Experiment: L-Arabinose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS25800 and PFLU_RS25805 are separated by 3 nucleotides PFLU_RS25805 and PFLU_RS25810 are separated by 159 nucleotides
PFLU_RS25800: PFLU_RS25800 - tRNA pseudouridine(55) synthase TruB, at 5,764,120 to 5,765,037
_RS25800
PFLU_RS25805: PFLU_RS25805 - 30S ribosome-binding factor RbfA, at 5,765,041 to 5,765,436
_RS25805
PFLU_RS25810: PFLU_RS25810 - translation initiation factor IF-2, at 5,765,596 to 5,768,121
_RS25810
Position (kb) 5765
5766 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5764.269 kb on - strand, within PFLU_RS25800 at 5764.269 kb on - strand, within PFLU_RS25800 at 5764.269 kb on - strand, within PFLU_RS25800 at 5764.451 kb on + strand, within PFLU_RS25800 at 5764.452 kb on - strand, within PFLU_RS25800 at 5764.480 kb on - strand, within PFLU_RS25800 at 5764.480 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.503 kb on - strand, within PFLU_RS25800 at 5764.575 kb on + strand, within PFLU_RS25800 at 5764.575 kb on + strand, within PFLU_RS25800 at 5764.576 kb on - strand, within PFLU_RS25800 at 5764.576 kb on - strand, within PFLU_RS25800 at 5764.576 kb on - strand, within PFLU_RS25800 at 5764.578 kb on + strand, within PFLU_RS25800 at 5764.578 kb on + strand, within PFLU_RS25800 at 5764.579 kb on - strand, within PFLU_RS25800 at 5764.603 kb on + strand, within PFLU_RS25800 at 5764.604 kb on - strand, within PFLU_RS25800 at 5764.628 kb on + strand, within PFLU_RS25800 at 5764.628 kb on + strand, within PFLU_RS25800 at 5764.629 kb on - strand, within PFLU_RS25800 at 5764.629 kb on - strand, within PFLU_RS25800 at 5764.629 kb on - strand, within PFLU_RS25800 at 5764.629 kb on - strand, within PFLU_RS25800 at 5764.661 kb on + strand, within PFLU_RS25800 at 5764.662 kb on - strand, within PFLU_RS25800 at 5764.835 kb on + strand, within PFLU_RS25800 at 5764.835 kb on + strand, within PFLU_RS25800 at 5764.835 kb on + strand, within PFLU_RS25800 at 5764.836 kb on - strand, within PFLU_RS25800 at 5765.019 kb on + strand at 5765.020 kb on - strand at 5765.129 kb on - strand, within PFLU_RS25805 at 5765.129 kb on - strand, within PFLU_RS25805 at 5765.129 kb on - strand, within PFLU_RS25805 at 5765.129 kb on - strand, within PFLU_RS25805 at 5765.200 kb on - strand, within PFLU_RS25805 at 5765.424 kb on - strand at 5765.424 kb on - strand at 5765.445 kb on - strand at 5765.445 kb on - strand at 5765.598 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arabinose (C) remove 5,764,269 - PFLU_RS25800 0.16 -1.4 5,764,269 - PFLU_RS25800 0.16 +0.5 5,764,269 - PFLU_RS25800 0.16 -0.5 5,764,451 + PFLU_RS25800 0.36 +2.1 5,764,452 - PFLU_RS25800 0.36 -0.5 5,764,480 - PFLU_RS25800 0.39 -2.2 5,764,480 - PFLU_RS25800 0.39 +0.1 5,764,503 - PFLU_RS25800 0.42 +1.1 5,764,503 - PFLU_RS25800 0.42 -1.6 5,764,503 - PFLU_RS25800 0.42 -0.5 5,764,503 - PFLU_RS25800 0.42 -0.7 5,764,503 - PFLU_RS25800 0.42 -0.9 5,764,503 - PFLU_RS25800 0.42 +0.5 5,764,503 - PFLU_RS25800 0.42 -0.1 5,764,503 - PFLU_RS25800 0.42 +0.5 5,764,503 - PFLU_RS25800 0.42 +0.5 5,764,503 - PFLU_RS25800 0.42 -0.5 5,764,503 - PFLU_RS25800 0.42 -1.6 5,764,503 - PFLU_RS25800 0.42 -1.4 5,764,503 - PFLU_RS25800 0.42 +2.1 5,764,503 - PFLU_RS25800 0.42 -0.9 5,764,503 - PFLU_RS25800 0.42 -1.2 5,764,503 - PFLU_RS25800 0.42 -0.5 5,764,503 - PFLU_RS25800 0.42 +0.1 5,764,503 - PFLU_RS25800 0.42 +1.1 5,764,503 - PFLU_RS25800 0.42 +0.1 5,764,503 - PFLU_RS25800 0.42 +0.1 5,764,503 - PFLU_RS25800 0.42 -0.7 5,764,503 - PFLU_RS25800 0.42 -1.4 5,764,575 + PFLU_RS25800 0.50 +0.5 5,764,575 + PFLU_RS25800 0.50 +2.1 5,764,576 - PFLU_RS25800 0.50 +1.1 5,764,576 - PFLU_RS25800 0.50 -0.7 5,764,576 - PFLU_RS25800 0.50 +0.5 5,764,578 + PFLU_RS25800 0.50 -0.5 5,764,578 + PFLU_RS25800 0.50 -1.1 5,764,579 - PFLU_RS25800 0.50 -1.4 5,764,603 + PFLU_RS25800 0.53 -0.5 5,764,604 - PFLU_RS25800 0.53 +2.1 5,764,628 + PFLU_RS25800 0.55 -0.9 5,764,628 + PFLU_RS25800 0.55 -1.4 5,764,629 - PFLU_RS25800 0.55 +0.5 5,764,629 - PFLU_RS25800 0.55 +0.1 5,764,629 - PFLU_RS25800 0.55 +1.1 5,764,629 - PFLU_RS25800 0.55 +0.5 5,764,661 + PFLU_RS25800 0.59 -1.8 5,764,662 - PFLU_RS25800 0.59 +3.7 5,764,835 + PFLU_RS25800 0.78 +1.1 5,764,835 + PFLU_RS25800 0.78 -0.2 5,764,835 + PFLU_RS25800 0.78 +0.1 5,764,836 - PFLU_RS25800 0.78 +0.5 5,765,019 + -0.5 5,765,020 - -1.4 5,765,129 - PFLU_RS25805 0.22 -1.7 5,765,129 - PFLU_RS25805 0.22 +0.1 5,765,129 - PFLU_RS25805 0.22 -1.5 5,765,129 - PFLU_RS25805 0.22 -0.9 5,765,200 - PFLU_RS25805 0.40 +1.1 5,765,424 - -0.2 5,765,424 - -0.5 5,765,445 - -1.8 5,765,445 - +0.6 5,765,598 - -1.8
Or see this region's nucleotide sequence