Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS28385

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
6,318,661	+				-2.3
6,318,661	+				-1.4
6,318,661	+				-0.2
6,318,661	+				+1.0
6,318,661	+				+0.9
6,318,661	+				-0.2
6,318,661	+				+0.6
6,318,661	+				-1.1
6,318,662	-				+0.7
6,318,662	-				-2.1
6,318,662	-				-0.9
6,318,662	-				+2.7
6,318,662	-				-0.3
6,318,662	-				+1.1
6,318,700	+				-0.7
6,318,700	+				-0.3
6,318,700	+				+1.7
6,318,700	+				-0.1
6,318,701	-				+0.7
6,318,727	+				-1.2
6,318,727	+				-1.4
6,318,728	-				-1.3
6,318,740	+		PFLU_RS28380	0.11	-0.6
6,318,741	-		PFLU_RS28380	0.12	-0.8
6,318,741	-		PFLU_RS28380	0.12	+0.1
6,318,741	-		PFLU_RS28380	0.12	+1.7
6,318,741	-		PFLU_RS28380	0.12	-1.5
6,318,768	-		PFLU_RS28380	0.16	+1.2
6,318,781	+		PFLU_RS28380	0.18	-0.4
6,318,781	+		PFLU_RS28380	0.18	-1.6
6,318,781	+		PFLU_RS28380	0.18	-0.4
6,318,781	+		PFLU_RS28380	0.18	-0.6
6,318,781	+		PFLU_RS28380	0.18	+0.1
6,318,782	-		PFLU_RS28380	0.18	-1.0
6,318,782	-		PFLU_RS28380	0.18	-0.5
6,318,937	+		PFLU_RS28380	0.45	+1.5
6,318,937	+		PFLU_RS28380	0.45	-0.4
6,318,937	+		PFLU_RS28380	0.45	+0.5
6,318,959	+		PFLU_RS28380	0.48	+0.8
6,318,960	-		PFLU_RS28380	0.49	-0.2
6,318,960	-		PFLU_RS28380	0.49	-0.2
6,318,960	-		PFLU_RS28380	0.49	+0.7
6,319,155	+		PFLU_RS28380	0.82	-0.6
6,319,197	+		PFLU_RS28380	0.89	-1.6
6,319,197	+		PFLU_RS28380	0.89	-0.6
6,319,198	-		PFLU_RS28380	0.89	+0.2
6,319,198	-		PFLU_RS28380	0.89	-1.8
6,319,262	-				+0.3
6,319,370	+				-2.0
6,319,370	+				-0.9
6,319,370	+				-1.6
6,319,370	+				-0.4
6,319,370	+				+2.1
6,319,370	+				+1.5
6,319,370	+				+1.5
6,319,371	-				-1.4
6,319,371	-				+1.1
6,319,371	-				+0.6
6,319,371	-				+0.4
6,319,371	-				-1.3
6,319,371	-				-1.6
6,319,381	+				+1.1
6,319,381	+				+0.6
6,319,381	+				+0.1
6,319,501	+				+0.1
6,319,502	-				-2.1
6,319,502	-				-1.1
6,319,502	-				-1.4
6,319,513	+		PFLU_RS28385	0.10	-1.6
6,319,513	+		PFLU_RS28385	0.10	-2.3
6,319,513	+		PFLU_RS28385	0.10	+1.6
6,319,514	-		PFLU_RS28385	0.10	-2.0
6,319,514	-		PFLU_RS28385	0.10	+0.3
6,319,514	-		PFLU_RS28385	0.10	-1.9
6,319,514	-		PFLU_RS28385	0.10	+0.6
6,319,514	-		PFLU_RS28385	0.10	-1.8
6,319,514	-		PFLU_RS28385	0.10	-0.6
6,319,522	+		PFLU_RS28385	0.11	+1.4
6,319,523	-		PFLU_RS28385	0.11	+0.0
6,319,523	-		PFLU_RS28385	0.11	-1.9
6,319,950	+		PFLU_RS28385	0.48	-1.9
6,320,098	+		PFLU_RS28385	0.61	-2.7
6,320,098	+		PFLU_RS28385	0.61	-2.2
6,320,098	+		PFLU_RS28385	0.61	-2.9
6,320,098	+		PFLU_RS28385	0.61	-3.0
6,320,098	+		PFLU_RS28385	0.61	-2.2
6,320,098	+		PFLU_RS28385	0.61	-3.0
6,320,098	+		PFLU_RS28385	0.61	-3.1
6,320,098	+		PFLU_RS28385	0.61	+1.0
6,320,098	+		PFLU_RS28385	0.61	-0.3
6,320,098	+		PFLU_RS28385	0.61	-2.0
6,320,098	+		PFLU_RS28385	0.61	-0.3
6,320,099	-		PFLU_RS28385	0.61	+0.8
6,320,099	-		PFLU_RS28385	0.61	-1.5
6,320,099	-		PFLU_RS28385	0.61	-0.3
6,320,099	-		PFLU_RS28385	0.61	-1.5
6,320,099	-		PFLU_RS28385	0.61	-2.0
6,320,099	-		PFLU_RS28385	0.61	-1.1
6,320,099	-		PFLU_RS28385	0.61	-0.6
6,320,099	-		PFLU_RS28385	0.61	-0.8
6,320,161	+		PFLU_RS28385	0.67	-2.8
6,320,161	+		PFLU_RS28385	0.67	-2.9
6,320,161	+		PFLU_RS28385	0.67	-1.7
6,320,161	+		PFLU_RS28385	0.67	-1.2
6,320,161	+		PFLU_RS28385	0.67	-3.5
6,320,161	+		PFLU_RS28385	0.67	+0.2
6,320,161	+		PFLU_RS28385	0.67	-2.5
6,320,161	+		PFLU_RS28385	0.67	-1.7
6,320,162	-		PFLU_RS28385	0.67	-1.7
6,320,162	-		PFLU_RS28385	0.67	-1.6
6,320,162	-		PFLU_RS28385	0.67	-0.6
6,320,162	-		PFLU_RS28385	0.67	-1.3
6,320,162	-		PFLU_RS28385	0.67	+0.2
6,320,162	-		PFLU_RS28385	0.67	+0.1
6,320,162	-		PFLU_RS28385	0.67	-3.0
6,320,162	-		PFLU_RS28385	0.67	-0.8
6,320,189	+		PFLU_RS28385	0.69	-1.3
6,320,189	+		PFLU_RS28385	0.69	-2.9
6,320,190	-		PFLU_RS28385	0.69	-2.1
6,320,190	-		PFLU_RS28385	0.69	-0.9
6,320,197	+		PFLU_RS28385	0.70	-2.8
6,320,198	-		PFLU_RS28385	0.70	-0.8
6,320,248	+		PFLU_RS28385	0.74	-2.5
6,320,248	+		PFLU_RS28385	0.74	-3.2
6,320,248	+		PFLU_RS28385	0.74	-3.6
6,320,248	+		PFLU_RS28385	0.74	-3.5
6,320,248	+		PFLU_RS28385	0.74	-2.7
6,320,249	-		PFLU_RS28385	0.75	-2.6
6,320,249	-		PFLU_RS28385	0.75	-0.2
6,320,249	-		PFLU_RS28385	0.75	-2.8
6,320,249	-		PFLU_RS28385	0.75	+0.6
6,320,249	-		PFLU_RS28385	0.75	-0.2
6,320,249	-		PFLU_RS28385	0.75	-1.4
6,320,249	-		PFLU_RS28385	0.75	+0.7
6,320,249	-		PFLU_RS28385	0.75	+1.4
6,320,249	-		PFLU_RS28385	0.75	-0.0
6,320,249	-		PFLU_RS28385	0.75	-0.4
6,320,249	-		PFLU_RS28385	0.75	-0.9
6,320,249	-		PFLU_RS28385	0.75	+0.2
6,320,275	+		PFLU_RS28385	0.77	-1.1
6,320,275	+		PFLU_RS28385	0.77	-3.1
6,320,275	+		PFLU_RS28385	0.77	-2.6
6,320,276	-		PFLU_RS28385	0.77	-1.2
6,320,437	+				-2.1
6,320,437	+				-1.8
6,320,438	-				-3.1
6,320,438	-				-1.2
6,320,438	-				-1.1
6,320,494	+				-3.5
6,320,494	+				-3.2
6,320,494	+				-3.1
6,320,495	-				-0.7
6,320,495	-				-0.4
6,320,495	-				-0.5
6,320,515	+				-2.5
6,320,515	+				-2.9
6,320,515	+				-1.5
6,320,515	+				-1.2
6,320,515	+				-2.6
6,320,515	+				-3.6
6,320,515	+				-1.7
6,320,516	-				-1.3
6,320,516	-				+0.8
6,320,516	-				+0.5
6,320,516	-				+0.8
6,320,516	-				-0.4
6,320,516	-				-0.7
6,320,516	-				+0.9
6,320,516	-				-2.5
6,320,516	-				-2.1
6,320,516	-				-2.1
6,320,516	-				-1.3
6,320,528	+				-1.3
6,320,727	+		PFLU_RS28390	0.29	-1.5
6,320,727	+		PFLU_RS28390	0.29	-3.6
6,320,727	+		PFLU_RS28390	0.29	-3.1
6,320,850	+		PFLU_RS28390	0.49	-2.1
6,320,850	+		PFLU_RS28390	0.49	-2.7
6,320,851	-		PFLU_RS28390	0.49	-1.7
6,320,906	+		PFLU_RS28390	0.58	-3.0
6,320,906	+		PFLU_RS28390	0.58	-1.6
6,320,907	-		PFLU_RS28390	0.58	-0.2
6,320,907	-		PFLU_RS28390	0.58	+1.4
6,320,907	-		PFLU_RS28390	0.58	-0.4
6,320,907	-		PFLU_RS28390	0.58	-0.2
6,320,907	-		PFLU_RS28390	0.58	-2.5
6,320,951	+		PFLU_RS28390	0.65	-1.3
6,320,951	+		PFLU_RS28390	0.65	-1.5
6,320,952	-		PFLU_RS28390	0.65	-1.7
6,320,952	-		PFLU_RS28390	0.65	-1.2
6,320,952	-		PFLU_RS28390	0.65	+0.6
6,320,960	+		PFLU_RS28390	0.67	-3.3
6,320,960	+		PFLU_RS28390	0.67	-3.7
6,320,960	+		PFLU_RS28390	0.67	-2.8
6,320,960	+		PFLU_RS28390	0.67	-3.7
6,320,960	+		PFLU_RS28390	0.67	-1.0
6,320,961	-		PFLU_RS28390	0.67	-2.7
6,320,961	-		PFLU_RS28390	0.67	-2.4
6,320,961	-		PFLU_RS28390	0.67	-1.5
6,320,961	-		PFLU_RS28390	0.67	-0.8
6,320,961	-		PFLU_RS28390	0.67	-1.8
6,320,961	-		PFLU_RS28390	0.67	-0.9
6,320,961	-		PFLU_RS28390	0.67	-2.9
6,321,082	+		PFLU_RS28390	0.86	-3.9
6,321,083	-		PFLU_RS28390	0.86	-2.1
6,321,087	+		PFLU_RS28390	0.87	-2.3
6,321,087	+		PFLU_RS28390	0.87	-4.1
6,321,088	-		PFLU_RS28390	0.87	-0.0
6,321,088	-		PFLU_RS28390	0.87	-3.0
6,321,088	-		PFLU_RS28390	0.87	-2.5
6,321,088	-		PFLU_RS28390	0.87	-1.1
6,321,088	-		PFLU_RS28390	0.87	+0.1
6,321,088	-		PFLU_RS28390	0.87	-0.9
6,321,088	-		PFLU_RS28390	0.87	-0.5
6,321,088	-		PFLU_RS28390	0.87	-2.8
6,321,115	+				-1.6
6,321,116	-				-3.5
6,321,119	+				-1.2
6,321,119	+				-1.7
6,321,119	+				-0.9
6,321,119	+				-2.3
6,321,164	+				-4.2
6,321,164	+				-1.7
6,321,165	-				+1.1
6,321,210	+				+2.4
6,321,299	+		PFLU_RS28395	0.26	+2.3
6,321,299	+		PFLU_RS28395	0.26	+3.4
6,321,299	+		PFLU_RS28395	0.26	+1.6
6,321,300	-		PFLU_RS28395	0.26	+2.6
6,321,300	-		PFLU_RS28395	0.26	+2.3
6,321,300	-		PFLU_RS28395	0.26	+1.8
6,321,300	-		PFLU_RS28395	0.26	-1.4
6,321,300	-		PFLU_RS28395	0.26	+1.8
6,321,300	-		PFLU_RS28395	0.26	+0.2
6,321,300	-		PFLU_RS28395	0.26	+2.9
6,321,506	+		PFLU_RS28395	0.73	+2.7
6,321,506	+		PFLU_RS28395	0.73	+1.7
6,321,507	-		PFLU_RS28395	0.73	-1.1
6,321,507	-		PFLU_RS28395	0.73	-0.2
6,321,507	-		PFLU_RS28395	0.73	+2.4
6,321,518	+		PFLU_RS28395	0.76	+1.7
6,321,518	+		PFLU_RS28395	0.76	+2.7