	+				-2.5
6,398,455	+				-1.2
6,398,456	-				-1.9
6,398,470	+				-2.9
6,398,471	-				-1.7
6,398,501	+				+0.5
6,398,501	+				-0.2
6,398,501	+				-2.1
6,398,501	+				+0.4
6,398,501	+				+0.1
6,398,501	+				-0.4
6,398,501	+				-2.9
6,398,501	+				-1.3
6,398,502	-				-0.8
6,398,502	-				+0.8
6,398,591	+		PFLU_RS28765	0.12	-3.4
6,398,591	+		PFLU_RS28765	0.12	-0.8
6,398,591	+		PFLU_RS28765	0.12	-1.5
6,398,591	+		PFLU_RS28765	0.12	-2.6
6,398,591	+		PFLU_RS28765	0.12	-2.2
6,398,591	+		PFLU_RS28765	0.12	-2.8
6,398,592	-		PFLU_RS28765	0.12	-1.3
6,398,592	-		PFLU_RS28765	0.12	-2.9
6,398,592	-		PFLU_RS28765	0.12	+0.1
6,398,592	-		PFLU_RS28765	0.12	+0.1
6,398,592	-		PFLU_RS28765	0.12	-2.5
6,398,592	-		PFLU_RS28765	0.12	-2.4
6,398,592	-		PFLU_RS28765	0.12	-3.0
6,398,592	-		PFLU_RS28765	0.12	-1.9
6,398,592	-		PFLU_RS28765	0.12	-1.5
6,398,705	+		PFLU_RS28765	0.22	+0.1
6,398,705	+		PFLU_RS28765	0.22	-1.6
6,398,706	-		PFLU_RS28765	0.22	-0.7
6,398,706	-		PFLU_RS28765	0.22	-0.4
6,398,706	-		PFLU_RS28765	0.22	-2.1
6,398,706	-		PFLU_RS28765	0.22	-2.1
6,398,753	+		PFLU_RS28765	0.26	-1.7
6,398,753	+		PFLU_RS28765	0.26	-2.8
6,398,753	+		PFLU_RS28765	0.26	+1.5
6,398,753	+		PFLU_RS28765	0.26	-3.0
6,398,753	+		PFLU_RS28765	0.26	-1.6
6,398,754	-		PFLU_RS28765	0.26	-1.6
6,398,754	-		PFLU_RS28765	0.26	-2.3
6,398,754	-		PFLU_RS28765	0.26	-0.8
6,398,754	-		PFLU_RS28765	0.26	-2.7
6,398,754	-		PFLU_RS28765	0.26	-3.4
6,398,754	-		PFLU_RS28765	0.26	-2.5
6,398,754	-		PFLU_RS28765	0.26	-2.2
6,398,754	-		PFLU_RS28765	0.26	-2.9
6,398,754	-		PFLU_RS28765	0.26	-0.9
6,398,754	-		PFLU_RS28765	0.26	-0.9
6,398,754	-		PFLU_RS28765	0.26	-2.1
6,398,754	-		PFLU_RS28765	0.26	-1.0
6,398,754	-		PFLU_RS28765	0.26	-1.5
6,398,754	-		PFLU_RS28765	0.26	+0.1
6,398,754	-		PFLU_RS28765	0.26	-1.3
6,398,754	-		PFLU_RS28765	0.26	-3.4
6,398,758	-		PFLU_RS28765	0.26	+2.3
6,398,879	+		PFLU_RS28765	0.37	-1.2
6,398,880	-		PFLU_RS28765	0.37	-0.6
6,398,880	-		PFLU_RS28765	0.37	-1.9
6,399,293	+		PFLU_RS28765	0.73	-0.7
6,399,293	+		PFLU_RS28765	0.73	-2.9
6,399,294	-		PFLU_RS28765	0.73	-2.4
6,399,294	-		PFLU_RS28765	0.73	-0.5
6,399,294	-		PFLU_RS28765	0.73	-2.5
6,399,326	+		PFLU_RS28765	0.76	-4.6
6,399,362	+		PFLU_RS28765	0.79	-2.0
6,399,362	+		PFLU_RS28765	0.79	-1.4
6,399,362	+		PFLU_RS28765	0.79	-2.1
6,399,363	-		PFLU_RS28765	0.79	-1.5
6,399,363	-		PFLU_RS28765	0.79	-1.6