Strain Fitness in Pseudomonas fluorescens SBW25 around PFLU_RS25715

Experiment: L-Arabinose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Arabinose (C)
5,739,873	+		PFLU_RS25710	0.46	-0.0
5,739,874	-		PFLU_RS25710	0.46	-0.3
5,739,888	+		PFLU_RS25710	0.47	-2.4
5,739,888	+		PFLU_RS25710	0.47	+0.7
5,739,888	+		PFLU_RS25710	0.47	-0.6
5,739,888	+		PFLU_RS25710	0.47	+3.1
5,739,889	-		PFLU_RS25710	0.47	+1.1
5,739,889	-		PFLU_RS25710	0.47	-2.7
5,740,225	+		PFLU_RS25710	0.76	+1.4
5,740,263	+		PFLU_RS25710	0.79	+0.1
5,740,263	+		PFLU_RS25710	0.79	-0.7
5,740,263	+		PFLU_RS25710	0.79	-1.2
5,740,263	+		PFLU_RS25710	0.79	+0.3
5,740,263	+		PFLU_RS25710	0.79	+0.0
5,740,264	-		PFLU_RS25710	0.79	+0.2
5,740,264	-		PFLU_RS25710	0.79	+0.1
5,740,264	-		PFLU_RS25710	0.79	+0.2
5,740,264	-		PFLU_RS25710	0.79	+0.6
5,740,264	-		PFLU_RS25710	0.79	+0.1
5,740,494	+				+0.7
5,740,494	+				-2.0
5,740,495	-				+3.3
5,740,495	-				-0.6
5,740,495	-				-1.5
5,740,509	-				-0.2
5,740,544	+				+0.3
5,740,544	+				+1.2
5,740,572	+				+1.3
5,740,572	+				+2.4
5,740,572	+				+0.1
5,740,572	+				-2.0
5,740,572	+				-1.3
5,740,572	+				+1.5
5,740,572	+				-0.0
5,740,572	+				+1.6
5,740,572	+				-2.0
5,740,572	+				+1.4
5,740,572	+				-1.5
5,740,572	+				-2.3
5,740,573	-				+1.4
5,740,573	-				+1.2
5,740,573	-				+0.7
5,740,573	-				+1.6
5,740,573	-				+0.3
5,740,573	-				+1.8
5,740,573	-				+1.0
5,740,573	-				-0.9
5,740,573	-				+1.0
5,740,573	-				-0.1
5,740,573	-				-1.0
5,740,573	-				-0.5
5,740,573	-				+1.2
5,740,624	-				+1.2
5,740,729	+				-2.3
5,740,730	-				-2.1
5,740,736	+				-2.8
5,740,736	+				-2.4
5,740,737	-				-1.6
5,740,803	+				+1.4
5,740,803	+				+0.1
5,740,803	+				-2.6
5,740,803	+				-1.6
5,740,803	+				-3.1
5,740,803	+				-0.4
5,740,804	-				-3.3
5,740,804	-				+0.2
5,740,804	-				+1.4
5,740,804	-				-3.1
5,740,823	+				-2.5
5,740,823	+				-2.3
5,740,823	+				-2.3
5,740,823	+				-3.0
5,740,823	+				-1.9
5,740,823	+				-1.3
5,740,824	-				-1.3
5,740,824	-				-2.6
5,740,824	-				-1.4
5,740,824	-				-3.2
5,740,824	-				-2.5
5,740,824	-				-2.3
5,740,824	-				-3.0
5,740,824	-				-1.7
5,740,824	-				-1.5
5,740,824	-				-2.1
5,740,879	+		PFLU_RS25715	0.12	-2.3
5,740,879	+		PFLU_RS25715	0.12	-1.5
5,740,879	+		PFLU_RS25715	0.12	-3.1
5,740,879	+		PFLU_RS25715	0.12	-2.6
5,740,879	+		PFLU_RS25715	0.12	-1.8
5,740,879	+		PFLU_RS25715	0.12	-1.5
5,740,880	-		PFLU_RS25715	0.12	+0.1
5,740,880	-		PFLU_RS25715	0.12	-0.7
5,740,880	-		PFLU_RS25715	0.12	-2.7
5,740,880	-		PFLU_RS25715	0.12	-1.4
5,740,903	+		PFLU_RS25715	0.17	+0.1
5,740,903	+		PFLU_RS25715	0.17	-0.7
5,740,903	+		PFLU_RS25715	0.17	-3.0
5,740,903	+		PFLU_RS25715	0.17	-2.9
5,740,903	+		PFLU_RS25715	0.17	-1.8
5,740,903	+		PFLU_RS25715	0.17	-2.0
5,740,903	+		PFLU_RS25715	0.17	-3.1
5,740,903	+		PFLU_RS25715	0.17	-1.4
5,740,903	+		PFLU_RS25715	0.17	-1.4
5,740,903	+		PFLU_RS25715	0.17	-3.2
5,740,903	+		PFLU_RS25715	0.17	-2.8
5,740,903	+		PFLU_RS25715	0.17	-3.6
5,740,903	+		PFLU_RS25715	0.17	-2.1
5,740,903	+		PFLU_RS25715	0.17	-1.8
5,740,903	+		PFLU_RS25715	0.17	-2.3
5,740,903	+		PFLU_RS25715	0.17	-1.5
5,740,903	+		PFLU_RS25715	0.17	+0.5
5,740,903	+		PFLU_RS25715	0.17	-1.1
5,740,904	-		PFLU_RS25715	0.17	+0.3
5,740,904	-		PFLU_RS25715	0.17	-2.9
5,740,904	-		PFLU_RS25715	0.17	-1.5
5,740,904	-		PFLU_RS25715	0.17	-2.7
5,740,904	-		PFLU_RS25715	0.17	-2.6
5,740,904	-		PFLU_RS25715	0.17	-3.1
5,740,904	-		PFLU_RS25715	0.17	-3.3
5,740,904	-		PFLU_RS25715	0.17	-2.6
5,740,904	-		PFLU_RS25715	0.17	-2.0
5,740,904	-		PFLU_RS25715	0.17	-1.1
5,740,904	-		PFLU_RS25715	0.17	-1.6
5,740,904	-		PFLU_RS25715	0.17	-2.1
5,740,904	-		PFLU_RS25715	0.17	+1.1
5,740,904	-		PFLU_RS25715	0.17	-1.5
5,740,904	-		PFLU_RS25715	0.17	-0.5
5,740,904	-		PFLU_RS25715	0.17	-1.3
5,740,904	-		PFLU_RS25715	0.17	-0.3
5,740,904	-		PFLU_RS25715	0.17	-1.3
5,740,904	-		PFLU_RS25715	0.17	-1.9
5,740,904	-		PFLU_RS25715	0.17	-1.5
5,740,904	-		PFLU_RS25715	0.17	-1.9
5,740,904	-		PFLU_RS25715	0.17	-1.7
5,740,939	-		PFLU_RS25715	0.25	-1.6
5,741,143	+		PFLU_RS25715	0.71	-1.5
5,741,143	+		PFLU_RS25715	0.71	-1.6
5,741,144	-		PFLU_RS25715	0.72	-2.0
5,741,219	+		PFLU_RS25715	0.89	-0.3
5,741,219	+		PFLU_RS25715	0.89	-0.9
5,741,219	+		PFLU_RS25715	0.89	-0.9
5,741,219	+		PFLU_RS25715	0.89	-0.3
5,741,220	-		PFLU_RS25715	0.89	-1.6
5,741,220	-		PFLU_RS25715	0.89	-0.7
5,741,266	+				-0.4
5,741,266	+				+2.6
5,741,266	+				-2.1
5,741,266	+				+1.3
5,741,266	+				-1.0
5,741,266	+				-1.7
5,741,267	-				+0.5
5,741,267	-				-3.5
5,741,267	-				-2.8
5,741,267	-				-2.8
5,741,267	-				-3.3
5,741,340	+				-0.6
5,741,340	+				+3.1
5,741,340	+				+1.9
5,741,341	-				-2.9
5,741,364	+				-2.8
5,741,364	+				-1.7
5,741,364	+				-0.6
5,741,364	+				-0.2
5,741,365	-				-3.2
5,741,365	-				-2.9
5,741,365	-				-3.4
5,741,365	-				-1.7
5,741,365	-				-1.4
5,741,365	-				-2.9
5,741,365	-				+0.9
5,741,365	-				-2.5
5,741,365	-				-1.7
5,741,368	+				+0.6
5,741,368	+				+1.0
5,741,368	+				-2.9
5,741,368	+				+0.3
5,741,368	+				-0.5
5,741,368	+				-1.6
5,741,368	+				+0.7
5,741,368	+				-0.7
5,741,368	+				-1.1
5,741,368	+				-1.3
5,741,368	+				-1.1
5,741,368	+				+0.1
5,741,368	+				+1.3
5,741,368	+				+0.3
5,741,368	+				-3.0
5,741,368	+				-1.6
5,741,368	+				-2.1
5,741,368	+				-1.5
5,741,368	+				-0.3
5,741,368	+				+0.4
5,741,368	+				-1.6
5,741,369	-				-1.4
5,741,369	-				-3.3
5,741,369	-				-2.1
5,741,369	-				-1.8
5,741,369	-				-3.5
5,741,369	-				-2.1
5,741,369	-				-1.6
5,741,369	-				-2.9
5,741,369	-				-3.3
5,741,369	-				-2.7
5,741,369	-				-2.0
5,741,369	-				-1.8
5,741,369	-				-1.3
5,741,369	-				-2.2
5,741,625	+		PFLU_RS25720	0.31	+3.0
5,741,625	+		PFLU_RS25720	0.31	-0.1
5,741,625	+		PFLU_RS25720	0.31	-1.1
5,741,625	+		PFLU_RS25720	0.31	-0.1
5,741,625	+		PFLU_RS25720	0.31	-1.1
5,741,625	+		PFLU_RS25720	0.31	+0.4
5,741,626	-		PFLU_RS25720	0.31	-2.0
5,741,626	-		PFLU_RS25720	0.31	-0.7
5,741,626	-		PFLU_RS25720	0.31	-1.4
5,741,626	-		PFLU_RS25720	0.31	-2.4
5,741,626	-		PFLU_RS25720	0.31	-3.2
5,741,626	-		PFLU_RS25720	0.31	-1.9
5,741,626	-		PFLU_RS25720	0.31	-1.6
5,741,647	+		PFLU_RS25720	0.33	-1.3
5,741,647	+		PFLU_RS25720	0.33	-1.3
5,741,647	+		PFLU_RS25720	0.33	+0.0
5,741,648	-		PFLU_RS25720	0.33	-0.9
5,741,648	-		PFLU_RS25720	0.33	-1.8
5,741,648	-		PFLU_RS25720	0.33	-1.3
5,741,667	+		PFLU_RS25720	0.35	-2.1
5,741,667	+		PFLU_RS25720	0.35	-1.1
5,741,667	+		PFLU_RS25720	0.35	-0.8
5,741,668	-		PFLU_RS25720	0.35	+3.5
5,741,668	-		PFLU_RS25720	0.35	-0.5
5,741,683	+		PFLU_RS25720	0.37	+1.2
5,741,683	+		PFLU_RS25720	0.37	-1.7
5,741,683	+		PFLU_RS25720	0.37	-1.1
5,741,683	+		PFLU_RS25720	0.37	+1.0
5,741,683	+		PFLU_RS25720	0.37	-0.7
5,741,683	+		PFLU_RS25720	0.37	+0.1
5,741,684	-		PFLU_RS25720	0.37	-1.8
5,741,684	-		PFLU_RS25720	0.37	-2.1
5,741,684	-		PFLU_RS25720	0.37	-2.6
5,741,691	+		PFLU_RS25720	0.38	-0.9
5,741,691	+		PFLU_RS25720	0.38	+0.6
5,741,692	-		PFLU_RS25720	0.38	+0.2
5,741,692	-		PFLU_RS25720	0.38	-0.9
5,741,695	+		PFLU_RS25720	0.39	-1.8
5,741,695	+		PFLU_RS25720	0.39	+0.5
5,741,696	-		PFLU_RS25720	0.39	-2.9
5,741,696	-		PFLU_RS25720	0.39	-2.9
5,741,696	-		PFLU_RS25720	0.39	-1.7
5,741,696	-		PFLU_RS25720	0.39	-1.4
5,741,696	-		PFLU_RS25720	0.39	-2.8
5,741,696	-		PFLU_RS25720	0.39	-2.5
5,741,696	-		PFLU_RS25720	0.39	+0.4
5,741,696	-		PFLU_RS25720	0.39	-2.2
5,741,696	-		PFLU_RS25720	0.39	-1.2
5,741,696	-		PFLU_RS25720	0.39	+0.5
5,741,696	-		PFLU_RS25720	0.39	-1.5
5,741,744	+		PFLU_RS25720	0.44	+0.1
5,741,745	-		PFLU_RS25720	0.44	-0.7
5,741,770	+		PFLU_RS25720	0.47	-0.8
5,741,770	+		PFLU_RS25720	0.47	-0.8
5,741,771	-		PFLU_RS25720	0.47	-3.8
5,741,771	-		PFLU_RS25720	0.47	-3.3
5,741,778	+		PFLU_RS25720	0.48	+0.4
5,741,860	+		PFLU_RS25720	0.57	-1.8
5,741,860	+		PFLU_RS25720	0.57	-1.0
5,741,860	+		PFLU_RS25720	0.57	-0.1
5,741,860	+		PFLU_RS25720	0.57	+2.4
5,741,860	+		PFLU_RS25720	0.57	+0.5
5,741,861	-		PFLU_RS25720	0.57	-3.2
5,741,861	-		PFLU_RS25720	0.57	-0.7
5,741,866	+		PFLU_RS25720	0.58	-0.4
5,741,866	+		PFLU_RS25720	0.58	-1.1
5,741,866	+		PFLU_RS25720	0.58	-2.1
5,741,866	+		PFLU_RS25720	0.58	-0.5
5,741,867	-		PFLU_RS25720	0.58	-3.1
5,741,867	-		PFLU_RS25720	0.58	-2.3
5,741,867	-		PFLU_RS25720	0.58	-0.5
5,741,959	+		PFLU_RS25720	0.68	-2.1
5,741,960	-		PFLU_RS25720	0.68	-3.0
5,742,050	-		PFLU_RS25720	0.78	+0.1
5,742,050	-		PFLU_RS25720	0.78	-2.7
5,742,092	+		PFLU_RS25720	0.83	+0.1
5,742,092	+		PFLU_RS25720	0.83	+1.5
5,742,093	-		PFLU_RS25720	0.83	-2.0
5,742,093	-		PFLU_RS25720	0.83	-0.9