Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS26490

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
5,921,361	+				-0.3
5,921,390	+				-3.6
5,921,391	-				-2.2
5,921,391	-				+1.2
5,921,416	+				-2.0
5,921,416	+				+0.4
5,921,417	-				+1.3
5,921,418	+				+2.7
5,921,418	+				+0.9
5,921,419	-				+0.5
5,921,465	+				+1.6
5,921,465	+				+1.3
5,921,466	-				-1.6
5,921,466	-				+0.8
5,921,477	+				+1.7
5,921,477	+				-0.1
5,921,477	+				+0.5
5,921,477	+				+0.4
5,921,477	+				-0.2
5,921,477	+				+0.9
5,921,477	+				+0.5
5,921,477	+				+1.1
5,921,477	+				+0.3
5,921,477	+				+0.8
5,921,477	+				-3.3
5,921,477	+				-0.6
5,921,477	+				-1.8
5,921,477	+				-1.7
5,921,477	+				-0.1
5,921,477	+				-0.1
5,921,477	+				+0.5
5,921,477	+				+1.6
5,921,477	+				-2.3
5,921,477	+				+0.5
5,921,477	+				-0.1
5,921,477	+				+0.0
5,921,478	-				+1.2
5,921,478	-				-1.1
5,921,478	-				-0.1
5,921,478	-				+0.5
5,921,478	-				-0.7
5,921,478	-				-0.4
5,921,478	-				+0.9
5,921,478	-				+1.8
5,921,478	-				+0.5
5,921,478	-				+2.0
5,921,478	-				+1.7
5,921,478	-				+1.1
5,921,478	-				-0.9
5,921,478	-				+0.9
5,921,478	-				+0.6
5,921,478	-				-2.6
5,921,478	-				+0.6
5,921,478	-				-0.4
5,921,478	-				+0.8
5,921,478	-				-2.6
5,921,478	-				+0.9
5,921,478	-				+0.8
5,921,478	-				+0.8
5,921,478	-				+0.6
5,921,479	+				+0.2
5,921,479	+				-2.8
5,921,479	+				-3.6
5,921,479	+				+0.9
5,921,479	+				-2.5
5,921,479	+				+0.7
5,921,479	+				+0.9
5,921,479	+				+0.9
5,921,479	+				+0.1
5,921,479	+				+0.6
5,921,479	+				+0.2
5,921,479	+				-1.3
5,921,479	+				+0.2
5,921,479	+				-0.3
5,921,479	+				+0.5
5,921,479	+				+0.3
5,921,479	+				+0.5
5,921,479	+				+1.3
5,921,479	+				+1.2
5,921,480	-				+0.8
5,921,480	-				-1.9
5,921,480	-				+0.1
5,921,480	-				-1.8
5,921,480	-				-2.6
5,921,480	-				+4.0
5,921,480	-				-0.1
5,921,480	-				+1.3
5,921,480	-				-1.6
5,921,480	-				+0.4
5,921,480	-				+0.4
5,921,480	-				-0.8
5,921,480	-				-1.3
5,921,480	-				+1.5
5,921,480	-				+0.2
5,921,480	-				-1.0
5,921,480	-				-0.5
5,921,480	-				+0.9
5,921,480	-				+1.7
5,921,480	-				-1.9
5,921,480	-				-3.2
5,921,480	-				+0.2
5,921,481	+				+0.5
5,921,481	+				+0.5
5,921,481	+				-0.2
5,921,481	+				-1.6
5,921,481	+				-2.5
5,921,481	+				+2.2
5,921,481	+				-0.0
5,921,481	+				+1.1
5,921,481	+				+1.5
5,921,481	+				+2.0
5,921,481	+				-1.1
5,921,481	+				-1.5
5,921,481	+				-1.9
5,921,481	+				-0.9
5,921,481	+				-0.4
5,921,481	+				+1.4
5,921,481	+				+0.6
5,921,481	+				+1.2
5,921,481	+				-0.0
5,921,481	+				-0.7
5,921,481	+				-0.6
5,921,481	+				+1.5
5,921,481	+				+0.1
5,921,481	+				-0.8
5,921,481	+				+0.7
5,921,481	+				-0.2
5,921,481	+				+0.1
5,921,481	+				-1.9
5,921,481	+				+0.0
5,921,481	+				-0.9
5,921,481	+				+1.7
5,921,481	+				+0.3
5,921,481	+				-1.7
5,921,481	+				+1.0
5,921,481	+				-3.0
5,921,482	-				+0.2
5,921,482	-				+1.6
5,921,482	-				-1.3
5,921,482	-				-0.7
5,921,482	-				-0.7
5,921,482	-				-1.8
5,921,482	-				+2.5
5,921,482	-				-1.5
5,921,482	-				+0.3
5,921,482	-				-0.2
5,921,482	-				-1.2
5,921,482	-				+0.5
5,921,482	-				+0.4
5,921,482	-				-1.5
5,921,482	-				+0.4
5,921,674	+		PFLU_RS26485	0.38	-0.4
5,921,674	+		PFLU_RS26485	0.38	+0.8
5,921,674	+		PFLU_RS26485	0.38	+0.3
5,921,674	+		PFLU_RS26485	0.38	-1.8
5,921,674	+		PFLU_RS26485	0.38	+1.0
5,921,675	-		PFLU_RS26485	0.38	-3.8
5,921,675	-		PFLU_RS26485	0.38	-1.9
5,921,943	+				-0.1
5,921,943	+				+0.5
5,921,944	-				-1.2
5,921,944	-				-0.2
5,921,944	-				+1.2
5,922,021	+				+0.1
5,922,021	+				+0.5
5,922,022	-				+0.5
5,922,022	-				-0.8
5,922,022	-				-2.9
5,922,022	-				+1.6
5,922,022	-				+0.4
5,922,133	+		PFLU_RS26490	0.21	-1.1
5,922,254	-		PFLU_RS26490	0.35	-1.0
5,922,296	+		PFLU_RS26490	0.39	-1.0
5,922,514	+		PFLU_RS26490	0.64	-1.4
5,922,515	-		PFLU_RS26490	0.64	-1.0
5,922,772	+				+1.2
5,922,829	-				-0.2
5,922,829	-				-2.4
5,922,835	+				-0.2
5,922,835	+				+0.7
5,922,835	+				-0.7
5,922,835	+				-0.2
5,922,835	+				+1.4
5,922,835	+				-0.7
5,922,835	+				-0.4
5,922,836	-				-2.0
5,922,836	-				+0.9
5,922,838	+				-1.9
5,922,838	+				+1.4
5,922,838	+				-1.2
5,922,838	+				-1.7
5,922,838	+				-3.6
5,922,838	+				-2.2
5,922,839	-				+0.8
5,922,839	-				-2.1
5,922,839	-				-0.1
5,922,919	+				+0.1
5,922,919	+				+2.1
5,922,920	-				-1.3
5,922,920	-				+0.8
5,922,920	-				+2.1
5,922,920	-				-1.2
5,922,967	+		PFLU_RS26495	0.12	-2.3
5,922,977	-		PFLU_RS26495	0.13	-1.8
5,923,037	-		PFLU_RS26495	0.19	+3.5
5,923,043	+		PFLU_RS26495	0.19	+2.8
5,923,043	+		PFLU_RS26495	0.19	-2.3
5,923,043	+		PFLU_RS26495	0.19	-0.4
5,923,043	+		PFLU_RS26495	0.19	+1.5
5,923,043	+		PFLU_RS26495	0.19	-2.5
5,923,044	-		PFLU_RS26495	0.20	+0.7
5,923,044	-		PFLU_RS26495	0.20	+1.3
5,923,044	-		PFLU_RS26495	0.20	+0.7
5,923,044	-		PFLU_RS26495	0.20	-1.0
5,923,055	+		PFLU_RS26495	0.21	-2.6
5,923,055	+		PFLU_RS26495	0.21	-1.7
5,923,055	+		PFLU_RS26495	0.21	-1.0
5,923,056	-		PFLU_RS26495	0.21	+1.1
5,923,099	+		PFLU_RS26495	0.25	-0.6
5,923,099	+		PFLU_RS26495	0.25	-0.8
5,923,099	+		PFLU_RS26495	0.25	+0.8
5,923,099	+		PFLU_RS26495	0.25	+0.9
5,923,099	+		PFLU_RS26495	0.25	+1.1
5,923,099	+		PFLU_RS26495	0.25	-0.1
5,923,100	-		PFLU_RS26495	0.25	-1.0
5,923,100	-		PFLU_RS26495	0.25	+1.5
5,923,100	-		PFLU_RS26495	0.25	+0.5
5,923,100	-		PFLU_RS26495	0.25	+1.5
5,923,100	-		PFLU_RS26495	0.25	-2.2
5,923,100	-		PFLU_RS26495	0.25	+1.9
5,923,120	+		PFLU_RS26495	0.27	-0.5
5,923,120	+		PFLU_RS26495	0.27	-0.3
5,923,121	-		PFLU_RS26495	0.27	-0.9
5,923,121	-		PFLU_RS26495	0.27	+1.4
5,923,121	-		PFLU_RS26495	0.27	-1.8
5,923,121	-		PFLU_RS26495	0.27	-1.9
5,923,121	-		PFLU_RS26495	0.27	+0.2
5,923,121	-		PFLU_RS26495	0.27	-2.4
5,923,121	-		PFLU_RS26495	0.27	+0.5
5,923,121	-		PFLU_RS26495	0.27	+0.3
5,923,126	+		PFLU_RS26495	0.27	+2.4
5,923,126	+		PFLU_RS26495	0.27	+0.3
5,923,126	+		PFLU_RS26495	0.27	-2.9
5,923,126	+		PFLU_RS26495	0.27	-1.5
5,923,126	+		PFLU_RS26495	0.27	+0.4
5,923,126	+		PFLU_RS26495	0.27	+1.5
5,923,126	+		PFLU_RS26495	0.27	-1.1
5,923,126	+		PFLU_RS26495	0.27	-0.2
5,923,126	+		PFLU_RS26495	0.27	-0.2
5,923,126	+		PFLU_RS26495	0.27	+0.2
5,923,126	+		PFLU_RS26495	0.27	-0.7
5,923,126	+		PFLU_RS26495	0.27	+2.0
5,923,126	+		PFLU_RS26495	0.27	-0.7
5,923,126	+		PFLU_RS26495	0.27	+2.0
5,923,126	+		PFLU_RS26495	0.27	-0.2
5,923,127	-		PFLU_RS26495	0.27	+0.7
5,923,127	-		PFLU_RS26495	0.27	+0.5
5,923,127	-		PFLU_RS26495	0.27	+0.8
5,923,127	-		PFLU_RS26495	0.27	-2.0
5,923,127	-		PFLU_RS26495	0.27	-0.1
5,923,127	-		PFLU_RS26495	0.27	-2.7
5,923,127	-		PFLU_RS26495	0.27	-0.7
5,923,127	-		PFLU_RS26495	0.27	-1.0
5,923,127	-		PFLU_RS26495	0.27	-0.5
5,923,127	-		PFLU_RS26495	0.27	-1.9
5,923,127	-		PFLU_RS26495	0.27	+0.1
5,923,127	-		PFLU_RS26495	0.27	+0.8
5,923,129	+		PFLU_RS26495	0.27	+0.1
5,923,129	+		PFLU_RS26495	0.27	+1.2
5,923,129	+		PFLU_RS26495	0.27	+0.1
5,923,129	+		PFLU_RS26495	0.27	-0.6
5,923,129	+		PFLU_RS26495	0.27	-1.3
5,923,129	+		PFLU_RS26495	0.27	+0.1
5,923,129	+		PFLU_RS26495	0.27	-0.8
5,923,129	+		PFLU_RS26495	0.27	-2.0
5,923,129	+		PFLU_RS26495	0.27	+0.5
5,923,129	+		PFLU_RS26495	0.27	+0.3
5,923,129	+		PFLU_RS26495	0.27	-1.1
5,923,129	+		PFLU_RS26495	0.27	+2.3
5,923,129	+		PFLU_RS26495	0.27	-0.1
5,923,129	+		PFLU_RS26495	0.27	-1.0
5,923,130	-		PFLU_RS26495	0.28	+0.4
5,923,130	-		PFLU_RS26495	0.28	+1.1
5,923,130	-		PFLU_RS26495	0.28	-0.8
5,923,130	-		PFLU_RS26495	0.28	+0.5
5,923,130	-		PFLU_RS26495	0.28	+0.8
5,923,130	-		PFLU_RS26495	0.28	+2.2
5,923,130	-		PFLU_RS26495	0.28	+1.0
5,923,183	+		PFLU_RS26495	0.32	-0.7
5,923,183	+		PFLU_RS26495	0.32	+0.9
5,923,184	-		PFLU_RS26495	0.33	+0.3
5,923,184	-		PFLU_RS26495	0.33	+1.6
5,923,184	-		PFLU_RS26495	0.33	-2.3
5,923,184	-		PFLU_RS26495	0.33	+0.5
5,923,184	-		PFLU_RS26495	0.33	+1.0
5,923,213	+		PFLU_RS26495	0.35	-1.0
5,923,234	+		PFLU_RS26495	0.37	-1.3
5,923,234	+		PFLU_RS26495	0.37	-1.0
5,923,234	+		PFLU_RS26495	0.37	-0.5
5,923,234	+		PFLU_RS26495	0.37	+0.5
5,923,234	+		PFLU_RS26495	0.37	-1.1
5,923,234	+		PFLU_RS26495	0.37	-0.7
5,923,234	+		PFLU_RS26495	0.37	+0.4
5,923,235	-		PFLU_RS26495	0.37	-0.2
5,923,235	-		PFLU_RS26495	0.37	-1.9
5,923,235	-		PFLU_RS26495	0.37	-0.3
5,923,235	-		PFLU_RS26495	0.37	+0.1
5,923,235	-		PFLU_RS26495	0.37	-1.8
5,923,235	-		PFLU_RS26495	0.37	-0.1
5,923,235	-		PFLU_RS26495	0.37	-1.7
5,923,235	-		PFLU_RS26495	0.37	+0.1
5,923,235	-		PFLU_RS26495	0.37	+0.4
5,923,235	-		PFLU_RS26495	0.37	+2.3
5,923,235	-		PFLU_RS26495	0.37	-0.2
5,923,273	+		PFLU_RS26495	0.41	+1.9
5,923,273	+		PFLU_RS26495	0.41	-1.0
5,923,273	+		PFLU_RS26495	0.41	-0.3
5,923,273	+		PFLU_RS26495	0.41	-3.5
5,923,274	-		PFLU_RS26495	0.41	-1.7
5,923,274	-		PFLU_RS26495	0.41	-1.9
5,923,279	+		PFLU_RS26495	0.41	+0.4
5,923,279	+		PFLU_RS26495	0.41	+1.1
5,923,279	+		PFLU_RS26495	0.41	-0.3
5,923,279	+		PFLU_RS26495	0.41	+0.2
5,923,279	+		PFLU_RS26495	0.41	+0.4
5,923,279	+		PFLU_RS26495	0.41	-2.3
5,923,279	+		PFLU_RS26495	0.41	-1.5
5,923,279	+		PFLU_RS26495	0.41	+0.5
5,923,279	+		PFLU_RS26495	0.41	+2.1
5,923,279	+		PFLU_RS26495	0.41	-0.2
5,923,280	-		PFLU_RS26495	0.42	-3.6
5,923,280	-		PFLU_RS26495	0.42	-0.3
5,923,280	-		PFLU_RS26495	0.42	-0.4
5,923,480	+		PFLU_RS26495	0.60	+0.2
5,923,481	-		PFLU_RS26495	0.60	-2.5
5,923,483	+		PFLU_RS26495	0.60	-0.3
5,923,484	-		PFLU_RS26495	0.61	+2.1
5,923,484	-		PFLU_RS26495	0.61	+0.6
5,923,484	-		PFLU_RS26495	0.61	-2.4
5,923,484	-		PFLU_RS26495	0.61	+1.8
5,923,484	-		PFLU_RS26495	0.61	-3.5
5,923,544	+		PFLU_RS26495	0.66	-1.2
5,923,545	-		PFLU_RS26495	0.66	+0.5