Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS27475

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
6,110,135	+		PFLU_RS27465	0.40	-0.3
6,110,135	+		PFLU_RS27465	0.40	-0.3
6,110,135	+		PFLU_RS27465	0.40	+1.7
6,110,135	+		PFLU_RS27465	0.40	+1.3
6,110,136	-		PFLU_RS27465	0.40	-0.3
6,110,136	-		PFLU_RS27465	0.40	-2.4
6,110,136	-		PFLU_RS27465	0.40	-0.5
6,110,139	+		PFLU_RS27465	0.40	-1.2
6,110,139	+		PFLU_RS27465	0.40	-1.3
6,110,140	-		PFLU_RS27465	0.40	-1.5
6,110,140	-		PFLU_RS27465	0.40	+0.7
6,110,149	+		PFLU_RS27465	0.41	-0.5
6,110,150	-		PFLU_RS27465	0.41	+0.7
6,110,150	-		PFLU_RS27465	0.41	-0.9
6,110,150	-		PFLU_RS27465	0.41	+2.3
6,110,300	-		PFLU_RS27465	0.60	+0.3
6,110,632	+				-1.6
6,110,633	-				+0.3
6,110,633	-				+1.8
6,110,633	-				-1.1
6,110,633	-				+1.0
6,110,662	+				-1.2
6,110,663	-				-3.1
6,110,682	-				+0.2
6,110,682	-				+1.3
6,110,682	-				+1.7
6,110,719	+				-0.8
6,110,719	+				+0.2
6,110,719	+				+0.6
6,110,825	+		PFLU_RS27470	0.24	-1.5
6,110,825	+		PFLU_RS27470	0.24	+0.2
6,110,825	+		PFLU_RS27470	0.24	+0.7
6,110,825	+		PFLU_RS27470	0.24	+0.1
6,110,826	-		PFLU_RS27470	0.25	-2.1
6,110,826	-		PFLU_RS27470	0.25	-2.3
6,110,826	-		PFLU_RS27470	0.25	-0.9
6,110,911	-		PFLU_RS27470	0.47	+0.6
6,110,937	+		PFLU_RS27470	0.54	-1.6
6,110,962	-		PFLU_RS27470	0.60	+0.1
6,110,962	-		PFLU_RS27470	0.60	-0.1
6,110,962	-		PFLU_RS27470	0.60	+0.1
6,110,962	-		PFLU_RS27470	0.60	+1.0
6,110,978	+		PFLU_RS27470	0.65	+1.3
6,110,978	+		PFLU_RS27470	0.65	+0.3
6,110,978	+		PFLU_RS27470	0.65	+0.7
6,110,978	+		PFLU_RS27470	0.65	+1.3
6,110,978	+		PFLU_RS27470	0.65	-0.4
6,110,978	+		PFLU_RS27470	0.65	+1.6
6,110,978	+		PFLU_RS27470	0.65	+0.8
6,110,978	+		PFLU_RS27470	0.65	-2.9
6,110,979	-		PFLU_RS27470	0.65	+0.5
6,110,979	-		PFLU_RS27470	0.65	-2.1
6,110,979	-		PFLU_RS27470	0.65	-0.1
6,110,979	-		PFLU_RS27470	0.65	+0.3
6,110,979	-		PFLU_RS27470	0.65	+0.1
6,110,979	-		PFLU_RS27470	0.65	-0.3
6,111,029	+		PFLU_RS27470	0.78	-0.7
6,111,029	+		PFLU_RS27470	0.78	-2.3
6,111,121	+				-1.7
6,111,121	+				+0.4
6,111,121	+				-2.2
6,111,121	+				-1.1
6,111,121	+				-0.7
6,111,122	-				-0.5
6,111,122	-				+0.7
6,111,122	-				-0.9
6,111,262	+		PFLU_RS27475	0.18	+0.3
6,111,262	+		PFLU_RS27475	0.18	+0.7
6,111,263	-		PFLU_RS27475	0.18	-0.1
6,111,263	-		PFLU_RS27475	0.18	-0.5
6,111,263	-		PFLU_RS27475	0.18	-0.9
6,111,266	+		PFLU_RS27475	0.18	+0.7
6,111,266	+		PFLU_RS27475	0.18	-0.1
6,111,266	+		PFLU_RS27475	0.18	-0.5
6,111,266	+		PFLU_RS27475	0.18	-0.3
6,111,266	+		PFLU_RS27475	0.18	+0.7
6,111,266	+		PFLU_RS27475	0.18	-0.7
6,111,266	+		PFLU_RS27475	0.18	-0.1
6,111,266	+		PFLU_RS27475	0.18	-0.9
6,111,266	+		PFLU_RS27475	0.18	-0.5
6,111,266	+		PFLU_RS27475	0.18	-0.9
6,111,266	+		PFLU_RS27475	0.18	-1.2
6,111,266	+		PFLU_RS27475	0.18	-0.3
6,111,266	+		PFLU_RS27475	0.18	-0.3
6,111,266	+		PFLU_RS27475	0.18	-1.1
6,111,266	+		PFLU_RS27475	0.18	-1.3
6,111,266	+		PFLU_RS27475	0.18	-0.5
6,111,266	+		PFLU_RS27475	0.18	-0.3
6,111,266	+		PFLU_RS27475	0.18	+2.3
6,111,266	+		PFLU_RS27475	0.18	+1.3
6,111,266	+		PFLU_RS27475	0.18	+0.3
6,111,266	+		PFLU_RS27475	0.18	+2.3
6,111,266	+		PFLU_RS27475	0.18	-0.9
6,111,266	+		PFLU_RS27475	0.18	+0.7
6,111,266	+		PFLU_RS27475	0.18	+1.3
6,111,266	+		PFLU_RS27475	0.18	+0.7
6,111,266	+		PFLU_RS27475	0.18	-0.9
6,111,266	+		PFLU_RS27475	0.18	-1.3
6,111,266	+		PFLU_RS27475	0.18	-1.1
6,111,266	+		PFLU_RS27475	0.18	+2.9
6,111,266	+		PFLU_RS27475	0.18	+0.3
6,111,266	+		PFLU_RS27475	0.18	-0.1
6,111,266	+		PFLU_RS27475	0.18	-0.5
6,111,266	+		PFLU_RS27475	0.18	+0.3
6,111,266	+		PFLU_RS27475	0.18	-1.3
6,111,266	+		PFLU_RS27475	0.18	-0.3
6,111,266	+		PFLU_RS27475	0.18	+0.2
6,111,266	+		PFLU_RS27475	0.18	+2.7
6,111,266	+		PFLU_RS27475	0.18	-0.9
6,111,266	+		PFLU_RS27475	0.18	-1.1
6,111,266	+		PFLU_RS27475	0.18	-1.4
6,111,266	+		PFLU_RS27475	0.18	+0.7
6,111,266	+		PFLU_RS27475	0.18	+1.3
6,111,266	+		PFLU_RS27475	0.18	-0.5
6,111,267	+		PFLU_RS27475	0.18	-0.7
6,111,267	-		PFLU_RS27475	0.18	-0.7
6,111,267	-		PFLU_RS27475	0.18	-0.1
6,111,267	-		PFLU_RS27475	0.18	-0.3
6,111,267	-		PFLU_RS27475	0.18	+2.3
6,111,267	-		PFLU_RS27475	0.18	+0.7
6,111,267	-		PFLU_RS27475	0.18	-0.1
6,111,267	-		PFLU_RS27475	0.18	-0.5
6,111,267	-		PFLU_RS27475	0.18	-0.5
6,111,267	-		PFLU_RS27475	0.18	-0.5
6,111,267	-		PFLU_RS27475	0.18	-0.5
6,111,267	-		PFLU_RS27475	0.18	-0.3
6,111,267	-		PFLU_RS27475	0.18	-1.4
6,111,267	-		PFLU_RS27475	0.18	-0.5
6,111,267	-		PFLU_RS27475	0.18	+0.3
6,111,267	-		PFLU_RS27475	0.18	-1.4
6,111,267	-		PFLU_RS27475	0.18	-0.1
6,111,267	-		PFLU_RS27475	0.18	+0.7
6,111,267	-		PFLU_RS27475	0.18	-0.9
6,111,267	-		PFLU_RS27475	0.18	-0.5
6,111,267	-		PFLU_RS27475	0.18	+3.3
6,111,267	-		PFLU_RS27475	0.18	-1.2
6,111,267	-		PFLU_RS27475	0.18	-1.5
6,111,267	-		PFLU_RS27475	0.18	+0.3
6,111,267	-		PFLU_RS27475	0.18	+0.7
6,111,267	-		PFLU_RS27475	0.18	+0.3
6,111,267	-		PFLU_RS27475	0.18	-0.3
6,111,267	-		PFLU_RS27475	0.18	+1.3
6,111,267	-		PFLU_RS27475	0.18	-1.3
6,111,267	-		PFLU_RS27475	0.18	-0.1
6,111,267	-		PFLU_RS27475	0.18	+1.3
6,111,267	-		PFLU_RS27475	0.18	+0.5
6,111,267	-		PFLU_RS27475	0.18	+0.3
6,111,267	-		PFLU_RS27475	0.18	-0.7
6,111,267	-		PFLU_RS27475	0.18	+0.3
6,111,267	-		PFLU_RS27475	0.18	+2.3
6,111,267	-		PFLU_RS27475	0.18	-0.3
6,111,267	-		PFLU_RS27475	0.18	+0.5
6,111,268	+		PFLU_RS27475	0.18	+0.7
6,111,268	+		PFLU_RS27475	0.18	-1.1
6,111,268	+		PFLU_RS27475	0.18	-0.3
6,111,268	+		PFLU_RS27475	0.18	-0.9
6,111,268	+		PFLU_RS27475	0.18	+0.3
6,111,268	+		PFLU_RS27475	0.18	-0.3
6,111,268	+		PFLU_RS27475	0.18	+0.7
6,111,268	+		PFLU_RS27475	0.18	-0.3
6,111,268	+		PFLU_RS27475	0.18	+2.3
6,111,268	+		PFLU_RS27475	0.18	-0.1
6,111,268	+		PFLU_RS27475	0.18	+0.3
6,111,268	+		PFLU_RS27475	0.18	-0.7
6,111,268	+		PFLU_RS27475	0.18	+2.3
6,111,268	+		PFLU_RS27475	0.18	+0.7
6,111,269	-		PFLU_RS27475	0.18	+0.7
6,111,269	-		PFLU_RS27475	0.18	+0.3
6,111,269	-		PFLU_RS27475	0.18	-1.7
6,111,269	-		PFLU_RS27475	0.18	-0.1
6,111,269	-		PFLU_RS27475	0.18	-0.9
6,111,269	-		PFLU_RS27475	0.18	-1.3
6,111,269	-		PFLU_RS27475	0.18	+1.3
6,111,269	-		PFLU_RS27475	0.18	+0.3
6,111,269	-		PFLU_RS27475	0.18	-0.3
6,111,270	+		PFLU_RS27475	0.19	-0.7
6,111,270	+		PFLU_RS27475	0.19	-0.9
6,111,270	+		PFLU_RS27475	0.19	-1.4
6,111,270	+		PFLU_RS27475	0.19	+0.5
6,111,270	+		PFLU_RS27475	0.19	-0.5
6,111,270	+		PFLU_RS27475	0.19	-0.9
6,111,270	+		PFLU_RS27475	0.19	-1.4
6,111,270	+		PFLU_RS27475	0.19	+0.3
6,111,270	+		PFLU_RS27475	0.19	-0.3
6,111,270	+		PFLU_RS27475	0.19	-0.1
6,111,270	+		PFLU_RS27475	0.19	-0.1
6,111,271	-		PFLU_RS27475	0.19	-0.3
6,111,439	+		PFLU_RS27475	0.38	-0.3
6,111,440	-		PFLU_RS27475	0.38	-2.0
6,111,556	+		PFLU_RS27475	0.52	-0.3
6,111,556	+		PFLU_RS27475	0.52	-0.3
6,111,556	+		PFLU_RS27475	0.52	+0.3
6,111,557	-		PFLU_RS27475	0.52	-0.1
6,111,557	-		PFLU_RS27475	0.52	+0.7
6,111,566	-		PFLU_RS27475	0.53	+1.3
6,111,566	-		PFLU_RS27475	0.53	-0.5
6,111,580	+		PFLU_RS27475	0.55	-1.1
6,111,580	+		PFLU_RS27475	0.55	+1.3
6,111,580	+		PFLU_RS27475	0.55	-0.3
6,111,580	+		PFLU_RS27475	0.55	-0.7
6,111,580	+		PFLU_RS27475	0.55	+1.0
6,111,581	-		PFLU_RS27475	0.55	-0.5
6,111,581	-		PFLU_RS27475	0.55	+0.7
6,111,581	-		PFLU_RS27475	0.55	+0.7
6,111,581	-		PFLU_RS27475	0.55	+0.3
6,111,581	-		PFLU_RS27475	0.55	-0.1
6,111,581	-		PFLU_RS27475	0.55	-1.1
6,111,632	+		PFLU_RS27475	0.61	+0.3
6,111,649	+		PFLU_RS27475	0.63	-0.3
6,111,649	+		PFLU_RS27475	0.63	-0.3
6,111,649	+		PFLU_RS27475	0.63	-0.1
6,111,649	+		PFLU_RS27475	0.63	+2.3
6,111,650	-		PFLU_RS27475	0.63	+0.3
6,111,650	-		PFLU_RS27475	0.63	+1.3
6,111,650	-		PFLU_RS27475	0.63	+0.7
6,111,733	+		PFLU_RS27475	0.73	-0.1
6,111,734	-		PFLU_RS27475	0.73	+1.3
6,111,904	+				-0.7
6,111,906	+				-0.5
6,111,906	+				-0.8
6,111,906	+				-0.9
6,111,906	+				+0.1
6,111,906	+				+0.7
6,111,906	+				-1.2
6,111,906	+				+1.0
6,111,906	+				-0.6
6,111,906	+				+0.3
6,111,906	+				+2.3
6,111,906	+				-1.3
6,111,906	+				+0.5
6,111,906	+				-1.8
6,111,907	-				+1.2
6,111,907	-				+0.7
6,111,907	-				-2.0
6,111,907	-				+0.7
6,111,907	-				+0.7
6,111,907	-				+1.5
6,111,907	-				-0.8
6,111,907	-				+0.7
6,111,907	-				-3.8
6,111,907	-				+0.5
6,111,907	-				-2.8
6,111,907	-				-1.1
6,111,907	-				-0.6
6,111,907	-				-2.7
6,111,937	-				-0.5
6,111,961	+				+0.2
6,111,961	+				-3.2
6,111,961	+				+0.8
6,111,961	+				+0.4
6,111,962	-				+0.9
6,111,962	-				-1.2
6,111,962	-				-0.2
6,111,962	-				+1.0
6,111,990	+				-0.1
6,111,990	+				+1.2
6,111,990	+				+1.1
6,112,063	+		PFLU_RS27480	0.27	-0.2
6,112,063	+		PFLU_RS27480	0.27	-0.6
6,112,063	+		PFLU_RS27480	0.27	-0.3
6,112,063	+		PFLU_RS27480	0.27	-1.0
6,112,064	-		PFLU_RS27480	0.28	-0.9
6,112,064	-		PFLU_RS27480	0.28	+1.1
6,112,064	-		PFLU_RS27480	0.28	-0.3
6,112,064	-		PFLU_RS27480	0.28	-0.5
6,112,064	-		PFLU_RS27480	0.28	+1.1
6,112,064	-		PFLU_RS27480	0.28	-0.3
6,112,064	-		PFLU_RS27480	0.28	+0.5
6,112,199	-		PFLU_RS27480	0.68	+0.9
6,112,199	-		PFLU_RS27480	0.68	-0.5
6,112,228	+		PFLU_RS27480	0.77	+0.1
6,112,228	+		PFLU_RS27480	0.77	-0.9
6,112,228	+		PFLU_RS27480	0.77	+0.2
6,112,228	+		PFLU_RS27480	0.77	+0.4
6,112,228	+		PFLU_RS27480	0.77	-0.1
6,112,228	+		PFLU_RS27480	0.77	-0.7
6,112,228	+		PFLU_RS27480	0.77	+1.4
6,112,229	-		PFLU_RS27480	0.78	-0.5
6,112,229	-		PFLU_RS27480	0.78	+0.6
6,112,229	-		PFLU_RS27480	0.78	-1.1
6,112,229	-		PFLU_RS27480	0.78	-0.3
6,112,229	-		PFLU_RS27480	0.78	+0.9
6,112,229	-		PFLU_RS27480	0.78	-0.2
6,112,229	-		PFLU_RS27480	0.78	+0.3
6,112,230	+		PFLU_RS27480	0.78	-2.3
6,112,230	+		PFLU_RS27480	0.78	-0.5
6,112,230	+		PFLU_RS27480	0.78	+1.6
6,112,231	-		PFLU_RS27480	0.78	+0.4
6,112,267	+		PFLU_RS27480	0.89	+2.1
6,112,267	+		PFLU_RS27480	0.89	+0.7
6,112,268	-		PFLU_RS27480	0.89	-3.2
6,112,268	-		PFLU_RS27480	0.89	+0.6
6,112,268	-		PFLU_RS27480	0.89	-1.8
6,112,268	-		PFLU_RS27480	0.89	+0.6
6,112,374	+				-0.5
6,112,374	+				+1.6
6,112,374	+				-0.3
6,112,374	+				+0.6
6,112,374	+				+1.5
6,112,374	+				-0.6
6,112,374	+				-1.0
6,112,374	+				+0.3
6,112,374	+				+2.3
6,112,374	+				-0.8
6,112,374	+				+1.2
6,112,374	+				+0.5
6,112,374	+				+0.8
6,112,375	-				-2.4
6,112,375	-				+0.7
6,112,375	-				+0.6
6,112,375	-				+1.3
6,112,375	-				+1.2
6,112,375	-				+1.5
6,112,375	-				-1.1
6,112,378	+				+0.7
6,112,378	+				-1.1
6,112,378	+				-0.4
6,112,378	+				-3.3
6,112,378	+				+1.7
6,112,378	+				-0.3
6,112,378	+				+0.7
6,112,378	+				+0.3
6,112,378	+				+1.3
6,112,379	-				+1.0
6,112,379	-				+0.2
6,112,379	-				+0.3
6,112,379	-				-1.4
6,112,379	-				-0.1
6,112,379	-				-0.9
6,112,379	-				+1.0
6,112,412	+				-1.9
6,112,412	+				+0.8
6,112,412	+				+0.0
6,112,413	-				+0.7
6,112,413	-				-0.2
6,112,413	-				-2.1
6,112,413	-				-1.4
6,112,413	-				-0.6
6,112,413	-				+1.0
6,112,413	-				+1.0
6,112,418	+				+0.8
6,112,419	-				+0.6
6,112,565	+				+0.0
6,112,566	-				+0.0
6,112,592	+				+0.5
6,112,592	+				-0.5
6,112,592	+				-0.2
6,112,592	+				+0.5
6,112,592	+				-0.5
6,112,592	+				+2.1
6,112,593	-				-2.0
6,112,593	-				+2.8
6,112,593	-				+0.3
6,112,593	-				-1.3
6,112,593	-				+2.6
6,112,593	-				-0.1
6,112,656	+				-0.6
6,112,656	+				+0.5
6,112,656	+				+0.7
6,112,656	+				-3.2
6,112,682	+				-0.1
6,112,689	+				-0.1
6,112,689	+				-3.3
6,112,689	+				+1.4
6,112,689	+				+2.1
6,112,689	+				-0.2
6,112,690	-				-0.5
6,112,690	-				-0.4
6,112,690	-				-1.7
6,112,690	-				-1.2
6,112,690	-				+0.5
6,112,775	-				+0.8
6,112,857	+		PFLU_RS27485	0.14	-1.5
6,112,857	+		PFLU_RS27485	0.14	-2.4
6,112,858	-		PFLU_RS27485	0.14	+1.3
6,112,858	-		PFLU_RS27485	0.14	+3.1
6,112,905	+		PFLU_RS27485	0.17	+0.3
6,112,906	-		PFLU_RS27485	0.17	+0.3