Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS27620

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
6,146,318	-		PFLU_RS27615	0.45	-3.3
6,146,467	+		PFLU_RS27615	0.56	+2.0
6,146,516	-		PFLU_RS27615	0.60	+2.2
6,146,701	+		PFLU_RS27615	0.74	-1.5
6,146,701	+		PFLU_RS27615	0.74	+0.1
6,146,701	+		PFLU_RS27615	0.74	+2.1
6,146,701	+		PFLU_RS27615	0.74	+0.6
6,146,702	-		PFLU_RS27615	0.74	+1.2
6,146,702	-		PFLU_RS27615	0.74	+2.1
6,146,702	-		PFLU_RS27615	0.74	+0.3
6,146,785	+		PFLU_RS27615	0.81	-3.8
6,146,785	+		PFLU_RS27615	0.81	-1.9
6,146,786	-		PFLU_RS27615	0.81	-0.9
6,146,786	-		PFLU_RS27615	0.81	-1.7
6,146,786	-		PFLU_RS27615	0.81	-2.6
6,146,815	+		PFLU_RS27615	0.83	+0.6
6,146,816	-		PFLU_RS27615	0.83	-0.4
6,146,824	+		PFLU_RS27615	0.84	-1.2
6,146,824	+		PFLU_RS27615	0.84	-1.5
6,146,824	+		PFLU_RS27615	0.84	-1.3
6,146,824	+		PFLU_RS27615	0.84	-2.9
6,146,824	+		PFLU_RS27615	0.84	-1.0
6,146,824	+		PFLU_RS27615	0.84	-2.8
6,146,824	+		PFLU_RS27615	0.84	+0.4
6,146,824	+		PFLU_RS27615	0.84	+1.3
6,146,824	+		PFLU_RS27615	0.84	+0.9
6,146,824	+		PFLU_RS27615	0.84	+1.5
6,146,824	+		PFLU_RS27615	0.84	+1.7
6,146,824	+		PFLU_RS27615	0.84	+0.2
6,146,824	+		PFLU_RS27615	0.84	+3.2
6,146,824	+		PFLU_RS27615	0.84	+1.4
6,146,824	+		PFLU_RS27615	0.84	-1.9
6,146,824	+		PFLU_RS27615	0.84	+0.1
6,146,825	-		PFLU_RS27615	0.84	-1.1
6,146,825	-		PFLU_RS27615	0.84	+0.8
6,146,825	-		PFLU_RS27615	0.84	-2.6
6,146,825	-		PFLU_RS27615	0.84	-2.0
6,146,825	-		PFLU_RS27615	0.84	-0.3
6,146,825	-		PFLU_RS27615	0.84	+1.8
6,146,825	-		PFLU_RS27615	0.84	+0.1
6,146,825	-		PFLU_RS27615	0.84	+1.9
6,146,825	-		PFLU_RS27615	0.84	-0.3
6,146,825	-		PFLU_RS27615	0.84	-0.3
6,146,825	-		PFLU_RS27615	0.84	-3.3
6,146,864	-		PFLU_RS27615	0.87	+0.4
6,146,864	-		PFLU_RS27615	0.87	+2.9
6,146,876	-		PFLU_RS27615	0.88	-0.4
6,146,876	-		PFLU_RS27615	0.88	-2.8
6,146,953	+				-1.9
6,146,953	+				-1.4
6,146,954	-				-2.4
6,146,954	-				-1.6
6,146,954	-				-0.5
6,146,954	-				-0.1
6,146,954	-				-1.8
6,146,954	-				-1.5
6,146,954	-				-0.8
6,146,994	+				-0.3
6,146,994	+				-0.2
6,146,995	-				-1.4
6,146,995	-				+0.3
6,146,995	-				-0.1
6,147,036	+				-0.7
6,147,036	+				+0.3
6,147,037	-				-2.1
6,147,037	-				-2.1
6,147,088	+				-1.2
6,147,088	+				-0.1
6,147,088	+				-0.8
6,147,088	+				+2.2
6,147,088	+				+1.0
6,147,088	+				+2.0
6,147,088	+				+0.1
6,147,088	+				-0.1
6,147,088	+				-1.1
6,147,088	+				+0.8
6,147,089	-				-2.6
6,147,089	-				+1.1
6,147,089	-				+0.0
6,147,089	-				+1.7
6,147,089	-				-0.5
6,147,089	-				+0.9
6,147,089	-				-2.1
6,147,111	-				+0.7
6,147,111	-				+0.9
6,147,162	-				-2.9
6,147,219	-				+0.7
6,147,241	+				+0.2
6,147,241	+				-0.3
6,147,241	+				-1.2
6,147,241	+				+0.2
6,147,241	+				-1.1
6,147,241	+				-0.6
6,147,241	+				-3.3
6,147,241	+				+0.2
6,147,242	-				-0.4
6,147,244	+				-3.1
6,147,244	+				-0.2
6,147,244	+				-3.1
6,147,244	+				-3.2
6,147,245	-				-2.5
6,147,245	-				-2.0
6,147,245	-				-1.4
6,147,323	+				-2.6
6,147,346	+				-0.5
6,147,346	+				-2.3
6,147,346	+				-2.4
6,147,346	+				-1.8
6,147,347	-				-2.8
6,147,347	-				-2.6
6,147,347	-				-1.5
6,147,376	+				-1.0
6,147,376	+				-3.7
6,147,376	+				-2.0
6,147,376	+				-3.8
6,147,376	+				-3.2
6,147,376	+				-2.4
6,147,376	+				-3.8
6,147,376	+				-2.2
6,147,376	+				-3.4
6,147,376	+				-2.7
6,147,377	-				-3.5
6,147,445	+		PFLU_RS27620	0.11	-3.4
6,147,445	+		PFLU_RS27620	0.11	-3.3
6,147,445	+		PFLU_RS27620	0.11	-2.3
6,147,446	-		PFLU_RS27620	0.11	-3.6
6,147,446	-		PFLU_RS27620	0.11	-3.1
6,147,446	-		PFLU_RS27620	0.11	-3.2
6,147,446	-		PFLU_RS27620	0.11	-3.1
6,147,446	-		PFLU_RS27620	0.11	-1.1
6,147,469	+		PFLU_RS27620	0.13	-2.6
6,147,469	+		PFLU_RS27620	0.13	-2.8
6,147,470	-		PFLU_RS27620	0.13	+1.5
6,147,470	-		PFLU_RS27620	0.13	-4.1
6,147,470	-		PFLU_RS27620	0.13	-1.5
6,147,470	-		PFLU_RS27620	0.13	-3.9
6,147,470	-		PFLU_RS27620	0.13	-2.5
6,147,470	-		PFLU_RS27620	0.13	-2.5
6,147,478	+		PFLU_RS27620	0.13	-4.1
6,147,478	+		PFLU_RS27620	0.13	-3.1
6,147,478	+		PFLU_RS27620	0.13	-2.7
6,147,478	+		PFLU_RS27620	0.13	-3.3
6,147,478	+		PFLU_RS27620	0.13	-1.1
6,147,479	-		PFLU_RS27620	0.13	-1.9
6,147,479	-		PFLU_RS27620	0.13	-2.5
6,147,479	-		PFLU_RS27620	0.13	-3.7
6,147,582	-		PFLU_RS27620	0.19	-3.1
6,147,582	-		PFLU_RS27620	0.19	-3.1
6,147,605	+		PFLU_RS27620	0.20	-3.6
6,147,606	-		PFLU_RS27620	0.20	-3.3
6,147,606	-		PFLU_RS27620	0.20	-3.4
6,147,683	+		PFLU_RS27620	0.25	-3.2
6,147,727	+		PFLU_RS27620	0.27	-1.1
6,147,728	-		PFLU_RS27620	0.27	-3.6
6,147,728	-		PFLU_RS27620	0.27	-3.8
6,147,728	-		PFLU_RS27620	0.27	-3.1
6,147,728	-		PFLU_RS27620	0.27	-3.0
6,147,799	+		PFLU_RS27620	0.31	-2.6
6,147,845	+		PFLU_RS27620	0.33	-2.8
6,147,846	-		PFLU_RS27620	0.34	-3.7
6,147,846	-		PFLU_RS27620	0.34	-1.7
6,147,919	+		PFLU_RS27620	0.38	-2.5
6,147,919	+		PFLU_RS27620	0.38	-3.2
6,147,920	-		PFLU_RS27620	0.38	-2.4
6,147,952	+		PFLU_RS27620	0.39	-3.5
6,147,952	+		PFLU_RS27620	0.39	-3.2
6,147,952	+		PFLU_RS27620	0.39	-4.8
6,147,952	+		PFLU_RS27620	0.39	-4.1
6,147,952	+		PFLU_RS27620	0.39	-4.5
6,147,952	+		PFLU_RS27620	0.39	-1.4
6,147,952	+		PFLU_RS27620	0.39	-3.1
6,147,953	-		PFLU_RS27620	0.39	-2.9
6,147,953	-		PFLU_RS27620	0.39	-2.1
6,147,953	-		PFLU_RS27620	0.39	-1.6
6,147,953	-		PFLU_RS27620	0.39	-4.3
6,147,953	-		PFLU_RS27620	0.39	-4.2
6,147,953	-		PFLU_RS27620	0.39	-2.8
6,147,953	-		PFLU_RS27620	0.39	-3.6
6,147,953	-		PFLU_RS27620	0.39	-2.7
6,147,953	-		PFLU_RS27620	0.39	-2.7
6,147,953	-		PFLU_RS27620	0.39	-2.9
6,148,097	-		PFLU_RS27620	0.47	-2.8
6,148,172	+		PFLU_RS27620	0.52	-2.6
6,148,173	-		PFLU_RS27620	0.52	-2.1
6,148,173	-		PFLU_RS27620	0.52	-4.2
6,148,407	+		PFLU_RS27620	0.65	-4.5
6,148,407	+		PFLU_RS27620	0.65	-4.6
6,148,407	+		PFLU_RS27620	0.65	-3.5
6,148,408	-		PFLU_RS27620	0.65	-4.4
6,148,408	-		PFLU_RS27620	0.65	-2.3
6,148,408	-		PFLU_RS27620	0.65	-2.8
6,148,480	+		PFLU_RS27620	0.69	-0.3
6,148,480	+		PFLU_RS27620	0.69	-3.3
6,148,508	+		PFLU_RS27620	0.70	-3.0
6,148,508	+		PFLU_RS27620	0.70	-3.3
6,148,508	+		PFLU_RS27620	0.70	-5.0
6,148,508	+		PFLU_RS27620	0.70	-1.1
6,148,508	+		PFLU_RS27620	0.70	-3.6
6,148,597	+		PFLU_RS27620	0.75	-0.2
6,148,597	+		PFLU_RS27620	0.75	-2.4
6,148,598	-		PFLU_RS27620	0.75	-4.0
6,148,666	+		PFLU_RS27620	0.79	-3.0
6,148,666	+		PFLU_RS27620	0.79	-1.7
6,148,666	+		PFLU_RS27620	0.79	-0.7
6,148,666	+		PFLU_RS27620	0.79	+0.2
6,148,666	+		PFLU_RS27620	0.79	-4.1
6,148,666	+		PFLU_RS27620	0.79	-3.4
6,148,666	+		PFLU_RS27620	0.79	-3.2
6,148,666	+		PFLU_RS27620	0.79	+0.1
6,148,666	+		PFLU_RS27620	0.79	-3.7
6,148,666	+		PFLU_RS27620	0.79	-2.2
6,148,667	-		PFLU_RS27620	0.79	-3.5
6,148,667	-		PFLU_RS27620	0.79	-1.9
6,148,667	-		PFLU_RS27620	0.79	-2.2
6,148,667	-		PFLU_RS27620	0.79	-2.5
6,148,798	+		PFLU_RS27620	0.86	-3.2
6,148,798	+		PFLU_RS27620	0.86	-2.1
6,148,799	-		PFLU_RS27620	0.86	-3.1
6,148,799	-		PFLU_RS27620	0.86	-4.4
6,148,799	-		PFLU_RS27620	0.86	-4.0
6,148,799	-		PFLU_RS27620	0.86	-3.3
6,148,799	-		PFLU_RS27620	0.86	-3.3
6,148,799	-		PFLU_RS27620	0.86	-3.4
6,148,799	-		PFLU_RS27620	0.86	-2.1
6,148,808	+		PFLU_RS27620	0.87	-2.5
6,148,809	-		PFLU_RS27620	0.87	-1.9
6,148,826	+		PFLU_RS27620	0.88	-4.3
6,148,847	+		PFLU_RS27620	0.89	-1.9
6,148,848	-		PFLU_RS27620	0.89	-3.4
6,148,848	-		PFLU_RS27620	0.89	-2.9
6,148,848	-		PFLU_RS27620	0.89	-4.3
6,148,848	-		PFLU_RS27620	0.89	-3.8
6,148,972	+				-2.7
6,148,973	-				-3.2
6,148,973	-				-3.5
6,148,973	-				-3.1
6,148,973	-				-3.9
6,148,984	+				-2.8
6,148,984	+				-3.6
6,149,035	+				-3.5
6,149,035	+				-3.6
6,149,035	+				+1.0
6,149,035	+				-3.3
6,149,036	-				-3.8
6,149,036	-				-2.2
6,149,036	-				-4.5
6,149,036	-				+0.3
6,149,036	-				-3.1
6,149,045	+				-2.3
6,149,046	-				-1.8
6,149,046	-				-3.2
6,149,046	-				-3.4
6,149,067	+				-0.5
6,149,067	+				-3.0
6,149,067	+				-2.6
6,149,067	+				+0.7
6,149,067	+				-3.3
6,149,067	+				-4.2
6,149,067	+				-2.3
6,149,067	+				-1.1
6,149,067	+				-2.4
6,149,067	+				-2.0
6,149,067	+				-0.3
6,149,068	-				+1.5
6,149,068	-				+0.3
6,149,068	-				-1.1
6,149,068	-				-2.1
6,149,068	-				-0.3
6,149,068	-				+0.0
6,149,068	-				+2.5
6,149,127	+				-3.0
6,149,127	+				-0.2
6,149,127	+				-1.9
6,149,127	+				+0.2
6,149,127	+				-0.6
6,149,128	-				+0.7
6,149,128	-				-2.8
6,149,128	-				+0.3
6,149,134	-				-0.1
6,149,239	+				-0.5
6,149,239	+				+1.2
6,149,240	-				+1.7
6,149,240	-				+0.3
6,149,240	-				+0.5
6,149,240	-				+0.7
6,149,240	-				+0.8
6,149,253	+				-1.2
6,149,253	+				-0.6
6,149,254	-				+0.5
6,149,254	-				+0.6
6,149,254	-				-0.1
6,149,254	-				+2.4
6,149,265	-				+2.0
6,149,311	+				+1.7
6,149,311	+				+1.3
6,149,311	+				-1.8
6,149,311	+				-0.2
6,149,312	-				+2.2
6,149,312	-				+0.3
6,149,312	-				-0.3
6,149,312	-				+1.4
6,149,336	-				-0.3
6,149,385	+				+1.7
6,149,385	+				+0.5
6,149,385	+				+0.9
6,149,385	+				-0.7
6,149,385	+				+0.4
6,149,385	+				-2.3
6,149,385	+				+0.5
6,149,386	-				-2.1
6,149,386	-				+1.5
6,149,386	-				-0.7
6,149,386	-				+0.8
6,149,386	-				+0.4
6,149,386	-				-0.8
6,149,386	-				-1.4
6,149,386	-				-1.5
6,149,554	+		PFLU_RS27625	0.62	+1.6
6,149,631	+				-0.5
6,149,676	+				-2.8
6,149,677	-				-0.4
6,149,791	+				+1.5
6,149,791	+				+0.6
6,149,792	-				-2.0
6,149,792	-				-1.4
6,149,792	-				-1.3
6,149,792	-				+1.4
6,149,792	-				-2.5
6,149,792	-				+0.1
6,149,792	-				-2.1