Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28695

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
6,383,986	+		PFLU_RS28690	0.62	-2.1
6,383,986	+		PFLU_RS28690	0.62	-4.0
6,383,987	-		PFLU_RS28690	0.62	-0.4
6,383,987	-		PFLU_RS28690	0.62	-1.9
6,383,987	-		PFLU_RS28690	0.62	-3.1
6,384,131	+		PFLU_RS28690	0.73	-1.9
6,384,131	+		PFLU_RS28690	0.73	-2.7
6,384,132	-		PFLU_RS28690	0.73	-1.2
6,384,234	+		PFLU_RS28690	0.80	-1.1
6,384,234	+		PFLU_RS28690	0.80	-1.3
6,384,234	+		PFLU_RS28690	0.80	-1.1
6,384,234	+		PFLU_RS28690	0.80	-0.7
6,384,234	+		PFLU_RS28690	0.80	-3.6
6,384,234	+		PFLU_RS28690	0.80	-0.6
6,384,234	+		PFLU_RS28690	0.80	-1.9
6,384,234	+		PFLU_RS28690	0.80	-0.4
6,384,234	+		PFLU_RS28690	0.80	-0.8
6,384,234	+		PFLU_RS28690	0.80	-1.1
6,384,235	-		PFLU_RS28690	0.80	-1.9
6,384,235	-		PFLU_RS28690	0.80	-1.7
6,384,235	-		PFLU_RS28690	0.80	-0.3
6,384,235	-		PFLU_RS28690	0.80	-0.6
6,384,235	-		PFLU_RS28690	0.80	-1.9
6,384,235	-		PFLU_RS28690	0.80	+3.3
6,384,235	-		PFLU_RS28690	0.80	-2.7
6,384,235	-		PFLU_RS28690	0.80	-1.2
6,384,235	-		PFLU_RS28690	0.80	-0.3
6,384,235	-		PFLU_RS28690	0.80	+0.6
6,384,235	-		PFLU_RS28690	0.80	+1.1
6,384,235	-		PFLU_RS28690	0.80	+0.4
6,384,235	-		PFLU_RS28690	0.80	+0.7
6,384,236	+		PFLU_RS28690	0.80	-3.2
6,384,236	+		PFLU_RS28690	0.80	+0.0
6,384,236	+		PFLU_RS28690	0.80	-2.8
6,384,236	+		PFLU_RS28690	0.80	-2.1
6,384,236	+		PFLU_RS28690	0.80	-2.3
6,384,236	+		PFLU_RS28690	0.80	-0.9
6,384,236	+		PFLU_RS28690	0.80	-1.7
6,384,237	-		PFLU_RS28690	0.80	-1.6
6,384,237	-		PFLU_RS28690	0.80	+0.1
6,384,237	-		PFLU_RS28690	0.80	-1.6
6,384,237	-		PFLU_RS28690	0.80	-2.2
6,384,237	-		PFLU_RS28690	0.80	-0.4
6,384,237	-		PFLU_RS28690	0.80	-1.7
6,384,237	-		PFLU_RS28690	0.80	-0.9
6,384,237	-		PFLU_RS28690	0.80	-0.1
6,384,237	-		PFLU_RS28690	0.80	-2.8
6,384,484	+				-0.7
6,384,484	+				-0.5
6,384,484	+				-0.4
6,384,484	+				-1.6
6,384,484	+				-2.3
6,384,484	+				-3.6
6,384,485	-				-2.3
6,384,485	-				-0.2
6,384,485	-				+1.6
6,384,485	-				-2.6
6,384,485	-				-1.6
6,384,485	-				-0.7
6,384,589	+		PFLU_RS31185	0.49	-0.9
6,384,590	-		PFLU_RS31185	0.49	-0.2
6,384,590	-		PFLU_RS31185	0.49	-0.9
6,384,594	+		PFLU_RS31185	0.52	+0.6
6,384,594	+		PFLU_RS31185	0.52	-0.4
6,384,595	-		PFLU_RS31185	0.52	-3.4
6,384,595	-		PFLU_RS31185	0.52	-0.9
6,384,595	-		PFLU_RS31185	0.52	-2.5
6,384,595	-		PFLU_RS31185	0.52	-1.8
6,384,595	-		PFLU_RS31185	0.52	-2.0
6,384,595	-		PFLU_RS31185	0.52	-2.7
6,384,595	-		PFLU_RS31185	0.52	-0.6
6,384,595	-		PFLU_RS31185	0.52	-1.6
6,384,599	+		PFLU_RS31185	0.54	+0.8
6,384,711	+				+1.1
6,384,712	-				-1.7
6,384,712	-				-2.7
6,384,738	+				-3.3
6,384,826	+				-2.4
6,384,826	+				-2.9
6,384,826	+				-0.8
6,384,826	+				-2.7
6,384,826	+				-2.8
6,384,826	+				-1.3
6,384,826	+				-2.4
6,384,826	+				-3.5
6,384,826	+				-1.3
6,384,826	+				-1.9
6,384,826	+				-1.7
6,384,826	+				-1.5
6,384,826	+				-1.3
6,384,827	-				-3.4
6,384,827	-				-2.3
6,384,827	-				-3.2
6,384,827	-				-0.6
6,384,827	-				-0.2
6,385,033	+		PFLU_RS28695	0.26	-2.9
6,385,033	+		PFLU_RS28695	0.26	-2.7
6,385,033	+		PFLU_RS28695	0.26	-0.1
6,385,033	+		PFLU_RS28695	0.26	-2.7
6,385,033	+		PFLU_RS28695	0.26	-2.9
6,385,255	+		PFLU_RS28695	0.44	-0.9
6,385,255	+		PFLU_RS28695	0.44	-0.0
6,385,256	-		PFLU_RS28695	0.44	-1.1
6,385,256	-		PFLU_RS28695	0.44	-2.7
6,385,256	-		PFLU_RS28695	0.44	-3.0
6,385,660	+		PFLU_RS28695	0.77	-3.1
6,385,661	-		PFLU_RS28695	0.77	-3.4
6,385,661	-		PFLU_RS28695	0.77	-3.0
6,385,661	-		PFLU_RS28695	0.77	-3.1
6,385,674	+		PFLU_RS28695	0.78	-0.8
6,385,675	-		PFLU_RS28695	0.78	-1.7
6,385,675	-		PFLU_RS28695	0.78	-2.7
6,385,675	-		PFLU_RS28695	0.78	-2.9
6,385,852	+				-3.4
6,385,879	+				-2.2
6,385,930	-				-3.4
6,385,945	+				+0.1
6,385,945	+				+0.4
6,385,945	+				+0.0
6,385,945	+				-2.1
6,385,945	+				+2.3
6,385,945	+				-0.3
6,385,945	+				-0.9
6,385,946	-				-0.6
6,385,946	-				-0.5
6,385,946	-				+0.7
6,385,946	-				-0.8
6,385,946	-				-0.7
6,385,946	-				+1.4
6,385,946	-				-3.0
6,385,946	-				+1.0
6,386,013	+				-1.3
6,386,013	+				+1.0
6,386,013	+				+1.6
6,386,013	+				-0.6
6,386,014	-				+0.4
6,386,014	-				-2.0
6,386,045	+				-0.2
6,386,046	-				+1.0
6,386,144	-		PFLU_RS28700	0.30	-2.5
6,386,339	+		PFLU_RS28700	0.74	+1.7
6,386,339	+		PFLU_RS28700	0.74	-1.7
6,386,339	+		PFLU_RS28700	0.74	+0.6
6,386,339	+		PFLU_RS28700	0.74	-1.9
6,386,339	+		PFLU_RS28700	0.74	+1.3
6,386,340	-		PFLU_RS28700	0.74	-0.4
6,386,340	-		PFLU_RS28700	0.74	+0.2
6,386,488	+				-0.2
6,386,489	-				-2.7
6,386,533	+				+1.2
6,386,533	+				+0.7
6,386,577	+				+0.3
6,386,610	+				+1.0
6,386,610	+				-1.2
6,386,804	-		PFLU_RS28705	0.44	-0.8
6,386,852	+		PFLU_RS28705	0.53	-0.6
6,386,852	+		PFLU_RS28705	0.53	+0.7
6,386,852	+		PFLU_RS28705	0.53	+2.3
6,386,852	+		PFLU_RS28705	0.53	+0.8
6,386,853	-		PFLU_RS28705	0.54	+1.3
6,386,853	-		PFLU_RS28705	0.54	+1.6
6,386,853	-		PFLU_RS28705	0.54	-0.7
6,386,853	-		PFLU_RS28705	0.54	+2.3
6,386,853	-		PFLU_RS28705	0.54	-1.5
6,386,878	+		PFLU_RS28705	0.59	+0.7
6,386,878	+		PFLU_RS28705	0.59	-1.1
6,386,879	-		PFLU_RS28705	0.59	-1.7
6,386,879	-		PFLU_RS28705	0.59	+0.8
6,386,879	-		PFLU_RS28705	0.59	+1.7
6,386,921	+		PFLU_RS28705	0.67	+0.8
6,386,921	+		PFLU_RS28705	0.67	+0.2
6,386,921	+		PFLU_RS28705	0.67	-2.2
6,386,921	+		PFLU_RS28705	0.67	+0.2
6,386,921	+		PFLU_RS28705	0.67	-0.2
6,386,921	+		PFLU_RS28705	0.67	-0.0
6,386,922	-		PFLU_RS28705	0.67	+1.1
6,386,922	-		PFLU_RS28705	0.67	-1.6
6,386,922	-		PFLU_RS28705	0.67	-2.2
6,386,922	-		PFLU_RS28705	0.67	+0.1
6,386,922	-		PFLU_RS28705	0.67	+0.6
6,386,922	-		PFLU_RS28705	0.67	-0.5
6,386,922	-		PFLU_RS28705	0.67	-0.1
6,386,922	-		PFLU_RS28705	0.67	-0.2
6,386,922	-		PFLU_RS28705	0.67	-0.4
6,386,922	-		PFLU_RS28705	0.67	+0.6